RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 SPON1Q9HCB6 807 aa29.72■■■□□ 2.35
USP44-204ENST00000547951 EIF4G2P78344 907 aaKnown RBP eCLIP29.71■■■□□ 2.35
USP44-204ENST00000547951 ZCRB1Q8TBF4 217 aaKnown RBP29.71■■■□□ 2.35
USP44-204ENST00000547951 ANKRD26Q9UPS8 1709 aa29.71■■■□□ 2.35
USP44-204ENST00000547951 SMG6Q86US8 1419 aaKnown RBP29.71■■■□□ 2.35
USP44-204ENST00000547951 SLC15A2Q16348 729 aa29.69■■■□□ 2.34
USP44-204ENST00000547951 STK32BQ9NY57 414 aa29.69■■■□□ 2.34
USP44-204ENST00000547951 MAP2P11137 1827 aaKnown RBP29.68■■■□□ 2.34
USP44-204ENST00000547951 LRRC4BQ9NT99 713 aa29.68■■■□□ 2.34
USP44-204ENST00000547951 NSD2O96028 1365 aa29.67■■■□□ 2.34
USP44-204ENST00000547951 KIF24Q5T7B8 1368 aa29.67■■■□□ 2.34
USP44-204ENST00000547951 ZBTB7AO95365 584 aa29.67■■■□□ 2.34
USP44-204ENST00000547951 PRIM1P49642 420 aaKnown RBP29.67■■■□□ 2.34
USP44-204ENST00000547951 CGNL1Q0VF96 1302 aa29.67■■■□□ 2.34
USP44-204ENST00000547951 SYTL4Q96C24 671 aaPredicted RBP29.66■■■□□ 2.34
USP44-204ENST00000547951 PPM1GO15355 546 aaPredicted RBP29.65■■■□□ 2.34
USP44-204ENST00000547951 ZNF827Q17R98 1081 aa29.64■■■□□ 2.34
USP44-204ENST00000547951 RAPGEF4Q8WZA2 1011 aa29.64■■■□□ 2.34
USP44-204ENST00000547951 KCNQ4P56696 695 aa29.63■■■□□ 2.33
USP44-204ENST00000547951 PPP1R1BQ9UD71 204 aaPredicted RBP29.62■■■□□ 2.33
USP44-204ENST00000547951 ATF5Q9Y2D1 282 aaPredicted RBP29.62■■■□□ 2.33
USP44-204ENST00000547951 TATP17735 454 aaPredicted RBP29.61■■■□□ 2.33
USP44-204ENST00000547951 TNNT2P45379 298 aaPredicted RBP29.6■■■□□ 2.33
USP44-204ENST00000547951 PANK3Q9H999 370 aa29.6■■■□□ 2.33
USP44-204ENST00000547951 POLKQ9UBT6 870 aa29.6■■■□□ 2.33
USP44-204ENST00000547951 LY75O60449 1722 aa29.59■■■□□ 2.33
USP44-204ENST00000547951 PTGER2P43116 358 aa29.59■■■□□ 2.33
USP44-204ENST00000547951 NCAPD2Q15021 1401 aa29.58■■■□□ 2.33
USP44-204ENST00000547951 PKD1L3Q7Z443 1732 aa29.57■■■□□ 2.32
USP44-204ENST00000547951 WASHC2AQ641Q2 1341 aa29.57■■■□□ 2.32
USP44-204ENST00000547951 TOGARAM1Q9Y4F4 1720 aa29.57■■■□□ 2.32
USP44-204ENST00000547951 TUBGCP6Q96RT7 1819 aa29.56■■■□□ 2.32
USP44-204ENST00000547951 CYP27B1O15528 508 aa29.55■■■□□ 2.32
USP44-204ENST00000547951 AKT1S1Q96B36 256 aa29.54■■■□□ 2.32
USP44-204ENST00000547951 EYA1Q99502 592 aa29.54■■■□□ 2.32
USP44-204ENST00000547951 PCDH11XQ9BZA7 1347 aa29.53■■■□□ 2.32
USP44-204ENST00000547951 PCDH11YQ9BZA8 1340 aa29.53■■■□□ 2.32
USP44-204ENST00000547951 SLC27A3Q5K4L6 730 aa29.53■■■□□ 2.32
USP44-204ENST00000547951 SGIP1Q9BQI5 828 aa29.51■■■□□ 2.31
USP44-204ENST00000547951 MTFR1LQ9H019 292 aa29.5■■■□□ 2.31
USP44-204ENST00000547951 ITGB4P16144 1822 aa29.5■■■□□ 2.31
USP44-204ENST00000547951 QSER1Q2KHR3 1735 aa29.49■■■□□ 2.31
USP44-204ENST00000547951 EIF4A2Q14240 407 aaKnown RBP29.49■■■□□ 2.31
USP44-204ENST00000547951 PNPLA7Q6ZV29 1317 aa29.46■■■□□ 2.31
USP44-204ENST00000547951 CCNL1Q9UK58 526 aaPredicted RBP29.46■■■□□ 2.31
USP44-204ENST00000547951 MPRIPQ6WCQ1 1025 aa29.45■■■□□ 2.31
USP44-204ENST00000547951 KIF7Q2M1P5 1343 aa29.43■■■□□ 2.3
USP44-204ENST00000547951 FHDC1Q9C0D6 1143 aaPredicted RBP29.42■■■□□ 2.3
USP44-204ENST00000547951 TFCP2L1Q9NZI6 479 aa29.42■■■□□ 2.3
USP44-204ENST00000547951 C5P01031 1676 aa29.41■■■□□ 2.3
USP44-204ENST00000547951 SPG7Q9UQ90 795 aa29.4■■■□□ 2.3
USP44-204ENST00000547951 PALLDQ8WX93 1383 aa29.39■■■□□ 2.3
USP44-204ENST00000547951 TAF1LQ8IZX4 1826 aa29.39■■■□□ 2.3
USP44-204ENST00000547951 NKX1-1Q15270 411 aaPredicted RBP29.39■■■□□ 2.3
USP44-204ENST00000547951 MORC1Q86VD1 984 aa29.39■■■□□ 2.3
USP44-204ENST00000547951 COL24A1Q17RW2 1714 aa29.38■■■□□ 2.29
USP44-204ENST00000547951 PIGBQ92521 554 aa29.38■■■□□ 2.29
USP44-204ENST00000547951 ARXQ96QS3 562 aa29.37■■■□□ 2.29
USP44-204ENST00000547951 SYT17Q9BSW7 474 aa29.37■■■□□ 2.29
USP44-204ENST00000547951 IGSF1Q8N6C5 1336 aa29.37■■■□□ 2.29
USP44-204ENST00000547951 KNSTRNQ9Y448 316 aa29.36■■■□□ 2.29
USP44-204ENST00000547951 PHKG2P15735 406 aa29.35■■■□□ 2.29
USP44-204ENST00000547951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.35■■■□□ 2.29
USP44-204ENST00000547951 AMER1Q5JTC6 1135 aaPredicted RBP29.34■■■□□ 2.29
USP44-204ENST00000547951 COL23A1Q86Y22 540 aaPredicted RBP29.33■■■□□ 2.29
USP44-204ENST00000547951 AEBP1Q8IUX7 1158 aa29.32■■■□□ 2.28
USP44-204ENST00000547951 SLC16A10Q8TF71 515 aa29.32■■■□□ 2.28
USP44-204ENST00000547951 UTRNP46939 3433 aa29.32■■■□□ 2.28
USP44-204ENST00000547951 IFNL2Q8IZJ0 200 aa29.31■■■□□ 2.28
USP44-204ENST00000547951 C4BP0C0L5 1744 aa29.3■■■□□ 2.28
USP44-204ENST00000547951 AMIGO3Q86WK7 504 aa29.29■■■□□ 2.28
USP44-204ENST00000547951 MSH5O43196 834 aa29.28■■■□□ 2.28
USP44-204ENST00000547951 SMIM5Q71RC9 77 aa29.28■■■□□ 2.28
USP44-204ENST00000547951 ASAP1Q9ULH1 1129 aa29.28■■■□□ 2.28
USP44-204ENST00000547951 YY1P25490 414 aa29.27■■■□□ 2.28
USP44-204ENST00000547951 SMARCC1Q92922 1105 aaPredicted RBP29.27■■■□□ 2.28
USP44-204ENST00000547951 TMOD3Q9NYL9 352 aa29.27■■■□□ 2.28
USP44-204ENST00000547951 DCAF8L1A6NGE4 600 aa29.26■■■□□ 2.27
USP44-204ENST00000547951 MSL1Q68DK7 614 aa29.26■■■□□ 2.27
USP44-204ENST00000547951 MAP3K5Q99683 1374 aa29.26■■■□□ 2.27
USP44-204ENST00000547951 PER1O15534 1290 aaPredicted RBP29.25■■■□□ 2.27
USP44-204ENST00000547951 KLHL34Q8N239 644 aa29.25■■■□□ 2.27
USP44-204ENST00000547951 POLD1P28340 1107 aa29.24■■■□□ 2.27
USP44-204ENST00000547951 UBR3Q6ZT12 1888 aa29.24■■■□□ 2.27
USP44-204ENST00000547951 LOC102724428A0A0B4J2F2 783 aa29.23■■■□□ 2.27
USP44-204ENST00000547951 IL13P35225 146 aa29.23■■■□□ 2.27
USP44-204ENST00000547951 SIK1P57059 783 aa29.23■■■□□ 2.27
USP44-204ENST00000547951 PLEKHG2Q9H7P9 1386 aa29.23■■■□□ 2.27
USP44-204ENST00000547951 KDM6AO15550 1401 aaPredicted RBP29.22■■■□□ 2.27
USP44-204ENST00000547951 ITPK1Q13572 414 aa29.22■■■□□ 2.27
USP44-204ENST00000547951 LINC00116Q8NCU8 138 aa29.22■■■□□ 2.27
USP44-204ENST00000547951 ATG3Q9NT62 314 aa29.22■■■□□ 2.27
USP44-204ENST00000547951 PLEKHO1Q53GL0 409 aaPredicted RBP29.21■■■□□ 2.27
USP44-204ENST00000547951 CC2D1BQ5T0F9 858 aaKnown RBP29.21■■■□□ 2.27
USP44-204ENST00000547951 SULT6B1Q6IMI4 303 aa29.21■■■□□ 2.27
USP44-204ENST00000547951 ZNF530Q6P9A1 599 aaPredicted RBP29.21■■■□□ 2.27
USP44-204ENST00000547951 MTHFSP49914 203 aa29.19■■■□□ 2.26
USP44-204ENST00000547951 KDRP35968 1356 aa29.18■■■□□ 2.26
USP44-204ENST00000547951 NLGN2Q8NFZ4 835 aa29.18■■■□□ 2.26
USP44-204ENST00000547951 AK7Q96M32 723 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms