RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 KDF1Q8NAX2 398 aaPredicted RBP8.5□□□□□ -1.05
RPAP3-206ENST00000548296 CNTNAP3BQ96NU0 1288 aa8.5□□□□□ -1.05
RPAP3-206ENST00000548296 COL25A1Q9BXS0 654 aaPredicted RBP8.5□□□□□ -1.05
RPAP3-206ENST00000548296 CNTNAP3Q9BZ76 1288 aa8.5□□□□□ -1.05
RPAP3-206ENST00000548296 ESF1Q9H501 851 aaKnown RBP8.5□□□□□ -1.05
RPAP3-206ENST00000548296 GPC1P35052 558 aa8.49□□□□□ -1.05
RPAP3-206ENST00000548296 CDC14CA4D256 554 aa8.48□□□□□ -1.05
RPAP3-206ENST00000548296 ERVK-9P63128 1117 aa8.48□□□□□ -1.05
RPAP3-206ENST00000548296 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
RPAP3-206ENST00000548296 CC2D2BQ6DHV5 1058 aa8.48□□□□□ -1.05
RPAP3-206ENST00000548296 PRM3Q9NNZ6 103 aa8.48□□□□□ -1.05
RPAP3-206ENST00000548296 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
RPAP3-206ENST00000548296 KRT76Q01546 638 aa8.47□□□□□ -1.05
RPAP3-206ENST00000548296 GMCL1Q96IK5 515 aa8.47□□□□□ -1.05
RPAP3-206ENST00000548296 PRICKLE2Q7Z3G6 844 aa8.46□□□□□ -1.06
RPAP3-206ENST00000548296 CYP2U1Q7Z449 544 aa8.46□□□□□ -1.06
RPAP3-206ENST00000548296 MTMR14Q8NCE2 650 aa8.46□□□□□ -1.06
RPAP3-206ENST00000548296 NLRP3Q96P20 1036 aa8.46□□□□□ -1.06
RPAP3-206ENST00000548296 A0A1W2PRU2 124 aa8.45□□□□□ -1.06
RPAP3-206ENST00000548296 MEN1O00255 615 aa8.45□□□□□ -1.06
RPAP3-206ENST00000548296 FOXR1Q6PIV2 292 aa8.44□□□□□ -1.06
RPAP3-206ENST00000548296 RNF225M0QZC1 329 aaPredicted RBP8.43□□□□□ -1.06
RPAP3-206ENST00000548296 SLURP2P0DP57 97 aa8.43□□□□□ -1.06
RPAP3-206ENST00000548296 KCNMA1Q12791 1236 aa8.43□□□□□ -1.06
RPAP3-206ENST00000548296 SLC27A3Q5K4L6 730 aa8.43□□□□□ -1.06
RPAP3-206ENST00000548296 RNFT1Q5M7Z0 435 aa8.43□□□□□ -1.06
RPAP3-206ENST00000548296 PCDHB11Q9Y5F2 797 aa8.43□□□□□ -1.06
RPAP3-206ENST00000548296 FLIIQ13045 1269 aa8.42□□□□□ -1.06
RPAP3-206ENST00000548296 CLN3Q13286 438 aa8.42□□□□□ -1.06
RPAP3-206ENST00000548296 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
RPAP3-206ENST00000548296 ADAMTS8Q9UP79 889 aa8.42□□□□□ -1.06
RPAP3-206ENST00000548296 H7C1W4 665 aa8.41□□□□□ -1.06
RPAP3-206ENST00000548296 WDR44Q5JSH3 913 aa8.41□□□□□ -1.06
RPAP3-206ENST00000548296 TRIM22Q8IYM9 498 aa8.41□□□□□ -1.06
RPAP3-206ENST00000548296 SVOPQ8N4V2 548 aa8.41□□□□□ -1.06
RPAP3-206ENST00000548296 DYRK1BQ9Y463 629 aa8.41□□□□□ -1.06
RPAP3-206ENST00000548296 TRAK2O60296 914 aa8.4□□□□□ -1.06
RPAP3-206ENST00000548296 MYCP01106 439 aaPredicted RBP8.4□□□□□ -1.06
RPAP3-206ENST00000548296 GNRH1P01148 92 aa8.4□□□□□ -1.06
RPAP3-206ENST00000548296 RHOQP17081 205 aa8.4□□□□□ -1.06
RPAP3-206ENST00000548296 SRSF11Q05519 484 aaKnown RBP8.4□□□□□ -1.06
RPAP3-206ENST00000548296 ZNF385CQ66K41 422 aaPredicted RBP8.4□□□□□ -1.06
RPAP3-206ENST00000548296 GRIP2Q9C0E4 1043 aa8.4□□□□□ -1.06
RPAP3-206ENST00000548296 ZMYND15Q9H091 742 aa8.4□□□□□ -1.06
RPAP3-206ENST00000548296 CEP126Q9P2H0 1117 aa8.4□□□□□ -1.06
RPAP3-206ENST00000548296 GPR37L1O60883 481 aa8.39□□□□□ -1.07
RPAP3-206ENST00000548296 EIF4G2P78344 907 aaKnown RBP eCLIP8.39□□□□□ -1.07
RPAP3-206ENST00000548296 SPATA31C2B4DYI2 1134 aa8.38□□□□□ -1.07
RPAP3-206ENST00000548296 SCTRP47872 440 aa8.38□□□□□ -1.07
RPAP3-206ENST00000548296 POU4F2Q12837 409 aa8.38□□□□□ -1.07
RPAP3-206ENST00000548296 OSBPL3Q9H4L5 887 aa8.38□□□□□ -1.07
RPAP3-206ENST00000548296 CUEDC1Q9NWM3 386 aaPredicted RBP8.38□□□□□ -1.07
RPAP3-206ENST00000548296 ADAMTS2O95450 1211 aa8.37□□□□□ -1.07
RPAP3-206ENST00000548296 NBPF10Q6P3W6 841 aaKnown RBP8.37□□□□□ -1.07
RPAP3-206ENST00000548296 RIPOR1Q6ZS17 1223 aa8.37□□□□□ -1.07
RPAP3-206ENST00000548296 NBPF15Q8N660 670 aa8.37□□□□□ -1.07
RPAP3-206ENST00000548296 ENAMQ9NRM1 1142 aa8.37□□□□□ -1.07
RPAP3-206ENST00000548296 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
RPAP3-206ENST00000548296 MAP3K10Q02779 954 aa8.36□□□□□ -1.07
RPAP3-206ENST00000548296 TAS1R3Q7RTX0 852 aa8.36□□□□□ -1.07
RPAP3-206ENST00000548296 ZNF837Q96EG3 531 aaPredicted RBP8.36□□□□□ -1.07
RPAP3-206ENST00000548296 TRERF1Q96PN7 1200 aa8.36□□□□□ -1.07
RPAP3-206ENST00000548296 GAS2L1Q99501 681 aaPredicted RBP8.36□□□□□ -1.07
RPAP3-206ENST00000548296 ESYT1Q9BSJ8 1104 aa8.36□□□□□ -1.07
RPAP3-206ENST00000548296 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
RPAP3-206ENST00000548296 ARHGEF15O94989 841 aa8.35□□□□□ -1.07
RPAP3-206ENST00000548296 MARSP56192 900 aaKnown RBP8.35□□□□□ -1.07
RPAP3-206ENST00000548296 USP4Q13107 963 aa8.35□□□□□ -1.07
RPAP3-206ENST00000548296 DBN1Q16643 649 aa8.35□□□□□ -1.07
RPAP3-206ENST00000548296 TMEM151AQ8N4L1 468 aa8.35□□□□□ -1.07
RPAP3-206ENST00000548296 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
RPAP3-206ENST00000548296 ARXQ96QS3 562 aa8.35□□□□□ -1.07
RPAP3-206ENST00000548296 TIMMDC1Q9NPL8 285 aa8.35□□□□□ -1.07
RPAP3-206ENST00000548296 MBIPQ9NS73 344 aa8.35□□□□□ -1.07
RPAP3-206ENST00000548296 WASLO00401 505 aaPredicted RBP8.34□□□□□ -1.07
RPAP3-206ENST00000548296 GDF11O95390 407 aa8.34□□□□□ -1.07
RPAP3-206ENST00000548296 F11P03951 625 aa8.34□□□□□ -1.07
RPAP3-206ENST00000548296 RASSF7Q02833 373 aa8.34□□□□□ -1.07
RPAP3-206ENST00000548296 GAS6Q14393 721 aa8.34□□□□□ -1.07
RPAP3-206ENST00000548296 ESCO1Q5FWF5 840 aa8.34□□□□□ -1.07
RPAP3-206ENST00000548296 WHAMMQ8TF30 809 aa8.34□□□□□ -1.07
RPAP3-206ENST00000548296 SIRT1Q96EB6 747 aa8.34□□□□□ -1.07
RPAP3-206ENST00000548296 SCARF2Q96GP6 870 aaPredicted RBP8.34□□□□□ -1.07
RPAP3-206ENST00000548296 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
RPAP3-206ENST00000548296 TBC1D2BQ9UPU7 963 aa8.34□□□□□ -1.07
RPAP3-206ENST00000548296 CENPCQ03188 943 aa8.33□□□□□ -1.08
RPAP3-206ENST00000548296 SLFNL1Q499Z3 407 aa8.33□□□□□ -1.08
RPAP3-206ENST00000548296 GSK3AP49840 483 aa8.32□□□□□ -1.08
RPAP3-206ENST00000548296 MCM6Q14566 821 aa8.32□□□□□ -1.08
RPAP3-206ENST00000548296 LYPD4Q6UWN0 246 aa8.32□□□□□ -1.08
RPAP3-206ENST00000548296 XAGE2Q96GT9 111 aa8.32□□□□□ -1.08
RPAP3-206ENST00000548296 CCDC85AQ96PX6 553 aaPredicted RBP8.32□□□□□ -1.08
RPAP3-206ENST00000548296 SUPT5HO00267 1087 aaKnown RBP8.31□□□□□ -1.08
RPAP3-206ENST00000548296 CELA2BP08218 269 aaPredicted RBP8.31□□□□□ -1.08
RPAP3-206ENST00000548296 GNASQ5JWF2 1037 aa8.31□□□□□ -1.08
RPAP3-206ENST00000548296 KANK3Q6NY19 840 aa8.31□□□□□ -1.08
RPAP3-206ENST00000548296 GTPBP3Q969Y2 492 aaKnown RBP8.31□□□□□ -1.08
RPAP3-206ENST00000548296 ZSCAN10Q96SZ4 725 aaPredicted RBP8.31□□□□□ -1.08
RPAP3-206ENST00000548296 CDCA7Q9BWT1 371 aaPredicted RBP8.31□□□□□ -1.08
RPAP3-206ENST00000548296 RAB6BQ9NRW1 208 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms