RNA–Protein interactions for RNA: ENST00000548251.5

LETMD1-214, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-214ENST00000548251 SMIM5Q71RC9 77 aa11.11□□□□□ -0.63
LETMD1-214ENST00000548251 POLR3AO14802 1390 aaPredicted RBP11.11□□□□□ -0.63
LETMD1-214ENST00000548251 WNK3Q9BYP7 1800 aa11.1□□□□□ -0.63
LETMD1-214ENST00000548251 SMC1BQ8NDV3 1235 aa11.1□□□□□ -0.63
LETMD1-214ENST00000548251 COL18A1P39060 1754 aa11.09□□□□□ -0.63
LETMD1-214ENST00000548251 PLEKHG3A1L390 1219 aa11.09□□□□□ -0.63
LETMD1-214ENST00000548251 NLRP6P59044 892 aa11.09□□□□□ -0.63
LETMD1-214ENST00000548251 C9orf131Q5VYM1 1079 aa11.08□□□□□ -0.64
LETMD1-214ENST00000548251 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
LETMD1-214ENST00000548251 MON2Q7Z3U7 1717 aa11.07□□□□□ -0.64
LETMD1-214ENST00000548251 PDE4DIPQ5VU43 2346 aa11.07□□□□□ -0.64
LETMD1-214ENST00000548251 CCDC85CA6NKD9 419 aa11.07□□□□□ -0.64
LETMD1-214ENST00000548251 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
LETMD1-214ENST00000548251 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
LETMD1-214ENST00000548251 MKRN1Q9UHC7 482 aaKnown RBP11.07□□□□□ -0.64
LETMD1-214ENST00000548251 CCNL1Q9UK58 526 aaPredicted RBP11.07□□□□□ -0.64
LETMD1-214ENST00000548251 BCS1LQ9Y276 419 aa11.07□□□□□ -0.64
LETMD1-214ENST00000548251 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
LETMD1-214ENST00000548251 RGPD5Q99666 1765 aa11.07□□□□□ -0.64
LETMD1-214ENST00000548251 PPIP5K1Q6PFW1 1433 aa11.07□□□□□ -0.64
LETMD1-214ENST00000548251 KCPQ6ZWJ8 1503 aa11.06□□□□□ -0.64
LETMD1-214ENST00000548251 LBX1P52954 281 aa11.06□□□□□ -0.64
LETMD1-214ENST00000548251 SRPK2P78362 688 aaKnown RBP11.06□□□□□ -0.64
LETMD1-214ENST00000548251 ARHGEF25Q86VW2 580 aa11.06□□□□□ -0.64
LETMD1-214ENST00000548251 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-214ENST00000548251 A0A0G2JLW4 131 aa11.05□□□□□ -0.64
LETMD1-214ENST00000548251 CCER1Q8TC90 406 aaPredicted RBP11.05□□□□□ -0.64
LETMD1-214ENST00000548251 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
LETMD1-214ENST00000548251 ERBB3P21860 1342 aa11.05□□□□□ -0.64
LETMD1-214ENST00000548251 KDM2BQ8NHM5 1336 aa11.05□□□□□ -0.64
LETMD1-214ENST00000548251 CTCFP49711 727 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-214ENST00000548251 AMIGO3Q86WK7 504 aa11.04□□□□□ -0.64
LETMD1-214ENST00000548251 DDX54Q8TDD1 881 aaKnown RBP11.04□□□□□ -0.64
LETMD1-214ENST00000548251 CABP1Q9NZU7 370 aa11.04□□□□□ -0.64
LETMD1-214ENST00000548251 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
LETMD1-214ENST00000548251 CCDC7Q96M83 1385 aa11.03□□□□□ -0.64
LETMD1-214ENST00000548251 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
LETMD1-214ENST00000548251 SOX12O15370 315 aa11.03□□□□□ -0.64
LETMD1-214ENST00000548251 IL2RBP14784 551 aa11.03□□□□□ -0.64
LETMD1-214ENST00000548251 TESK2Q96S53 571 aa11.03□□□□□ -0.64
LETMD1-214ENST00000548251 NLRP2Q9NX02 1062 aa11.02□□□□□ -0.65
LETMD1-214ENST00000548251 USP47Q96K76 1375 aa11.02□□□□□ -0.65
LETMD1-214ENST00000548251 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
LETMD1-214ENST00000548251 ABCC6O95255 1503 aa11.01□□□□□ -0.65
LETMD1-214ENST00000548251 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
LETMD1-214ENST00000548251 TNRC18O15417 2968 aaPredicted RBP11.01□□□□□ -0.65
LETMD1-214ENST00000548251 CPSF1Q10570 1443 aaKnown RBP11.01□□□□□ -0.65
LETMD1-214ENST00000548251 FCHSD2O94868 740 aa11□□□□□ -0.65
LETMD1-214ENST00000548251 RNF181Q9P0P0 153 aa11□□□□□ -0.65
LETMD1-214ENST00000548251 EVC2Q86UK5 1308 aa11□□□□□ -0.65
LETMD1-214ENST00000548251 SLIT3O75094 1523 aa10.99□□□□□ -0.65
LETMD1-214ENST00000548251 AIDAQ96BJ3 306 aa10.99□□□□□ -0.65
LETMD1-214ENST00000548251 SLC12A5Q9H2X9 1139 aa10.99□□□□□ -0.65
LETMD1-214ENST00000548251 WBP1LQ9NX94 342 aa10.99□□□□□ -0.65
LETMD1-214ENST00000548251 NSD2O96028 1365 aa10.99□□□□□ -0.65
LETMD1-214ENST00000548251 SBNO2Q9Y2G9 1366 aa10.99□□□□□ -0.65
LETMD1-214ENST00000548251 PXDNLA1KZ92 1463 aa10.99□□□□□ -0.65
LETMD1-214ENST00000548251 LTN1O94822 1766 aa10.98□□□□□ -0.65
LETMD1-214ENST00000548251 VEGFAP15692 232 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-214ENST00000548251 DPEP1P16444 411 aa10.98□□□□□ -0.65
LETMD1-214ENST00000548251 TGFB2P61812 414 aa10.98□□□□□ -0.65
LETMD1-214ENST00000548251 PLEKHG2Q9H7P9 1386 aa10.98□□□□□ -0.65
LETMD1-214ENST00000548251 LY75O60449 1722 aa10.98□□□□□ -0.65
LETMD1-214ENST00000548251 PHF14O94880 888 aa10.97□□□□□ -0.65
LETMD1-214ENST00000548251 HSPA8P11142 646 aaKnown RBP10.97□□□□□ -0.65
LETMD1-214ENST00000548251 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
LETMD1-214ENST00000548251 RGPD2P0DJD1 1756 aa10.96□□□□□ -0.65
LETMD1-214ENST00000548251 N4BP2Q86UW6 1770 aaPredicted RBP10.96□□□□□ -0.65
LETMD1-214ENST00000548251 USP54Q70EL1 1684 aa10.96□□□□□ -0.65
LETMD1-214ENST00000548251 ANKRD36BQ8N2N9 1353 aa10.96□□□□□ -0.65
LETMD1-214ENST00000548251 CLSPNQ9HAW4 1339 aa10.96□□□□□ -0.65
LETMD1-214ENST00000548251 KCNA3P22001 575 aa10.96□□□□□ -0.65
LETMD1-214ENST00000548251 VEGFBP49765 207 aa10.96□□□□□ -0.65
LETMD1-214ENST00000548251 A0A1W2PP64 1363 aa10.95□□□□□ -0.66
LETMD1-214ENST00000548251 TTC21BQ7Z4L5 1316 aa10.95□□□□□ -0.66
LETMD1-214ENST00000548251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.95□□□□□ -0.66
LETMD1-214ENST00000548251 POTECB2RU33 542 aa10.95□□□□□ -0.66
LETMD1-214ENST00000548251 NME9Q86XW9 330 aa10.95□□□□□ -0.66
LETMD1-214ENST00000548251 KCNH5Q8NCM2 988 aa10.95□□□□□ -0.66
LETMD1-214ENST00000548251 TMC1Q8TDI8 760 aa10.95□□□□□ -0.66
LETMD1-214ENST00000548251 CFAP44Q96MT7 982 aa10.95□□□□□ -0.66
LETMD1-214ENST00000548251 KIF20BQ96Q89 1820 aa10.95□□□□□ -0.66
LETMD1-214ENST00000548251 NFAT5O94916 1531 aa10.94□□□□□ -0.66
LETMD1-214ENST00000548251 MMP10P09238 476 aa10.94□□□□□ -0.66
LETMD1-214ENST00000548251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.94□□□□□ -0.66
LETMD1-214ENST00000548251 CNTNAP1P78357 1384 aa10.93□□□□□ -0.66
LETMD1-214ENST00000548251 KTN1Q86UP2 1357 aaKnown RBP10.93□□□□□ -0.66
LETMD1-214ENST00000548251 HSPA5P11021 654 aaKnown RBP10.93□□□□□ -0.66
LETMD1-214ENST00000548251 FBLN1P23142 703 aa10.93□□□□□ -0.66
LETMD1-214ENST00000548251 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
LETMD1-214ENST00000548251 TNRC6CQ9HCJ0 1690 aaKnown RBP10.92□□□□□ -0.66
LETMD1-214ENST00000548251 GLTPD2A6NH11 291 aa10.92□□□□□ -0.66
LETMD1-214ENST00000548251 AK7Q96M32 723 aa10.92□□□□□ -0.66
LETMD1-214ENST00000548251 ANKRD24Q8TF21 1146 aa10.91□□□□□ -0.66
LETMD1-214ENST00000548251 DCAF5Q96JK2 942 aa10.91□□□□□ -0.66
LETMD1-214ENST00000548251 PKD1L3Q7Z443 1732 aa10.91□□□□□ -0.66
LETMD1-214ENST00000548251 SBF1O95248 1867 aa10.89□□□□□ -0.67
LETMD1-214ENST00000548251 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
LETMD1-214ENST00000548251 POTEJP0CG39 1038 aa10.89□□□□□ -0.67
LETMD1-214ENST00000548251 PIM2Q9P1W9 311 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms