RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 CRBNQ96SW2 442 aa17.61■□□□□ 0.41
SMPDL3B-205ENST00000548116 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
SMPDL3B-205ENST00000548116 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
SMPDL3B-205ENST00000548116 CHL1O00533 1208 aa17.6■□□□□ 0.41
SMPDL3B-205ENST00000548116 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
SMPDL3B-205ENST00000548116 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
SMPDL3B-205ENST00000548116 GNAT3A8MTJ3 354 aa17.59■□□□□ 0.41
SMPDL3B-205ENST00000548116 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
SMPDL3B-205ENST00000548116 BCL2L13Q9BXK5 485 aa17.59■□□□□ 0.41
SMPDL3B-205ENST00000548116 TSPYL6Q8N831 410 aa17.58■□□□□ 0.4
SMPDL3B-205ENST00000548116 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.4
SMPDL3B-205ENST00000548116 VAMP4O75379 141 aa17.57■□□□□ 0.4
SMPDL3B-205ENST00000548116 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
SMPDL3B-205ENST00000548116 PRDM11Q9NQV5 511 aa17.57■□□□□ 0.4
SMPDL3B-205ENST00000548116 C8orf58Q8NAV2 365 aa17.56■□□□□ 0.4
SMPDL3B-205ENST00000548116 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
SMPDL3B-205ENST00000548116 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
SMPDL3B-205ENST00000548116 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
SMPDL3B-205ENST00000548116 AMOTQ4VCS5 1084 aa17.55■□□□□ 0.4
SMPDL3B-205ENST00000548116 FRAT1Q92837 279 aaPredicted RBP17.55■□□□□ 0.4
SMPDL3B-205ENST00000548116 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
SMPDL3B-205ENST00000548116 CEMIPQ8WUJ3 1361 aa17.54■□□□□ 0.4
SMPDL3B-205ENST00000548116 HAP1P54257 671 aaPredicted RBP17.54■□□□□ 0.4
SMPDL3B-205ENST00000548116 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
SMPDL3B-205ENST00000548116 ZNF428Q96B54 188 aa17.54■□□□□ 0.4
SMPDL3B-205ENST00000548116 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 CSB-PGBD3P0DP91 1061 aa17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 TWISTNBQ3B726 338 aaPredicted RBP17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 CCDC136Q96JN2 1154 aa17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 COL5A2P05997 1499 aaPredicted RBP17.53■□□□□ 0.4
SMPDL3B-205ENST00000548116 MEGF6O75095 1541 aa17.52■□□□□ 0.4
SMPDL3B-205ENST00000548116 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
SMPDL3B-205ENST00000548116 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
SMPDL3B-205ENST00000548116 PANK1Q8TE04 598 aa17.52■□□□□ 0.4
SMPDL3B-205ENST00000548116 COL16A1Q07092 1604 aaPredicted RBP17.51■□□□□ 0.39
SMPDL3B-205ENST00000548116 RLBP1P12271 317 aa17.51■□□□□ 0.39
SMPDL3B-205ENST00000548116 BRPF1P55201 1214 aaPredicted RBP17.51■□□□□ 0.39
SMPDL3B-205ENST00000548116 WDR17Q8IZU2 1322 aa17.51■□□□□ 0.39
SMPDL3B-205ENST00000548116 PHLPP1O60346 1717 aa17.51■□□□□ 0.39
SMPDL3B-205ENST00000548116 LGR6Q9HBX8 967 aa17.51■□□□□ 0.39
SMPDL3B-205ENST00000548116 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
SMPDL3B-205ENST00000548116 TOM1O60784 492 aa17.5■□□□□ 0.39
SMPDL3B-205ENST00000548116 ZKSCAN2Q63HK3 967 aa17.5■□□□□ 0.39
SMPDL3B-205ENST00000548116 RAPGEF4Q8WZA2 1011 aa17.5■□□□□ 0.39
SMPDL3B-205ENST00000548116 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
SMPDL3B-205ENST00000548116 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
SMPDL3B-205ENST00000548116 PLEKHG2Q9H7P9 1386 aa17.49■□□□□ 0.39
SMPDL3B-205ENST00000548116 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
SMPDL3B-205ENST00000548116 TATP17735 454 aaPredicted RBP17.49■□□□□ 0.39
SMPDL3B-205ENST00000548116 TAF7Q15545 349 aaPredicted RBP17.49■□□□□ 0.39
SMPDL3B-205ENST00000548116 BABAM1Q9NWV8 329 aa17.49■□□□□ 0.39
SMPDL3B-205ENST00000548116 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
SMPDL3B-205ENST00000548116 COG6Q9Y2V7 657 aa17.48■□□□□ 0.39
SMPDL3B-205ENST00000548116 KIF16BQ96L93 1317 aa17.48■□□□□ 0.39
SMPDL3B-205ENST00000548116 TRIM27P14373 513 aa17.47■□□□□ 0.39
SMPDL3B-205ENST00000548116 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
SMPDL3B-205ENST00000548116 MPRIPQ6WCQ1 1025 aa17.47■□□□□ 0.39
SMPDL3B-205ENST00000548116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMPDL3B-205ENST00000548116 PKD1L3Q7Z443 1732 aa17.47■□□□□ 0.39
SMPDL3B-205ENST00000548116 OVOS2A0A0G2JMS6 1433 aa17.47■□□□□ 0.39
SMPDL3B-205ENST00000548116 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
SMPDL3B-205ENST00000548116 PIP4K2BP78356 416 aa17.47■□□□□ 0.39
SMPDL3B-205ENST00000548116 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
SMPDL3B-205ENST00000548116 CLUAP1Q96AJ1 413 aa17.46■□□□□ 0.39
SMPDL3B-205ENST00000548116 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
SMPDL3B-205ENST00000548116 TOM1L2Q6ZVM7 507 aa17.45■□□□□ 0.38
SMPDL3B-205ENST00000548116 COL14A1Q05707 1796 aaKnown RBP17.45■□□□□ 0.38
SMPDL3B-205ENST00000548116 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
SMPDL3B-205ENST00000548116 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
SMPDL3B-205ENST00000548116 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
SMPDL3B-205ENST00000548116 CARD10Q9BWT7 1032 aa17.45■□□□□ 0.38
SMPDL3B-205ENST00000548116 KDM3BQ7LBC6 1761 aa17.44■□□□□ 0.38
SMPDL3B-205ENST00000548116 SPG7Q9UQ90 795 aa17.44■□□□□ 0.38
SMPDL3B-205ENST00000548116 SIPA1L3O60292 1781 aaPredicted RBP17.44■□□□□ 0.38
SMPDL3B-205ENST00000548116 UBAP1LF5GYI3 381 aa17.43■□□□□ 0.38
SMPDL3B-205ENST00000548116 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
SMPDL3B-205ENST00000548116 PHKG2P15735 406 aa17.43■□□□□ 0.38
SMPDL3B-205ENST00000548116 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
SMPDL3B-205ENST00000548116 PARP4Q9UKK3 1724 aaKnown RBP17.43■□□□□ 0.38
SMPDL3B-205ENST00000548116 MS4A1P11836 297 aa17.43■□□□□ 0.38
SMPDL3B-205ENST00000548116 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
SMPDL3B-205ENST00000548116 KDM6AO15550 1401 aaPredicted RBP17.42■□□□□ 0.38
SMPDL3B-205ENST00000548116 SCN11AQ9UI33 1791 aa17.42■□□□□ 0.38
SMPDL3B-205ENST00000548116 CYP27B1O15528 508 aa17.42■□□□□ 0.38
SMPDL3B-205ENST00000548116 MVPQ14764 893 aaKnown RBP17.42■□□□□ 0.38
SMPDL3B-205ENST00000548116 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
SMPDL3B-205ENST00000548116 BTG4Q9NY30 223 aa17.42■□□□□ 0.38
SMPDL3B-205ENST00000548116 EVA1CP58658 441 aa17.41■□□□□ 0.38
SMPDL3B-205ENST00000548116 TEFQ10587 303 aa17.41■□□□□ 0.38
SMPDL3B-205ENST00000548116 IFNL2Q8IZJ0 200 aa17.4■□□□□ 0.38
SMPDL3B-205ENST00000548116 KCNQ3O43525 872 aa17.39■□□□□ 0.37
SMPDL3B-205ENST00000548116 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
SMPDL3B-205ENST00000548116 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.37
SMPDL3B-205ENST00000548116 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
SMPDL3B-205ENST00000548116 KDM2BQ8NHM5 1336 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms