RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 AMPHP49418 695 aa21.37■■□□□ 1.01
SNX29P1-201ENST00000548357 RTL1A6NKG5 1358 aa21.36■■□□□ 1.01
SNX29P1-201ENST00000548357 KCNQ4P56696 695 aa21.36■■□□□ 1.01
SNX29P1-201ENST00000548357 TMF1P82094 1093 aa21.36■■□□□ 1.01
SNX29P1-201ENST00000548357 SGIP1Q9BQI5 828 aa21.36■■□□□ 1.01
SNX29P1-201ENST00000548357 TAF1LQ8IZX4 1826 aa21.36■■□□□ 1.01
SNX29P1-201ENST00000548357 NBPF6Q5VWK0 638 aa21.35■■□□□ 1.01
SNX29P1-201ENST00000548357 NBPF4Q96M43 638 aa21.35■■□□□ 1.01
SNX29P1-201ENST00000548357 PKD1L3Q7Z443 1732 aa21.35■■□□□ 1.01
SNX29P1-201ENST00000548357 CHD4Q14839 1912 aa21.33■■□□□ 1.01
SNX29P1-201ENST00000548357 CARD14Q9BXL6 1004 aa21.33■■□□□ 1.01
SNX29P1-201ENST00000548357 C5P01031 1676 aa21.31■■□□□ 1
SNX29P1-201ENST00000548357 NSD3Q9BZ95 1437 aa21.31■■□□□ 1
SNX29P1-201ENST00000548357 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
SNX29P1-201ENST00000548357 HSP90AB2PQ58FF8 381 aa21.3■■□□□ 1
SNX29P1-201ENST00000548357 AKT1S1Q96B36 256 aa21.3■■□□□ 1
SNX29P1-201ENST00000548357 FHDC1Q9C0D6 1143 aaPredicted RBP21.3■■□□□ 1
SNX29P1-201ENST00000548357 MTFR1LQ9H019 292 aa21.3■■□□□ 1
SNX29P1-201ENST00000548357 YY1P25490 414 aa21.29■■□□□ 1
SNX29P1-201ENST00000548357 ZCRB1Q8TBF4 217 aaKnown RBP21.29■■□□□ 1
SNX29P1-201ENST00000548357 SYTL4Q96C24 671 aaPredicted RBP21.29■■□□□ 1
SNX29P1-201ENST00000548357 INSRP06213 1382 aa21.27■■□□□ 1
SNX29P1-201ENST00000548357 SLC24A1O60721 1099 aa21.27■■□□□ 1
SNX29P1-201ENST00000548357 EMILIN1Q9Y6C2 1016 aa21.27■■□□□ 1
SNX29P1-201ENST00000548357 PNPLA7Q6ZV29 1317 aa21.27■□□□□ 0.99
SNX29P1-201ENST00000548357 GOLGB1Q14789 3259 aaKnown RBP21.26■□□□□ 0.99
SNX29P1-201ENST00000548357 FLT4P35916 1363 aa21.26■□□□□ 0.99
SNX29P1-201ENST00000548357 SMG6Q86US8 1419 aaKnown RBP21.25■□□□□ 0.99
SNX29P1-201ENST00000548357 SYT17Q9BSW7 474 aa21.25■□□□□ 0.99
SNX29P1-201ENST00000548357 NCAPD2Q15021 1401 aa21.23■□□□□ 0.99
SNX29P1-201ENST00000548357 SLC27A3Q5K4L6 730 aa21.22■□□□□ 0.99
SNX29P1-201ENST00000548357 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
SNX29P1-201ENST00000548357 ARXQ96QS3 562 aa21.21■□□□□ 0.99
SNX29P1-201ENST00000548357 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
SNX29P1-201ENST00000548357 RAPGEF4Q8WZA2 1011 aa21.2■□□□□ 0.98
SNX29P1-201ENST00000548357 KIF24Q5T7B8 1368 aa21.2■□□□□ 0.98
SNX29P1-201ENST00000548357 C4BP0C0L5 1744 aa21.19■□□□□ 0.98
SNX29P1-201ENST00000548357 CYP27B1O15528 508 aa21.19■□□□□ 0.98
SNX29P1-201ENST00000548357 TATP17735 454 aaPredicted RBP21.19■□□□□ 0.98
SNX29P1-201ENST00000548357 CDCA8Q53HL2 280 aa21.19■□□□□ 0.98
SNX29P1-201ENST00000548357 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
SNX29P1-201ENST00000548357 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
SNX29P1-201ENST00000548357 MAP3K5Q99683 1374 aa21.17■□□□□ 0.98
SNX29P1-201ENST00000548357 PCDH11XQ9BZA7 1347 aa21.16■□□□□ 0.98
SNX29P1-201ENST00000548357 PCDH11YQ9BZA8 1340 aa21.16■□□□□ 0.98
SNX29P1-201ENST00000548357 TFCP2L1Q9NZI6 479 aa21.16■□□□□ 0.98
SNX29P1-201ENST00000548357 PPM1GO15355 546 aaPredicted RBP21.15■□□□□ 0.98
SNX29P1-201ENST00000548357 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
SNX29P1-201ENST00000548357 POLR3GLQ9BT43 218 aa21.14■□□□□ 0.97
SNX29P1-201ENST00000548357 PALLDQ8WX93 1383 aa21.13■□□□□ 0.97
SNX29P1-201ENST00000548357 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
SNX29P1-201ENST00000548357 COL23A1Q86Y22 540 aaPredicted RBP21.13■□□□□ 0.97
SNX29P1-201ENST00000548357 TIMELESSQ9UNS1 1208 aa21.13■□□□□ 0.97
SNX29P1-201ENST00000548357 KLHL34Q8N239 644 aa21.12■□□□□ 0.97
SNX29P1-201ENST00000548357 NLGN2Q8NFZ4 835 aa21.12■□□□□ 0.97
SNX29P1-201ENST00000548357 EYA1Q99502 592 aa21.12■□□□□ 0.97
SNX29P1-201ENST00000548357 POLKQ9UBT6 870 aa21.12■□□□□ 0.97
SNX29P1-201ENST00000548357 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
SNX29P1-201ENST00000548357 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
SNX29P1-201ENST00000548357 HSPA5P11021 654 aaKnown RBP21.11■□□□□ 0.97
SNX29P1-201ENST00000548357 MPRIPQ6WCQ1 1025 aa21.11■□□□□ 0.97
SNX29P1-201ENST00000548357 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
SNX29P1-201ENST00000548357 SLC16A10Q8TF71 515 aa21.11■□□□□ 0.97
SNX29P1-201ENST00000548357 TNNT2P45379 298 aaPredicted RBP21.1■□□□□ 0.97
SNX29P1-201ENST00000548357 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
SNX29P1-201ENST00000548357 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
SNX29P1-201ENST00000548357 EIF4A2Q14240 407 aaKnown RBP21.07■□□□□ 0.96
SNX29P1-201ENST00000548357 ZNF784Q8NCA9 323 aaPredicted RBP21.07■□□□□ 0.96
SNX29P1-201ENST00000548357 PIGBQ92521 554 aa21.07■□□□□ 0.96
SNX29P1-201ENST00000548357 MSH5O43196 834 aa21.06■□□□□ 0.96
SNX29P1-201ENST00000548357 POLD1P28340 1107 aa21.06■□□□□ 0.96
SNX29P1-201ENST00000548357 COL5A3P25940 1745 aaPredicted RBP21.06■□□□□ 0.96
SNX29P1-201ENST00000548357 NKX1-1Q15270 411 aaPredicted RBP21.05■□□□□ 0.96
SNX29P1-201ENST00000548357 MYH14Q7Z406 1995 aaKnown RBP21.03■□□□□ 0.96
SNX29P1-201ENST00000548357 PANK3Q9H999 370 aa21.03■□□□□ 0.96
SNX29P1-201ENST00000548357 GPR162Q16538 588 aa21.02■□□□□ 0.96
SNX29P1-201ENST00000548357 PELP1Q8IZL8 1130 aaKnown RBP21.02■□□□□ 0.96
SNX29P1-201ENST00000548357 LINC00116Q8NCU8 138 aa21.02■□□□□ 0.96
SNX29P1-201ENST00000548357 PHKG2P15735 406 aa21.01■□□□□ 0.95
SNX29P1-201ENST00000548357 YBX3P16989 372 aaKnown RBP eCLIP21.01■□□□□ 0.95
SNX29P1-201ENST00000548357 EIF4G2P78344 907 aaKnown RBP eCLIP21.01■□□□□ 0.95
SNX29P1-201ENST00000548357 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
SNX29P1-201ENST00000548357 SPG7Q9UQ90 795 aa21.01■□□□□ 0.95
SNX29P1-201ENST00000548357 IGSF1Q8N6C5 1336 aa21.01■□□□□ 0.95
SNX29P1-201ENST00000548357 KIAA1551Q9HCM1 1747 aa21.01■□□□□ 0.95
SNX29P1-201ENST00000548357 ITPK1Q13572 414 aa21■□□□□ 0.95
SNX29P1-201ENST00000548357 C4AP0C0L4 1744 aa21■□□□□ 0.95
SNX29P1-201ENST00000548357 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
SNX29P1-201ENST00000548357 ZNF831Q5JPB2 1677 aa20.99■□□□□ 0.95
SNX29P1-201ENST00000548357 PHF14O94880 888 aa20.99■□□□□ 0.95
SNX29P1-201ENST00000548357 KDM6AO15550 1401 aaPredicted RBP20.98■□□□□ 0.95
SNX29P1-201ENST00000548357 KDRP35968 1356 aa20.97■□□□□ 0.95
SNX29P1-201ENST00000548357 KIF13BQ9NQT8 1826 aa20.97■□□□□ 0.95
SNX29P1-201ENST00000548357 LOC102724428A0A0B4J2F2 783 aa20.97■□□□□ 0.95
SNX29P1-201ENST00000548357 SIK1P57059 783 aa20.97■□□□□ 0.95
SNX29P1-201ENST00000548357 SMARCC1Q92922 1105 aaPredicted RBP20.97■□□□□ 0.95
SNX29P1-201ENST00000548357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.97■□□□□ 0.95
SNX29P1-201ENST00000548357 N4BP2Q86UW6 1770 aaPredicted RBP20.97■□□□□ 0.95
SNX29P1-201ENST00000548357 TJP1Q07157 1748 aa20.96■□□□□ 0.95
SNX29P1-201ENST00000548357 AEBP1Q8IUX7 1158 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms