RNA–Protein interactions for RNA: ENST00000548025.5

MARF1-205, Transcript of meiosis regulator and mRNA stability factor 1, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARF1, Length 5,891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARF1-205	ENST00000548025	RIMS2	Q9UQ26	1411 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	TPM1	P09493	284 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	RBM6	P78332	1123 aa	Known RBP	12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	ANKRD24	Q8TF21	1146 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	PDZRN3	Q9UPQ7	1066 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	ZNF804A	Q7Z570	1209 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	CCDC146	Q8IYE0	955 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	TBX22	Q9Y458	520 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	ANKRD18B	A2A2Z9	1011 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	GLRX3	O76003	335 aa	Known RBP	12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	SULT6B1	Q6IMI4	303 aa		12.84	□□□□□ -0.35
MARF1-205	ENST00000548025	IBSP	P21815	317 aa	Predicted RBP	12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	MTMR7	Q9Y216	660 aa		12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	RGS3	P49796	1198 aa		12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	SLK	Q9H2G2	1235 aa	Predicted RBP	12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	PLCH2	O75038	1416 aa		12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	CLASRP	Q8N2M8	674 aa	Known RBP	12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	SPC25	Q9HBM1	224 aa		12.83	□□□□□ -0.36
MARF1-205	ENST00000548025	TTC21B	Q7Z4L5	1316 aa		12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	ALDH1B1	P30837	517 aa		12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	FAM98C	Q17RN3	349 aa	Known RBP	12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	SYAP1	Q96A49	352 aa	Predicted RBP	12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	SPON1	Q9HCB6	807 aa		12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	WDR97	A6NE52	1622 aa		12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	IVNS1ABP	Q9Y6Y0	642 aa		12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	TPM3	P06753	285 aa		12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	PLCB2	Q00722	1185 aa		12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	LARP1	Q6PKG0	1096 aa	Known RBP	12.82	□□□□□ -0.36
MARF1-205	ENST00000548025	KRT18	P05783	430 aa	Known RBP	12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	CREBRF	Q8IUR6	639 aa		12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	DCPS	Q96C86	337 aa	Known RBP	12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	TMOD4	Q9NZQ9	345 aa		12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	MATR3	P43243	847 aa	Known RBP eCLIP	12.81	□□□□□ -0.36	2e-10	■□□□□ 11.1
MARF1-205	ENST00000548025	TNPO1	Q92973	898 aa	Known RBP	12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	PICK1	Q9NRD5	415 aa		12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	ABT1	Q9ULW3	272 aa	Known RBP	12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	NEO1	Q92859	1461 aa		12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	NOD1	Q9Y239	953 aa		12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	METTL24	Q5JXM2	366 aa		12.81	□□□□□ -0.36
MARF1-205	ENST00000548025	ZFYVE16	Q7Z3T8	1539 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	PCDH11X	Q9BZA7	1347 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	PCDH11Y	Q9BZA8	1340 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	EPS15	P42566	896 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	CHRNA2	Q15822	529 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	ST18	O60284	1047 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	TXLNA	P40222	546 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	IDI1	Q13907	227 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	NSD3	Q9BZ95	1437 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	NEBL	O76041	1014 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	DRC7	Q8IY82	874 aa		12.8	□□□□□ -0.36
MARF1-205	ENST00000548025	PES1	O00541	588 aa	Known RBP	12.79	□□□□□ -0.36
MARF1-205	ENST00000548025	SH2D4A	Q9H788	454 aa		12.79	□□□□□ -0.36
MARF1-205	ENST00000548025	TRPM2	O94759	1503 aa		12.79	□□□□□ -0.36
MARF1-205	ENST00000548025	GNPAT	O15228	680 aa		12.79	□□□□□ -0.36
MARF1-205	ENST00000548025	IFIT5	Q13325	482 aa	Known RBP	12.79	□□□□□ -0.36
MARF1-205	ENST00000548025	GTF3C3	Q9Y5Q9	886 aa		12.79	□□□□□ -0.36
MARF1-205	ENST00000548025	LARGE2	Q8N3Y3	721 aa		12.79	□□□□□ -0.36
MARF1-205	ENST00000548025	LRRCC1	Q9C099	1032 aa		12.79	□□□□□ -0.36
MARF1-205	ENST00000548025	CCDC125	Q86Z20	511 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	ATP6V1D	Q9Y5K8	247 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	KDM6B	O15054	1643 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	NCBP1	Q09161	790 aa	Known RBP	12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	TRAPPC8	Q9Y2L5	1435 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	DHX37	Q8IY37	1157 aa	Known RBP	12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	RBM26	Q5T8P6	1007 aa	Known RBP	12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	FERMT2	Q96AC1	680 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	GPHN	Q9NQX3	736 aa	Predicted RBP	12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	DDX19B	Q9UMR2	479 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	KDM5B	Q9UGL1	1544 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	ANKRD18A	Q8IVF6	992 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	ANKRD2	Q9GZV1	360 aa		12.78	□□□□□ -0.36
MARF1-205	ENST00000548025	CNBD1	Q8NA66	436 aa		12.77	□□□□□ -0.36
MARF1-205	ENST00000548025	MAST3	O60307	1309 aa		12.77	□□□□□ -0.36
MARF1-205	ENST00000548025	PDE3A	Q14432	1141 aa		12.77	□□□□□ -0.36
MARF1-205	ENST00000548025	SRCIN1	Q9C0H9	1055 aa		12.77	□□□□□ -0.36
MARF1-205	ENST00000548025	KIF4A	O95239	1232 aa		12.77	□□□□□ -0.37
MARF1-205	ENST00000548025	MKNK2	Q9HBH9	465 aa		12.77	□□□□□ -0.37
MARF1-205	ENST00000548025	SEC63	Q9UGP8	760 aa	Known RBP	12.77	□□□□□ -0.37
MARF1-205	ENST00000548025	BRD4	O60885	1362 aa	Predicted RBP	12.77	□□□□□ -0.37
MARF1-205	ENST00000548025	CCT4	P50991	539 aa	Known RBP	12.77	□□□□□ -0.37
MARF1-205	ENST00000548025	ELMSAN1	Q6PJG2	1045 aa		12.77	□□□□□ -0.37
MARF1-205	ENST00000548025	TMEM106C	Q9BVX2	250 aa		12.77	□□□□□ -0.37
MARF1-205	ENST00000548025	KDM2B	Q8NHM5	1336 aa		12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	CCDC174	Q6PII3	467 aa		12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	VEZT	Q9HBM0	779 aa		12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	ANO2	Q9NQ90	1003 aa		12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	PDE4C	Q08493	712 aa		12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	CNTROB	Q8N137	903 aa		12.76	□□□□□ -0.37
MARF1-205	ENST00000548025		A0A0U1RQG5	324 aa	Predicted RBP	12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	TNNT3	P45378	269 aa	Predicted RBP	12.76	□□□□□ -0.37
MARF1-205	ENST00000548025	TDO2	P48775	406 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms