RNA–Protein interactions for RNA: ENST00000547706.1

RPAP3-204, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 2

Gene RPAP3, Length 420 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-204ENST00000547706 ZCRB1Q8TBF4 217 aaKnown RBP18.94■□□□□ 0.62
RPAP3-204ENST00000547706 PKD1L3Q7Z443 1732 aa18.94■□□□□ 0.62
RPAP3-204ENST00000547706 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
RPAP3-204ENST00000547706 MEGF6O75095 1541 aa18.93■□□□□ 0.62
RPAP3-204ENST00000547706 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
RPAP3-204ENST00000547706 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
RPAP3-204ENST00000547706 MARCH10Q8NA82 808 aaPredicted RBP18.9■□□□□ 0.62
RPAP3-204ENST00000547706 SPG7Q9UQ90 795 aa18.9■□□□□ 0.62
RPAP3-204ENST00000547706 SHANK3Q9BYB0 1731 aa18.9■□□□□ 0.62
RPAP3-204ENST00000547706 PCDH11XQ9BZA7 1347 aa18.9■□□□□ 0.62
RPAP3-204ENST00000547706 PCDH11YQ9BZA8 1340 aa18.9■□□□□ 0.62
RPAP3-204ENST00000547706 KAT6BQ8WYB5 2073 aa18.89■□□□□ 0.62
RPAP3-204ENST00000547706 SULT6B1Q6IMI4 303 aa18.89■□□□□ 0.61
RPAP3-204ENST00000547706 UPF1Q92900 1129 aaKnown RBP eCLIP18.89■□□□□ 0.61
RPAP3-204ENST00000547706 ANP32CO43423 234 aa18.88■□□□□ 0.61
RPAP3-204ENST00000547706 PLEKHO1Q53GL0 409 aaPredicted RBP18.87■□□□□ 0.61
RPAP3-204ENST00000547706 U2SURPO15042 1029 aaKnown RBP18.85■□□□□ 0.61
RPAP3-204ENST00000547706 FCHSD2O94868 740 aa18.85■□□□□ 0.61
RPAP3-204ENST00000547706 SF3B2Q13435 895 aaKnown RBP18.85■□□□□ 0.61
RPAP3-204ENST00000547706 DDX54Q8TDD1 881 aaKnown RBP18.85■□□□□ 0.61
RPAP3-204ENST00000547706 AEBP1Q8IUX7 1158 aa18.84■□□□□ 0.61
RPAP3-204ENST00000547706 IFNL2Q8IZJ0 200 aa18.84■□□□□ 0.61
RPAP3-204ENST00000547706 PNNQ9H307 717 aaKnown RBP18.84■□□□□ 0.61
RPAP3-204ENST00000547706 NKX1-1Q15270 411 aaPredicted RBP18.83■□□□□ 0.6
RPAP3-204ENST00000547706 HSP90AB1P08238 724 aaKnown RBP18.82■□□□□ 0.6
RPAP3-204ENST00000547706 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
RPAP3-204ENST00000547706 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
RPAP3-204ENST00000547706 FAM182BQ5T319 152 aa18.82■□□□□ 0.6
RPAP3-204ENST00000547706 BCL11BQ9C0K0 894 aaPredicted RBP18.82■□□□□ 0.6
RPAP3-204ENST00000547706 NHSQ6T4R5 1651 aa18.82■□□□□ 0.6
RPAP3-204ENST00000547706 TNS1Q9HBL0 1735 aaKnown RBP18.81■□□□□ 0.6
RPAP3-204ENST00000547706 CYP27B1O15528 508 aa18.81■□□□□ 0.6
RPAP3-204ENST00000547706 HMOX1P09601 288 aa18.81■□□□□ 0.6
RPAP3-204ENST00000547706 RSPH6AQ9H0K4 717 aa18.8■□□□□ 0.6
RPAP3-204ENST00000547706 EP400Q96L91 3159 aa18.8■□□□□ 0.6
RPAP3-204ENST00000547706 TRIM37O94972 964 aa18.79■□□□□ 0.6
RPAP3-204ENST00000547706 PHKG2P15735 406 aa18.79■□□□□ 0.6
RPAP3-204ENST00000547706 BAG6P46379 1132 aa18.79■□□□□ 0.6
RPAP3-204ENST00000547706 RGPD3A6NKT7 1758 aaPredicted RBP18.78■□□□□ 0.6
RPAP3-204ENST00000547706 RGPD4Q7Z3J3 1758 aa18.78■□□□□ 0.6
RPAP3-204ENST00000547706 NEFMP07197 916 aa18.78■□□□□ 0.6
RPAP3-204ENST00000547706 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
RPAP3-204ENST00000547706 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
RPAP3-204ENST00000547706 AKAP4Q5JQC9 854 aa18.77■□□□□ 0.6
RPAP3-204ENST00000547706 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
RPAP3-204ENST00000547706 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.59
RPAP3-204ENST00000547706 ITGB4P16144 1822 aa18.77■□□□□ 0.59
RPAP3-204ENST00000547706 PLSCR1O15162 318 aa18.76■□□□□ 0.59
RPAP3-204ENST00000547706 PRKAR2BP31323 418 aa18.76■□□□□ 0.59
RPAP3-204ENST00000547706 DCAF5Q96JK2 942 aa18.76■□□□□ 0.59
RPAP3-204ENST00000547706 VIRMAQ69YN4 1812 aaKnown RBP18.75■□□□□ 0.59
RPAP3-204ENST00000547706 WDR43Q15061 677 aaKnown RBP eCLIP18.75■□□□□ 0.59
RPAP3-204ENST00000547706 SCN11AQ9UI33 1791 aa18.75■□□□□ 0.59
RPAP3-204ENST00000547706 BTAF1O14981 1849 aa18.74■□□□□ 0.59
RPAP3-204ENST00000547706 ERVV-2B6SEH9 535 aa18.74■□□□□ 0.59
RPAP3-204ENST00000547706 APBA3O96018 575 aa18.73■□□□□ 0.59
RPAP3-204ENST00000547706 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
RPAP3-204ENST00000547706 HMGB2P26583 209 aaKnown RBP18.72■□□□□ 0.59
RPAP3-204ENST00000547706 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
RPAP3-204ENST00000547706 ACSBG1Q96GR2 724 aa18.72■□□□□ 0.59
RPAP3-204ENST00000547706 TOGARAM1Q9Y4F4 1720 aa18.71■□□□□ 0.59
RPAP3-204ENST00000547706 ADAMTS7Q9UKP4 1686 aa18.71■□□□□ 0.59
RPAP3-204ENST00000547706 KCNQ2O43526 872 aa18.71■□□□□ 0.59
RPAP3-204ENST00000547706 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
RPAP3-204ENST00000547706 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
RPAP3-204ENST00000547706 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
RPAP3-204ENST00000547706 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
RPAP3-204ENST00000547706 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
RPAP3-204ENST00000547706 CAMKK2Q96RR4 588 aa18.69■□□□□ 0.58
RPAP3-204ENST00000547706 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
RPAP3-204ENST00000547706 KDM6AO15550 1401 aaPredicted RBP18.68■□□□□ 0.58
RPAP3-204ENST00000547706 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
RPAP3-204ENST00000547706 SYTL4Q96C24 671 aaPredicted RBP18.68■□□□□ 0.58
RPAP3-204ENST00000547706 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
RPAP3-204ENST00000547706 TMOD3Q9NYL9 352 aa18.68■□□□□ 0.58
RPAP3-204ENST00000547706 DLG5Q8TDM6 1919 aa18.68■□□□□ 0.58
RPAP3-204ENST00000547706 RREB1Q92766 1687 aa18.67■□□□□ 0.58
RPAP3-204ENST00000547706 LY75O60449 1722 aa18.67■□□□□ 0.58
RPAP3-204ENST00000547706 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
RPAP3-204ENST00000547706 DEFB132Q7Z7B7 95 aa18.67■□□□□ 0.58
RPAP3-204ENST00000547706 ADAMTS8Q9UP79 889 aa18.67■□□□□ 0.58
RPAP3-204ENST00000547706 RNMTO43148 476 aaKnown RBP18.66■□□□□ 0.58
RPAP3-204ENST00000547706 EN1Q05925 392 aaPredicted RBP18.66■□□□□ 0.58
RPAP3-204ENST00000547706 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
RPAP3-204ENST00000547706 RUNDC1Q96C34 613 aa18.66■□□□□ 0.58
RPAP3-204ENST00000547706 MRC1P22897 1456 aa18.65■□□□□ 0.58
RPAP3-204ENST00000547706 CCER2I3L3R5 266 aa18.65■□□□□ 0.58
RPAP3-204ENST00000547706 CABP4P57796 275 aa18.65■□□□□ 0.58
RPAP3-204ENST00000547706 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
RPAP3-204ENST00000547706 PTF1AQ7RTS3 328 aa18.65■□□□□ 0.58
RPAP3-204ENST00000547706 PNISRQ8TF01 805 aaKnown RBP18.65■□□□□ 0.58
RPAP3-204ENST00000547706 PIGBQ92521 554 aa18.65■□□□□ 0.58
RPAP3-204ENST00000547706 RTF1Q92541 710 aaKnown RBP18.65■□□□□ 0.58
RPAP3-204ENST00000547706 SLC27A3Q5K4L6 730 aa18.64■□□□□ 0.57
RPAP3-204ENST00000547706 CEMIPQ8WUJ3 1361 aa18.64■□□□□ 0.57
RPAP3-204ENST00000547706 SLC52A2Q9HAB3 445 aa18.63■□□□□ 0.57
RPAP3-204ENST00000547706 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
RPAP3-204ENST00000547706 EZH2Q15910 746 aaKnown RBP18.62■□□□□ 0.57
RPAP3-204ENST00000547706 CCDC184Q52MB2 194 aa18.62■□□□□ 0.57
RPAP3-204ENST00000547706 ZNF831Q5JPB2 1677 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms