RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CDCA7Q9BWT1 371 aaPredicted RBP20.8■□□□□ 0.92
TRAFD1-203ENST00000547063 SPG7Q9UQ90 795 aa20.8■□□□□ 0.92
TRAFD1-203ENST00000547063 AFF2P51816 1311 aa20.79■□□□□ 0.92
TRAFD1-203ENST00000547063 SPATA31A1Q5TZJ5 1347 aa20.79■□□□□ 0.92
TRAFD1-203ENST00000547063 NEUROD2Q15784 382 aa20.79■□□□□ 0.92
TRAFD1-203ENST00000547063 SPATA31A5Q5VU36 1347 aa20.78■□□□□ 0.92
TRAFD1-203ENST00000547063 SPATA31A7Q8IWB4 1347 aa20.78■□□□□ 0.92
TRAFD1-203ENST00000547063 USP35Q9P2H5 1018 aa20.78■□□□□ 0.92
TRAFD1-203ENST00000547063 RRP7AQ9Y3A4 280 aaKnown RBP20.78■□□□□ 0.92
TRAFD1-203ENST00000547063 CCDC9Q9Y3X0 531 aaKnown RBP20.78■□□□□ 0.92
TRAFD1-203ENST00000547063 OVOS2A0A0G2JMS6 1433 aa20.78■□□□□ 0.92
TRAFD1-203ENST00000547063 HTATSF1O43719 755 aaKnown RBP20.77■□□□□ 0.92
TRAFD1-203ENST00000547063 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
TRAFD1-203ENST00000547063 MTHFSDQ2M296 383 aaKnown RBP20.77■□□□□ 0.92
TRAFD1-203ENST00000547063 SALL2Q9Y467 1007 aaPredicted RBP20.77■□□□□ 0.92
TRAFD1-203ENST00000547063 MEGF6O75095 1541 aa20.77■□□□□ 0.92
TRAFD1-203ENST00000547063 CALD1Q05682 793 aaKnown RBP20.76■□□□□ 0.91
TRAFD1-203ENST00000547063 PKD1L3Q7Z443 1732 aa20.75■□□□□ 0.91
TRAFD1-203ENST00000547063 DLG5Q8TDM6 1919 aa20.75■□□□□ 0.91
TRAFD1-203ENST00000547063 C1orf141Q5JVX7 400 aa20.75■□□□□ 0.91
TRAFD1-203ENST00000547063 ZNF530Q6P9A1 599 aaPredicted RBP20.75■□□□□ 0.91
TRAFD1-203ENST00000547063 BARGINQ6ZT62 677 aa20.75■□□□□ 0.91
TRAFD1-203ENST00000547063 WWC1Q8IX03 1113 aa20.75■□□□□ 0.91
TRAFD1-203ENST00000547063 RTF1Q92541 710 aaKnown RBP20.75■□□□□ 0.91
TRAFD1-203ENST00000547063 TRPC5Q9UL62 973 aaPredicted RBP20.75■□□□□ 0.91
TRAFD1-203ENST00000547063 GNAT3A8MTJ3 354 aa20.74■□□□□ 0.91
TRAFD1-203ENST00000547063 WDR63Q8IWG1 891 aa20.74■□□□□ 0.91
TRAFD1-203ENST00000547063 ZNF521Q96K83 1311 aa20.74■□□□□ 0.91
TRAFD1-203ENST00000547063 WNK3Q9BYP7 1800 aa20.74■□□□□ 0.91
TRAFD1-203ENST00000547063 MAP3K5Q99683 1374 aa20.73■□□□□ 0.91
TRAFD1-203ENST00000547063 DISP2A7MBM2 1401 aa20.73■□□□□ 0.91
TRAFD1-203ENST00000547063 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
TRAFD1-203ENST00000547063 AKAP4Q5JQC9 854 aa20.73■□□□□ 0.91
TRAFD1-203ENST00000547063 ZCRB1Q8TBF4 217 aaKnown RBP20.73■□□□□ 0.91
TRAFD1-203ENST00000547063 CENPBP07199 599 aaPredicted RBP20.72■□□□□ 0.91
TRAFD1-203ENST00000547063 GOLGA2Q08379 1002 aa20.72■□□□□ 0.91
TRAFD1-203ENST00000547063 ZNF772Q68DY9 489 aaPredicted RBP20.72■□□□□ 0.91
TRAFD1-203ENST00000547063 TRIM35Q9UPQ4 493 aa20.72■□□□□ 0.91
TRAFD1-203ENST00000547063 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
TRAFD1-203ENST00000547063 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
TRAFD1-203ENST00000547063 ATRNO75882 1429 aa20.71■□□□□ 0.91
TRAFD1-203ENST00000547063 HSP90AB1P08238 724 aaKnown RBP20.71■□□□□ 0.91
TRAFD1-203ENST00000547063 IFNL2Q8IZJ0 200 aa20.71■□□□□ 0.91
TRAFD1-203ENST00000547063 IL16Q14005 1332 aa20.7■□□□□ 0.9
TRAFD1-203ENST00000547063 EXOC5O00471 708 aa20.69■□□□□ 0.9
TRAFD1-203ENST00000547063 GJD4Q96KN9 370 aaPredicted RBP20.69■□□□□ 0.9
TRAFD1-203ENST00000547063 QTRT2Q9H974 415 aaKnown RBP20.68■□□□□ 0.9
TRAFD1-203ENST00000547063 E9PSI1 815 aa20.67■□□□□ 0.9
TRAFD1-203ENST00000547063 PHKG2P15735 406 aa20.67■□□□□ 0.9
TRAFD1-203ENST00000547063 DDB1Q16531 1140 aa20.66■□□□□ 0.9
TRAFD1-203ENST00000547063 TNS2Q63HR2 1409 aa20.66■□□□□ 0.9
TRAFD1-203ENST00000547063 DCAF5Q96JK2 942 aa20.65■□□□□ 0.9
TRAFD1-203ENST00000547063 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
TRAFD1-203ENST00000547063 CYP27B1O15528 508 aa20.64■□□□□ 0.89
TRAFD1-203ENST00000547063 GNAI1P63096 354 aa20.64■□□□□ 0.89
TRAFD1-203ENST00000547063 FAM98CQ17RN3 349 aaKnown RBP20.64■□□□□ 0.89
TRAFD1-203ENST00000547063 MCM10Q7L590 875 aa20.64■□□□□ 0.89
TRAFD1-203ENST00000547063 GLI3P10071 1580 aa20.63■□□□□ 0.89
TRAFD1-203ENST00000547063 CEMIPQ8WUJ3 1361 aa20.63■□□□□ 0.89
TRAFD1-203ENST00000547063 SLFN5Q08AF3 891 aa20.63■□□□□ 0.89
TRAFD1-203ENST00000547063 DDX54Q8TDD1 881 aaKnown RBP20.63■□□□□ 0.89
TRAFD1-203ENST00000547063 IFT57Q9NWB7 429 aa20.63■□□□□ 0.89
TRAFD1-203ENST00000547063 SHANK3Q9BYB0 1731 aa20.63■□□□□ 0.89
TRAFD1-203ENST00000547063 ADAMTS7Q9UKP4 1686 aa20.62■□□□□ 0.89
TRAFD1-203ENST00000547063 RNMTO43148 476 aaKnown RBP20.62■□□□□ 0.89
TRAFD1-203ENST00000547063 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
TRAFD1-203ENST00000547063 NKX1-1Q15270 411 aaPredicted RBP20.62■□□□□ 0.89
TRAFD1-203ENST00000547063 LRRC37A3O60309 1634 aa20.62■□□□□ 0.89
TRAFD1-203ENST00000547063 A0A0G2JS52 829 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 ONECUT3O60422 494 aaPredicted RBP20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 MYT1Q01538 1121 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 TEFQ10587 303 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 MPRIPQ6WCQ1 1025 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 IL17REQ8NFR9 667 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 CFAP44Q96MT7 982 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 BABAM1Q9NWV8 329 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 SCN11AQ9UI33 1791 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 THSD7AQ9UPZ6 1657 aa20.61■□□□□ 0.89
TRAFD1-203ENST00000547063 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
TRAFD1-203ENST00000547063 RBM6P78332 1123 aaKnown RBP20.6■□□□□ 0.89
TRAFD1-203ENST00000547063 THUMPD2Q9BTF0 503 aaKnown RBP20.6■□□□□ 0.89
TRAFD1-203ENST00000547063 CDCA7LQ96GN5 454 aa20.59■□□□□ 0.89
TRAFD1-203ENST00000547063 TAF7Q15545 349 aaPredicted RBP20.58■□□□□ 0.89
TRAFD1-203ENST00000547063 ILDR1Q86SU0 546 aaPredicted RBP20.58■□□□□ 0.89
TRAFD1-203ENST00000547063 TRMT2AQ8IZ69 625 aaKnown RBP20.58■□□□□ 0.89
TRAFD1-203ENST00000547063 LGR6Q9HBX8 967 aa20.58■□□□□ 0.89
TRAFD1-203ENST00000547063 ERVV-2B6SEH9 535 aa20.57■□□□□ 0.88
TRAFD1-203ENST00000547063 KDM6AO15550 1401 aaPredicted RBP20.57■□□□□ 0.88
TRAFD1-203ENST00000547063 ZNF853P0CG23 659 aa20.57■□□□□ 0.88
TRAFD1-203ENST00000547063 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
TRAFD1-203ENST00000547063 CHL1O00533 1208 aa20.56■□□□□ 0.88
TRAFD1-203ENST00000547063 DUSP27Q5VZP5 1158 aa20.56■□□□□ 0.88
TRAFD1-203ENST00000547063 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
TRAFD1-203ENST00000547063 SPINK5Q9NQ38 1064 aaPredicted RBP20.55■□□□□ 0.88
TRAFD1-203ENST00000547063 MRC1P22897 1456 aa20.55■□□□□ 0.88
TRAFD1-203ENST00000547063 RXRBP28702 533 aa20.54■□□□□ 0.88
TRAFD1-203ENST00000547063 CABP4P57796 275 aa20.54■□□□□ 0.88
TRAFD1-203ENST00000547063 SEPT12Q8IYM1 358 aa20.54■□□□□ 0.88
TRAFD1-203ENST00000547063 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
TRAFD1-203ENST00000547063 TSPYL4Q9UJ04 414 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms