RNA–Protein interactions for RNA: ENST00000547052.1

BRF1-209, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-209ENST00000547052 SPG7Q9UQ90 795 aa23.91■■□□□ 1.42
BRF1-209ENST00000547052 MEGF6O75095 1541 aa23.9■■□□□ 1.42
BRF1-209ENST00000547052 SULT6B1Q6IMI4 303 aa23.9■■□□□ 1.42
BRF1-209ENST00000547052 FAM196AQ6ZSG2 479 aa23.89■■□□□ 1.41
BRF1-209ENST00000547052 ZCRB1Q8TBF4 217 aaKnown RBP23.89■■□□□ 1.41
BRF1-209ENST00000547052 PNNQ9H307 717 aaKnown RBP23.89■■□□□ 1.41
BRF1-209ENST00000547052 SHANK3Q9BYB0 1731 aa23.89■■□□□ 1.41
BRF1-209ENST00000547052 SBF2Q86WG5 1849 aa23.89■■□□□ 1.41
BRF1-209ENST00000547052 PCDH11XQ9BZA7 1347 aa23.88■■□□□ 1.41
BRF1-209ENST00000547052 PCDH11YQ9BZA8 1340 aa23.88■■□□□ 1.41
BRF1-209ENST00000547052 U2AF1L5P0DN76 240 aaPredicted RBP23.87■■□□□ 1.41
BRF1-209ENST00000547052 U2AF1Q01081 240 aaKnown RBP eCLIP23.87■■□□□ 1.41
BRF1-209ENST00000547052 PLEKHO1Q53GL0 409 aaPredicted RBP23.87■■□□□ 1.41
BRF1-209ENST00000547052 VIRMAQ69YN4 1812 aaKnown RBP23.87■■□□□ 1.41
BRF1-209ENST00000547052 SF3B2Q13435 895 aaKnown RBP23.86■■□□□ 1.41
BRF1-209ENST00000547052 WDR43Q15061 677 aaKnown RBP eCLIP23.86■■□□□ 1.41
BRF1-209ENST00000547052 AMOTQ4VCS5 1084 aa23.86■■□□□ 1.41
BRF1-209ENST00000547052 KDRP35968 1356 aa23.86■■□□□ 1.41
BRF1-209ENST00000547052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.85■■□□□ 1.41
BRF1-209ENST00000547052 HMOX1P09601 288 aa23.84■■□□□ 1.41
BRF1-209ENST00000547052 DDX54Q8TDD1 881 aaKnown RBP23.84■■□□□ 1.41
BRF1-209ENST00000547052 C1orf141Q5JVX7 400 aa23.82■■□□□ 1.4
BRF1-209ENST00000547052 CCDC125Q86Z20 511 aa23.81■■□□□ 1.4
BRF1-209ENST00000547052 DOT1LQ8TEK3 1739 aa23.81■■□□□ 1.4
BRF1-209ENST00000547052 HSP90AB1P08238 724 aaKnown RBP23.8■■□□□ 1.4
BRF1-209ENST00000547052 DIEXFQ68CQ4 756 aaKnown RBP23.8■■□□□ 1.4
BRF1-209ENST00000547052 AEBP1Q8IUX7 1158 aa23.8■■□□□ 1.4
BRF1-209ENST00000547052 FCHSD2O94868 740 aa23.79■■□□□ 1.4
BRF1-209ENST00000547052 IFNL2Q8IZJ0 200 aa23.78■■□□□ 1.4
BRF1-209ENST00000547052 MARCH10Q8NA82 808 aaPredicted RBP23.78■■□□□ 1.4
BRF1-209ENST00000547052 NHSQ6T4R5 1651 aa23.78■■□□□ 1.4
BRF1-209ENST00000547052 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
BRF1-209ENST00000547052 BCL9O00512 1426 aa23.77■■□□□ 1.4
BRF1-209ENST00000547052 ZNF530Q6P9A1 599 aaPredicted RBP23.77■■□□□ 1.4
BRF1-209ENST00000547052 ITGB4P16144 1822 aa23.77■■□□□ 1.4
BRF1-209ENST00000547052 FAM182BQ5T319 152 aa23.76■■□□□ 1.39
BRF1-209ENST00000547052 GAS2L2Q8NHY3 880 aa23.76■■□□□ 1.39
BRF1-209ENST00000547052 MRS2Q9HD23 443 aa23.76■■□□□ 1.39
BRF1-209ENST00000547052 SOCS7O14512 581 aa23.75■■□□□ 1.39
BRF1-209ENST00000547052 PRKAR2BP31323 418 aa23.75■■□□□ 1.39
BRF1-209ENST00000547052 TNS1Q9HBL0 1735 aaKnown RBP23.75■■□□□ 1.39
BRF1-209ENST00000547052 SCN11AQ9UI33 1791 aa23.75■■□□□ 1.39
BRF1-209ENST00000547052 DLG5Q8TDM6 1919 aa23.74■■□□□ 1.39
BRF1-209ENST00000547052 BTAF1O14981 1849 aa23.73■■□□□ 1.39
BRF1-209ENST00000547052 RSPH6AQ9H0K4 717 aa23.72■■□□□ 1.39
BRF1-209ENST00000547052 TRIM37O94972 964 aa23.71■■□□□ 1.39
BRF1-209ENST00000547052 BAG6P46379 1132 aa23.71■■□□□ 1.39
BRF1-209ENST00000547052 SYTL4Q96C24 671 aaPredicted RBP23.71■■□□□ 1.39
BRF1-209ENST00000547052 PHKG2P15735 406 aa23.7■■□□□ 1.38
BRF1-209ENST00000547052 AKAP4Q5JQC9 854 aa23.7■■□□□ 1.38
BRF1-209ENST00000547052 CYP27B1O15528 508 aa23.69■■□□□ 1.38
BRF1-209ENST00000547052 UPF1Q92900 1129 aaKnown RBP eCLIP23.69■■□□□ 1.38
BRF1-209ENST00000547052 DCAF5Q96JK2 942 aa23.69■■□□□ 1.38
BRF1-209ENST00000547052 RGPD3A6NKT7 1758 aaPredicted RBP23.69■■□□□ 1.38
BRF1-209ENST00000547052 RGPD4Q7Z3J3 1758 aa23.69■■□□□ 1.38
BRF1-209ENST00000547052 ACSBG1Q96GR2 724 aa23.68■■□□□ 1.38
BRF1-209ENST00000547052 BCL11BQ9C0K0 894 aaPredicted RBP23.68■■□□□ 1.38
BRF1-209ENST00000547052 RTF1Q92541 710 aaKnown RBP23.67■■□□□ 1.38
BRF1-209ENST00000547052 TOGARAM1Q9Y4F4 1720 aa23.67■■□□□ 1.38
BRF1-209ENST00000547052 NKX1-1Q15270 411 aaPredicted RBP23.66■■□□□ 1.38
BRF1-209ENST00000547052 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
BRF1-209ENST00000547052 EP400Q96L91 3159 aa23.65■■□□□ 1.38
BRF1-209ENST00000547052 GNAT3A8MTJ3 354 aa23.64■■□□□ 1.37
BRF1-209ENST00000547052 APBA3O96018 575 aa23.64■■□□□ 1.37
BRF1-209ENST00000547052 MTHFSDQ2M296 383 aaKnown RBP23.64■■□□□ 1.37
BRF1-209ENST00000547052 TMOD3Q9NYL9 352 aa23.64■■□□□ 1.37
BRF1-209ENST00000547052 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
BRF1-209ENST00000547052 ERVV-2B6SEH9 535 aa23.62■■□□□ 1.37
BRF1-209ENST00000547052 CCER2I3L3R5 266 aa23.62■■□□□ 1.37
BRF1-209ENST00000547052 HMGB2P26583 209 aaKnown RBP23.62■■□□□ 1.37
BRF1-209ENST00000547052 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
BRF1-209ENST00000547052 PRIM1P49642 420 aaKnown RBP23.61■■□□□ 1.37
BRF1-209ENST00000547052 CABP4P57796 275 aa23.61■■□□□ 1.37
BRF1-209ENST00000547052 ADAMTS8Q9UP79 889 aa23.61■■□□□ 1.37
BRF1-209ENST00000547052 MPRIPQ6WCQ1 1025 aa23.6■■□□□ 1.37
BRF1-209ENST00000547052 PHACTR3Q96KR7 559 aa23.59■■□□□ 1.37
BRF1-209ENST00000547052 HTATSF1O43719 755 aaKnown RBP23.58■■□□□ 1.37
BRF1-209ENST00000547052 TEFQ10587 303 aa23.58■■□□□ 1.37
BRF1-209ENST00000547052 NFE2L2Q16236 605 aa23.58■■□□□ 1.37
BRF1-209ENST00000547052 SMARCC1Q92922 1105 aaPredicted RBP23.58■■□□□ 1.37
BRF1-209ENST00000547052 ADAMTS7Q9UKP4 1686 aa23.57■■□□□ 1.36
BRF1-209ENST00000547052 CCDC146Q8IYE0 955 aa23.57■■□□□ 1.36
BRF1-209ENST00000547052 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
BRF1-209ENST00000547052 LY75O60449 1722 aa23.56■■□□□ 1.36
BRF1-209ENST00000547052 KCNQ2O43526 872 aa23.56■■□□□ 1.36
BRF1-209ENST00000547052 KDM6AO15550 1401 aaPredicted RBP23.56■■□□□ 1.36
BRF1-209ENST00000547052 PLSCR1O15162 318 aa23.55■■□□□ 1.36
BRF1-209ENST00000547052 RNMTO43148 476 aaKnown RBP23.55■■□□□ 1.36
BRF1-209ENST00000547052 FAM9BQ8IZU0 186 aa23.55■■□□□ 1.36
BRF1-209ENST00000547052 PNISRQ8TF01 805 aaKnown RBP23.55■■□□□ 1.36
BRF1-209ENST00000547052 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
BRF1-209ENST00000547052 RREB1Q92766 1687 aa23.54■■□□□ 1.36
BRF1-209ENST00000547052 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
BRF1-209ENST00000547052 RIPK4P57078 832 aa23.53■■□□□ 1.36
BRF1-209ENST00000547052 MRC1P22897 1456 aa23.53■■□□□ 1.36
BRF1-209ENST00000547052 EN1Q05925 392 aaPredicted RBP23.52■■□□□ 1.36
BRF1-209ENST00000547052 SLC52A2Q9HAB3 445 aa23.52■■□□□ 1.36
BRF1-209ENST00000547052 DEFB132Q7Z7B7 95 aa23.51■■□□□ 1.35
BRF1-209ENST00000547052 TMPOP42166 694 aaKnown RBP23.5■■□□□ 1.35
BRF1-209ENST00000547052 NEUROD2Q15784 382 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms