RNA–Protein interactions for RNA: ENST00000547008.5

LETMD1-206, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-206ENST00000547008 ZBED9Q6R2W3 1325 aa19.76■□□□□ 0.75
LETMD1-206ENST00000547008 TMPOP42166 694 aaKnown RBP19.76■□□□□ 0.75
LETMD1-206ENST00000547008 AMOTQ4VCS5 1084 aa19.76■□□□□ 0.75
LETMD1-206ENST00000547008 GAS2L2Q8NHY3 880 aa19.76■□□□□ 0.75
LETMD1-206ENST00000547008 ATRNO75882 1429 aa19.76■□□□□ 0.75
LETMD1-206ENST00000547008 IL2RBP14784 551 aa19.75■□□□□ 0.75
LETMD1-206ENST00000547008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.75■□□□□ 0.75
LETMD1-206ENST00000547008 PLEKHO1Q53GL0 409 aaPredicted RBP19.75■□□□□ 0.75
LETMD1-206ENST00000547008 USP35Q9P2H5 1018 aa19.75■□□□□ 0.75
LETMD1-206ENST00000547008 SHANK3Q9BYB0 1731 aa19.74■□□□□ 0.75
LETMD1-206ENST00000547008 CCDC9Q9Y3X0 531 aaKnown RBP19.74■□□□□ 0.75
LETMD1-206ENST00000547008 CCDC27Q2M243 656 aa19.73■□□□□ 0.75
LETMD1-206ENST00000547008 MTHFSDQ2M296 383 aaKnown RBP19.73■□□□□ 0.75
LETMD1-206ENST00000547008 CDCA7Q9BWT1 371 aaPredicted RBP19.73■□□□□ 0.75
LETMD1-206ENST00000547008 RRP7AQ9Y3A4 280 aaKnown RBP19.73■□□□□ 0.75
LETMD1-206ENST00000547008 GLI3P10071 1580 aa19.72■□□□□ 0.75
LETMD1-206ENST00000547008 BARGINQ6ZT62 677 aa19.72■□□□□ 0.75
LETMD1-206ENST00000547008 TRPC5Q9UL62 973 aaPredicted RBP19.72■□□□□ 0.75
LETMD1-206ENST00000547008 SPG7Q9UQ90 795 aa19.72■□□□□ 0.75
LETMD1-206ENST00000547008 LRRC37A3O60309 1634 aa19.72■□□□□ 0.75
LETMD1-206ENST00000547008 RIPK4P57078 832 aa19.71■□□□□ 0.75
LETMD1-206ENST00000547008 LMOD3Q0VAK6 560 aa19.71■□□□□ 0.75
LETMD1-206ENST00000547008 NEUROD2Q15784 382 aa19.71■□□□□ 0.75
LETMD1-206ENST00000547008 PHF23Q9BUL5 403 aaPredicted RBP19.71■□□□□ 0.75
LETMD1-206ENST00000547008 VIRMAQ69YN4 1812 aaKnown RBP19.71■□□□□ 0.75
LETMD1-206ENST00000547008 SENP3-EIF4A1A0A087X0R7 540 aa19.71■□□□□ 0.75
LETMD1-206ENST00000547008 THSD7AQ9UPZ6 1657 aa19.7■□□□□ 0.74
LETMD1-206ENST00000547008 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
LETMD1-206ENST00000547008 ZNF772Q68DY9 489 aaPredicted RBP19.69■□□□□ 0.74
LETMD1-206ENST00000547008 ZNF530Q6P9A1 599 aaPredicted RBP19.69■□□□□ 0.74
LETMD1-206ENST00000547008 SALL2Q9Y467 1007 aaPredicted RBP19.69■□□□□ 0.74
LETMD1-206ENST00000547008 TNS2Q63HR2 1409 aa19.69■□□□□ 0.74
LETMD1-206ENST00000547008 ZNF521Q96K83 1311 aa19.69■□□□□ 0.74
LETMD1-206ENST00000547008 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
LETMD1-206ENST00000547008 GNAT3A8MTJ3 354 aa19.68■□□□□ 0.74
LETMD1-206ENST00000547008 HTATSF1O43719 755 aaKnown RBP19.68■□□□□ 0.74
LETMD1-206ENST00000547008 WWC1Q8IX03 1113 aa19.68■□□□□ 0.74
LETMD1-206ENST00000547008 ZCRB1Q8TBF4 217 aaKnown RBP19.68■□□□□ 0.74
LETMD1-206ENST00000547008 GJD4Q96KN9 370 aaPredicted RBP19.68■□□□□ 0.74
LETMD1-206ENST00000547008 TRIM35Q9UPQ4 493 aa19.68■□□□□ 0.74
LETMD1-206ENST00000547008 PCDH11XQ9BZA7 1347 aa19.67■□□□□ 0.74
LETMD1-206ENST00000547008 PCDH11YQ9BZA8 1340 aa19.67■□□□□ 0.74
LETMD1-206ENST00000547008 AKAP4Q5JQC9 854 aa19.67■□□□□ 0.74
LETMD1-206ENST00000547008 C1orf141Q5JVX7 400 aa19.67■□□□□ 0.74
LETMD1-206ENST00000547008 SCN11AQ9UI33 1791 aa19.67■□□□□ 0.74
LETMD1-206ENST00000547008 ILDR1Q86SU0 546 aaPredicted RBP19.65■□□□□ 0.74
LETMD1-206ENST00000547008 QTRT2Q9H974 415 aaKnown RBP19.65■□□□□ 0.74
LETMD1-206ENST00000547008 IFNL2Q8IZJ0 200 aa19.65■□□□□ 0.74
LETMD1-206ENST00000547008 RTF1Q92541 710 aaKnown RBP19.65■□□□□ 0.74
LETMD1-206ENST00000547008 PHKG2P15735 406 aa19.64■□□□□ 0.73
LETMD1-206ENST00000547008 PDE3BQ13370 1112 aa19.64■□□□□ 0.73
LETMD1-206ENST00000547008 FAM98CQ17RN3 349 aaKnown RBP19.64■□□□□ 0.73
LETMD1-206ENST00000547008 WDR63Q8IWG1 891 aa19.64■□□□□ 0.73
LETMD1-206ENST00000547008 CYP27B1O15528 508 aa19.63■□□□□ 0.73
LETMD1-206ENST00000547008 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
LETMD1-206ENST00000547008 EXOC5O00471 708 aa19.62■□□□□ 0.73
LETMD1-206ENST00000547008 HSP90AB1P08238 724 aaKnown RBP19.62■□□□□ 0.73
LETMD1-206ENST00000547008 GOLGA2Q08379 1002 aa19.62■□□□□ 0.73
LETMD1-206ENST00000547008 DDB1Q16531 1140 aa19.62■□□□□ 0.73
LETMD1-206ENST00000547008 IL16Q14005 1332 aa19.62■□□□□ 0.73
LETMD1-206ENST00000547008 CEMIPQ8WUJ3 1361 aa19.61■□□□□ 0.73
LETMD1-206ENST00000547008 SIPA1L3O60292 1781 aaPredicted RBP19.6■□□□□ 0.73
LETMD1-206ENST00000547008 ONECUT3O60422 494 aaPredicted RBP19.6■□□□□ 0.73
LETMD1-206ENST00000547008 KDM6AO15550 1401 aaPredicted RBP19.59■□□□□ 0.73
LETMD1-206ENST00000547008 DCTN1Q14203 1278 aa19.59■□□□□ 0.73
LETMD1-206ENST00000547008 NKX1-1Q15270 411 aaPredicted RBP19.59■□□□□ 0.73
LETMD1-206ENST00000547008 MCM10Q7L590 875 aa19.59■□□□□ 0.73
LETMD1-206ENST00000547008 MRC1P22897 1456 aa19.59■□□□□ 0.73
LETMD1-206ENST00000547008 RBM6P78332 1123 aaKnown RBP19.59■□□□□ 0.73
LETMD1-206ENST00000547008 DCAF5Q96JK2 942 aa19.59■□□□□ 0.73
LETMD1-206ENST00000547008 TOGARAM1Q9Y4F4 1720 aa19.58■□□□□ 0.72
LETMD1-206ENST00000547008 RNMTO43148 476 aaKnown RBP19.58■□□□□ 0.72
LETMD1-206ENST00000547008 MPRIPQ6WCQ1 1025 aa19.58■□□□□ 0.72
LETMD1-206ENST00000547008 IL17REQ8NFR9 667 aa19.58■□□□□ 0.72
LETMD1-206ENST00000547008 DDX54Q8TDD1 881 aaKnown RBP19.58■□□□□ 0.72
LETMD1-206ENST00000547008 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.72
LETMD1-206ENST00000547008 A0A0G2JS52 829 aa19.57■□□□□ 0.72
LETMD1-206ENST00000547008 E9PSI1 815 aa19.57■□□□□ 0.72
LETMD1-206ENST00000547008 MYT1Q01538 1121 aa19.57■□□□□ 0.72
LETMD1-206ENST00000547008 DOT1LQ8TEK3 1739 aa19.56■□□□□ 0.72
LETMD1-206ENST00000547008 SLFN5Q08AF3 891 aa19.56■□□□□ 0.72
LETMD1-206ENST00000547008 LGR6Q9HBX8 967 aa19.56■□□□□ 0.72
LETMD1-206ENST00000547008 IFT57Q9NWB7 429 aa19.56■□□□□ 0.72
LETMD1-206ENST00000547008 RGS17Q9UGC6 210 aaPredicted RBP19.56■□□□□ 0.72
LETMD1-206ENST00000547008 BRWD3Q6RI45 1802 aa19.55■□□□□ 0.72
LETMD1-206ENST00000547008 GNAI1P63096 354 aa19.55■□□□□ 0.72
LETMD1-206ENST00000547008 CDCA7LQ96GN5 454 aa19.55■□□□□ 0.72
LETMD1-206ENST00000547008 MYH16Q9H6N6 1097 aa19.55■□□□□ 0.72
LETMD1-206ENST00000547008 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
LETMD1-206ENST00000547008 TEFQ10587 303 aa19.54■□□□□ 0.72
LETMD1-206ENST00000547008 ITGB4P16144 1822 aa19.54■□□□□ 0.72
LETMD1-206ENST00000547008 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
LETMD1-206ENST00000547008 CFAP44Q96MT7 982 aa19.53■□□□□ 0.72
LETMD1-206ENST00000547008 ZNF853P0CG23 659 aa19.52■□□□□ 0.72
LETMD1-206ENST00000547008 RXRBP28702 533 aa19.52■□□□□ 0.72
LETMD1-206ENST00000547008 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
LETMD1-206ENST00000547008 MARCH10Q8NA82 808 aaPredicted RBP19.52■□□□□ 0.72
LETMD1-206ENST00000547008 SPINK5Q9NQ38 1064 aaPredicted RBP19.52■□□□□ 0.72
LETMD1-206ENST00000547008 BABAM1Q9NWV8 329 aa19.52■□□□□ 0.72
LETMD1-206ENST00000547008 ERVV-2B6SEH9 535 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms