RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 SLC27A3Q5K4L6 730 aa16.05■□□□□ 0.16
RAB5C-203ENST00000546881 USHBP1Q8N6Y0 703 aa16.05■□□□□ 0.16
RAB5C-203ENST00000546881 MEGF6O75095 1541 aa16.04■□□□□ 0.16
RAB5C-203ENST00000546881 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
RAB5C-203ENST00000546881 TFCP2L1Q9NZI6 479 aa16.04■□□□□ 0.16
RAB5C-203ENST00000546881 SMG6Q86US8 1419 aaKnown RBP16.03■□□□□ 0.16
RAB5C-203ENST00000546881 RTL1A6NKG5 1358 aa16.03■□□□□ 0.16
RAB5C-203ENST00000546881 FYB1O15117 783 aa16.03■□□□□ 0.16
RAB5C-203ENST00000546881 NBPF6Q5VWK0 638 aa16.02■□□□□ 0.16
RAB5C-203ENST00000546881 RAPGEF4Q8WZA2 1011 aa16.02■□□□□ 0.16
RAB5C-203ENST00000546881 NBPF4Q96M43 638 aa16.02■□□□□ 0.16
RAB5C-203ENST00000546881 PNPLA7Q6ZV29 1317 aa16.01■□□□□ 0.15
RAB5C-203ENST00000546881 POLD1P28340 1107 aa16.01■□□□□ 0.15
RAB5C-203ENST00000546881 CCNL1Q9UK58 526 aaPredicted RBP16.01■□□□□ 0.15
RAB5C-203ENST00000546881 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
RAB5C-203ENST00000546881 MSH5O43196 834 aa16■□□□□ 0.15
RAB5C-203ENST00000546881 TATP17735 454 aaPredicted RBP16■□□□□ 0.15
RAB5C-203ENST00000546881 NSD2O96028 1365 aa16■□□□□ 0.15
RAB5C-203ENST00000546881 KIF20BQ96Q89 1820 aa15.99■□□□□ 0.15
RAB5C-203ENST00000546881 GPR162Q16538 588 aa15.99■□□□□ 0.15
RAB5C-203ENST00000546881 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
RAB5C-203ENST00000546881 HSP90AB2PQ58FF8 381 aa15.99■□□□□ 0.15
RAB5C-203ENST00000546881 PELP1Q8IZL8 1130 aaKnown RBP15.99■□□□□ 0.15
RAB5C-203ENST00000546881 SLC16A10Q8TF71 515 aa15.99■□□□□ 0.15
RAB5C-203ENST00000546881 ZNF784Q8NCA9 323 aaPredicted RBP15.98■□□□□ 0.15
RAB5C-203ENST00000546881 TUBGCP6Q96RT7 1819 aa15.98■□□□□ 0.15
RAB5C-203ENST00000546881 CGNL1Q0VF96 1302 aa15.97■□□□□ 0.15
RAB5C-203ENST00000546881 LY75O60449 1722 aa15.97■□□□□ 0.15
RAB5C-203ENST00000546881 QSER1Q2KHR3 1735 aa15.97■□□□□ 0.15
RAB5C-203ENST00000546881 FLT4P35916 1363 aa15.97■□□□□ 0.15
RAB5C-203ENST00000546881 MAP3K5Q99683 1374 aa15.97■□□□□ 0.15
RAB5C-203ENST00000546881 PPM1GO15355 546 aaPredicted RBP15.96■□□□□ 0.15
RAB5C-203ENST00000546881 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
RAB5C-203ENST00000546881 INSRP06213 1382 aa15.96■□□□□ 0.15
RAB5C-203ENST00000546881 PCDH11XQ9BZA7 1347 aa15.95■□□□□ 0.14
RAB5C-203ENST00000546881 PCDH11YQ9BZA8 1340 aa15.95■□□□□ 0.14
RAB5C-203ENST00000546881 NSD3Q9BZ95 1437 aa15.95■□□□□ 0.14
RAB5C-203ENST00000546881 EMILIN1Q9Y6C2 1016 aa15.95■□□□□ 0.14
RAB5C-203ENST00000546881 MPRIPQ6WCQ1 1025 aa15.94■□□□□ 0.14
RAB5C-203ENST00000546881 MSL1Q68DK7 614 aa15.93■□□□□ 0.14
RAB5C-203ENST00000546881 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
RAB5C-203ENST00000546881 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
RAB5C-203ENST00000546881 CHD4Q14839 1912 aa15.92■□□□□ 0.14
RAB5C-203ENST00000546881 COL23A1Q86Y22 540 aaPredicted RBP15.92■□□□□ 0.14
RAB5C-203ENST00000546881 NLGN2Q8NFZ4 835 aa15.92■□□□□ 0.14
RAB5C-203ENST00000546881 KIF24Q5T7B8 1368 aa15.91■□□□□ 0.14
RAB5C-203ENST00000546881 PALLDQ8WX93 1383 aa15.91■□□□□ 0.14
RAB5C-203ENST00000546881 C5P01031 1676 aa15.91■□□□□ 0.14
RAB5C-203ENST00000546881 CYP27B1O15528 508 aa15.9■□□□□ 0.14
RAB5C-203ENST00000546881 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
RAB5C-203ENST00000546881 UTRNP46939 3433 aa15.9■□□□□ 0.14
RAB5C-203ENST00000546881 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
RAB5C-203ENST00000546881 SMARCC1Q92922 1105 aaPredicted RBP15.87■□□□□ 0.13
RAB5C-203ENST00000546881 AK7Q96M32 723 aa15.87■□□□□ 0.13
RAB5C-203ENST00000546881 SPG7Q9UQ90 795 aa15.87■□□□□ 0.13
RAB5C-203ENST00000546881 PKD1L3Q7Z443 1732 aa15.86■□□□□ 0.13
RAB5C-203ENST00000546881 PHF14O94880 888 aa15.86■□□□□ 0.13
RAB5C-203ENST00000546881 TNNT2P45379 298 aaPredicted RBP15.86■□□□□ 0.13
RAB5C-203ENST00000546881 FLAD1Q8NFF5 587 aa15.86■□□□□ 0.13
RAB5C-203ENST00000546881 ITGB4P16144 1822 aa15.86■□□□□ 0.13
RAB5C-203ENST00000546881 HMGB2P26583 209 aaKnown RBP15.85■□□□□ 0.13
RAB5C-203ENST00000546881 PIGBQ92521 554 aa15.85■□□□□ 0.13
RAB5C-203ENST00000546881 EYA1Q99502 592 aa15.85■□□□□ 0.13
RAB5C-203ENST00000546881 TAF1LQ8IZX4 1826 aa15.84■□□□□ 0.13
RAB5C-203ENST00000546881 SENP3-EIF4A1A0A087X0R7 540 aa15.84■□□□□ 0.13
RAB5C-203ENST00000546881 YBX3P16989 372 aaKnown RBP eCLIP15.84■□□□□ 0.134e-8■■■■□ 23.1
RAB5C-203ENST00000546881 C4BP0C0L5 1744 aa15.84■□□□□ 0.13
RAB5C-203ENST00000546881 WASHC2AQ641Q2 1341 aa15.84■□□□□ 0.13
RAB5C-203ENST00000546881 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.13
RAB5C-203ENST00000546881 MAP2P11137 1827 aaKnown RBP15.83■□□□□ 0.12
RAB5C-203ENST00000546881 GRIN3BO60391 1043 aa15.83■□□□□ 0.12
RAB5C-203ENST00000546881 C1QTNF8P60827 252 aa15.83■□□□□ 0.12
RAB5C-203ENST00000546881 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
RAB5C-203ENST00000546881 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
RAB5C-203ENST00000546881 POLKQ9UBT6 870 aa15.83■□□□□ 0.12
RAB5C-203ENST00000546881 TIMELESSQ9UNS1 1208 aa15.83■□□□□ 0.12
RAB5C-203ENST00000546881 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
RAB5C-203ENST00000546881 NCAPD2Q15021 1401 aa15.82■□□□□ 0.12
RAB5C-203ENST00000546881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.81■□□□□ 0.12
RAB5C-203ENST00000546881 GIGYF1O75420 1035 aaPredicted RBP15.81■□□□□ 0.12
RAB5C-203ENST00000546881 AMIGO3Q86WK7 504 aa15.81■□□□□ 0.12
RAB5C-203ENST00000546881 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
RAB5C-203ENST00000546881 PHKG2P15735 406 aa15.8■□□□□ 0.12
RAB5C-203ENST00000546881 SIK1P57059 783 aa15.8■□□□□ 0.12
RAB5C-203ENST00000546881 EIF4A2Q14240 407 aaKnown RBP15.8■□□□□ 0.12
RAB5C-203ENST00000546881 IFNL2Q8IZJ0 200 aa15.8■□□□□ 0.12
RAB5C-203ENST00000546881 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
RAB5C-203ENST00000546881 WWC3Q9ULE0 1092 aa15.8■□□□□ 0.12
RAB5C-203ENST00000546881 ASAP1Q9ULH1 1129 aa15.8■□□□□ 0.12
RAB5C-203ENST00000546881 CD2APQ9Y5K6 639 aa15.8■□□□□ 0.12
RAB5C-203ENST00000546881 ATP6V1AP38606 617 aa15.79■□□□□ 0.12
RAB5C-203ENST00000546881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.79■□□□□ 0.12
RAB5C-203ENST00000546881 GNPATO15228 680 aa15.78■□□□□ 0.12
RAB5C-203ENST00000546881 UBR3Q6ZT12 1888 aa15.78■□□□□ 0.12
RAB5C-203ENST00000546881 SSFA2P28290 1259 aa15.77■□□□□ 0.12
RAB5C-203ENST00000546881 EIF4G2P78344 907 aaKnown RBP eCLIP15.77■□□□□ 0.12
RAB5C-203ENST00000546881 ITPK1Q13572 414 aa15.77■□□□□ 0.12
RAB5C-203ENST00000546881 CLSPNQ9HAW4 1339 aa15.76■□□□□ 0.11
RAB5C-203ENST00000546881 HSPA5P11021 654 aaKnown RBP15.76■□□□□ 0.11
RAB5C-203ENST00000546881 PANK3Q9H999 370 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms