RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
RAB5B-204ENST00000548068 GNAT3A8MTJ3 354 aa16.02■□□□□ 0.16
RAB5B-204ENST00000548068 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
RAB5B-204ENST00000548068 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
RAB5B-204ENST00000548068 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
RAB5B-204ENST00000548068 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
RAB5B-204ENST00000548068 OVOS2A0A0G2JMS6 1433 aa16.01■□□□□ 0.15
RAB5B-204ENST00000548068 PKD1L3Q7Z443 1732 aa16■□□□□ 0.15
RAB5B-204ENST00000548068 ZNF853P0CG23 659 aa16■□□□□ 0.15
RAB5B-204ENST00000548068 TSR2Q969E8 191 aaKnown RBP16■□□□□ 0.15
RAB5B-204ENST00000548068 ZNF428Q96B54 188 aa16■□□□□ 0.15
RAB5B-204ENST00000548068 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
RAB5B-204ENST00000548068 FAM83GA6ND36 823 aa15.99■□□□□ 0.15
RAB5B-204ENST00000548068 TATP17735 454 aaPredicted RBP15.99■□□□□ 0.15
RAB5B-204ENST00000548068 CERKQ8TCT0 537 aa15.99■□□□□ 0.15
RAB5B-204ENST00000548068 THUMPD2Q9BTF0 503 aaKnown RBP15.99■□□□□ 0.15
RAB5B-204ENST00000548068 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
RAB5B-204ENST00000548068 CRB1P82279 1406 aa15.98■□□□□ 0.15
RAB5B-204ENST00000548068 EXOSC9Q06265 439 aaKnown RBP15.98■□□□□ 0.15
RAB5B-204ENST00000548068 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
RAB5B-204ENST00000548068 C1orf141Q5JVX7 400 aa15.98■□□□□ 0.15
RAB5B-204ENST00000548068 ZNF530Q6P9A1 599 aaPredicted RBP15.98■□□□□ 0.15
RAB5B-204ENST00000548068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
RAB5B-204ENST00000548068 PLCH1Q4KWH8 1693 aa15.98■□□□□ 0.15
RAB5B-204ENST00000548068 IRX6P78412 446 aaPredicted RBP15.97■□□□□ 0.15
RAB5B-204ENST00000548068 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
RAB5B-204ENST00000548068 MCM10Q7L590 875 aa15.97■□□□□ 0.15
RAB5B-204ENST00000548068 BABAM1Q9NWV8 329 aa15.97■□□□□ 0.15
RAB5B-204ENST00000548068 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
RAB5B-204ENST00000548068 RARSP54136 660 aaKnown RBP15.96■□□□□ 0.15
RAB5B-204ENST00000548068 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
RAB5B-204ENST00000548068 MBIPQ9NS73 344 aa15.96■□□□□ 0.15
RAB5B-204ENST00000548068 ADAMTS7Q9UKP4 1686 aa15.95■□□□□ 0.14
RAB5B-204ENST00000548068 MEGF6O75095 1541 aa15.95■□□□□ 0.14
RAB5B-204ENST00000548068 CHL1O00533 1208 aa15.95■□□□□ 0.14
RAB5B-204ENST00000548068 EVA1CP58658 441 aa15.95■□□□□ 0.14
RAB5B-204ENST00000548068 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
RAB5B-204ENST00000548068 NWD2Q9ULI1 1742 aa15.94■□□□□ 0.14
RAB5B-204ENST00000548068 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
RAB5B-204ENST00000548068 ALDH1L2Q3SY69 923 aa15.94■□□□□ 0.14
RAB5B-204ENST00000548068 PPP4R2Q9NY27 417 aa15.94■□□□□ 0.14
RAB5B-204ENST00000548068 CEMIPQ8WUJ3 1361 aa15.94■□□□□ 0.14
RAB5B-204ENST00000548068 SCN11AQ9UI33 1791 aa15.93■□□□□ 0.14
RAB5B-204ENST00000548068 JCADQ9P266 1359 aa15.93■□□□□ 0.14
RAB5B-204ENST00000548068 NRAPQ86VF7 1730 aa15.92■□□□□ 0.14
RAB5B-204ENST00000548068 TSPYL4Q9UJ04 414 aa15.92■□□□□ 0.14
RAB5B-204ENST00000548068 KDM3BQ7LBC6 1761 aa15.92■□□□□ 0.14
RAB5B-204ENST00000548068 SOS1Q07889 1333 aaPredicted RBP15.92■□□□□ 0.14
RAB5B-204ENST00000548068 KIF16BQ96L93 1317 aa15.92■□□□□ 0.14
RAB5B-204ENST00000548068 WNK3Q9BYP7 1800 aa15.91■□□□□ 0.14
RAB5B-204ENST00000548068 SIPA1L3O60292 1781 aaPredicted RBP15.91■□□□□ 0.14
RAB5B-204ENST00000548068 BCAR3O75815 825 aa15.91■□□□□ 0.14
RAB5B-204ENST00000548068 MS4A1P11836 297 aa15.91■□□□□ 0.14
RAB5B-204ENST00000548068 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
RAB5B-204ENST00000548068 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
RAB5B-204ENST00000548068 SMC4Q9NTJ3 1288 aa15.91■□□□□ 0.14
RAB5B-204ENST00000548068 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
RAB5B-204ENST00000548068 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
RAB5B-204ENST00000548068 TEFQ10587 303 aa15.9■□□□□ 0.14
RAB5B-204ENST00000548068 PDE3AQ14432 1141 aa15.9■□□□□ 0.14
RAB5B-204ENST00000548068 TWISTNBQ3B726 338 aaPredicted RBP15.9■□□□□ 0.14
RAB5B-204ENST00000548068 IL17REQ8NFR9 667 aa15.9■□□□□ 0.14
RAB5B-204ENST00000548068 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
RAB5B-204ENST00000548068 PLIN1O60240 522 aa15.89■□□□□ 0.13
RAB5B-204ENST00000548068 IL2RBP14784 551 aa15.89■□□□□ 0.13
RAB5B-204ENST00000548068 IFNL2Q8IZJ0 200 aa15.89■□□□□ 0.13
RAB5B-204ENST00000548068 PCDH11XQ9BZA7 1347 aa15.89■□□□□ 0.13
RAB5B-204ENST00000548068 PCDH11YQ9BZA8 1340 aa15.89■□□□□ 0.13
RAB5B-204ENST00000548068 BRPF1P55201 1214 aaPredicted RBP15.88■□□□□ 0.13
RAB5B-204ENST00000548068 LARP1Q6PKG0 1096 aaKnown RBP15.88■□□□□ 0.13
RAB5B-204ENST00000548068 MRC1P22897 1456 aa15.87■□□□□ 0.13
RAB5B-204ENST00000548068 IPO8O15397 1037 aaKnown RBP15.87■□□□□ 0.13
RAB5B-204ENST00000548068 VAMP4O75379 141 aa15.87■□□□□ 0.13
RAB5B-204ENST00000548068 PHKG2P15735 406 aa15.87■□□□□ 0.13
RAB5B-204ENST00000548068 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
RAB5B-204ENST00000548068 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
RAB5B-204ENST00000548068 CHMP4AQ9BY43 222 aa15.87■□□□□ 0.13
RAB5B-204ENST00000548068 SPATA31A6Q5VVP1 1343 aa15.87■□□□□ 0.13
RAB5B-204ENST00000548068 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
RAB5B-204ENST00000548068 ZKSCAN2Q63HK3 967 aa15.86■□□□□ 0.13
RAB5B-204ENST00000548068 MPRIPQ6WCQ1 1025 aa15.86■□□□□ 0.13
RAB5B-204ENST00000548068 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
RAB5B-204ENST00000548068 C8orf58Q8NAV2 365 aa15.86■□□□□ 0.13
RAB5B-204ENST00000548068 ZCRB1Q8TBF4 217 aaKnown RBP15.86■□□□□ 0.13
RAB5B-204ENST00000548068 DCAF5Q96JK2 942 aa15.86■□□□□ 0.13
RAB5B-204ENST00000548068 NUTM2BA6NNL0 878 aaPredicted RBP15.85■□□□□ 0.13
RAB5B-204ENST00000548068 NUTM2EB1AL46 878 aaPredicted RBP15.85■□□□□ 0.13
RAB5B-204ENST00000548068 ADAMTS2O95450 1211 aa15.85■□□□□ 0.13
RAB5B-204ENST00000548068 NUTM2AQ8IVF1 878 aaPredicted RBP15.85■□□□□ 0.13
RAB5B-204ENST00000548068 BCL2L13Q9BXK5 485 aa15.85■□□□□ 0.13
RAB5B-204ENST00000548068 LGR6Q9HBX8 967 aa15.85■□□□□ 0.13
RAB5B-204ENST00000548068 CACNA1FO60840 1977 aa15.85■□□□□ 0.13
RAB5B-204ENST00000548068 SLIT2O94813 1529 aa15.84■□□□□ 0.13
RAB5B-204ENST00000548068 AAMPQ13685 434 aa15.84■□□□□ 0.13
RAB5B-204ENST00000548068 TSPYL6Q8N831 410 aa15.84■□□□□ 0.13
RAB5B-204ENST00000548068 EXOC6Q8TAG9 804 aa15.84■□□□□ 0.13
RAB5B-204ENST00000548068 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
RAB5B-204ENST00000548068 KDM6AO15550 1401 aaPredicted RBP15.84■□□□□ 0.13
RAB5B-204ENST00000548068 CDCA7Q9BWT1 371 aaPredicted RBP15.83■□□□□ 0.12
RAB5B-204ENST00000548068 THRAP3Q9Y2W1 955 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms