RNA–Protein interactions for RNA: ENST00000546840.2

AC002996.1-201, humanhuman

APPRIS P1 TSL 5 BASIC

Gene AC002996.1, Length 784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002996.1-201ENST00000546840 SENP3-EIF4A1A0A087X0R7 540 aa17.53■□□□□ 0.4
AC002996.1-201ENST00000546840 C1QTNF8P60827 252 aa17.53■□□□□ 0.4
AC002996.1-201ENST00000546840 GPR162Q16538 588 aa17.53■□□□□ 0.4
AC002996.1-201ENST00000546840 DDX54Q8TDD1 881 aaKnown RBP17.52■□□□□ 0.4
AC002996.1-201ENST00000546840 KLHL34Q8N239 644 aa17.51■□□□□ 0.39
AC002996.1-201ENST00000546840 SYTL4Q96C24 671 aaPredicted RBP17.5■□□□□ 0.39
AC002996.1-201ENST00000546840 LTV1Q96GA3 475 aaPredicted RBP17.5■□□□□ 0.39
AC002996.1-201ENST00000546840 TFCP2L1Q9NZI6 479 aa17.5■□□□□ 0.39
AC002996.1-201ENST00000546840 MAP3K19Q56UN5 1328 aa17.49■□□□□ 0.39
AC002996.1-201ENST00000546840 ITGB4P16144 1822 aa17.49■□□□□ 0.39
AC002996.1-201ENST00000546840 HOXC9P31274 260 aa17.49■□□□□ 0.39
AC002996.1-201ENST00000546840 COG3Q96JB2 828 aa17.49■□□□□ 0.39
AC002996.1-201ENST00000546840 SMG6Q86US8 1419 aaKnown RBP17.48■□□□□ 0.39
AC002996.1-201ENST00000546840 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
AC002996.1-201ENST00000546840 TOGARAM1Q9Y4F4 1720 aa17.48■□□□□ 0.39
AC002996.1-201ENST00000546840 GIGYF1O75420 1035 aaPredicted RBP17.48■□□□□ 0.39
AC002996.1-201ENST00000546840 TONSLQ96HA7 1378 aa17.48■□□□□ 0.39
AC002996.1-201ENST00000546840 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
AC002996.1-201ENST00000546840 USP47Q96K76 1375 aa17.47■□□□□ 0.39
AC002996.1-201ENST00000546840 CGNL1Q0VF96 1302 aa17.47■□□□□ 0.39
AC002996.1-201ENST00000546840 AMPHP49418 695 aa17.46■□□□□ 0.39
AC002996.1-201ENST00000546840 PELP1Q8IZL8 1130 aaKnown RBP17.46■□□□□ 0.39
AC002996.1-201ENST00000546840 ZCRB1Q8TBF4 217 aaKnown RBP17.46■□□□□ 0.39
AC002996.1-201ENST00000546840 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
AC002996.1-201ENST00000546840 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.38
AC002996.1-201ENST00000546840 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
AC002996.1-201ENST00000546840 NLGN2Q8NFZ4 835 aa17.45■□□□□ 0.38
AC002996.1-201ENST00000546840 ANKRD26Q9UPS8 1709 aa17.44■□□□□ 0.38
AC002996.1-201ENST00000546840 SLC24A1O60721 1099 aa17.44■□□□□ 0.38
AC002996.1-201ENST00000546840 KCNQ4P56696 695 aa17.44■□□□□ 0.38
AC002996.1-201ENST00000546840 TESK2Q96S53 571 aa17.43■□□□□ 0.38
AC002996.1-201ENST00000546840 GRIN3BO60391 1043 aa17.42■□□□□ 0.38
AC002996.1-201ENST00000546840 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
AC002996.1-201ENST00000546840 PCDH11XQ9BZA7 1347 aa17.41■□□□□ 0.38
AC002996.1-201ENST00000546840 PCDH11YQ9BZA8 1340 aa17.41■□□□□ 0.38
AC002996.1-201ENST00000546840 KIF24Q5T7B8 1368 aa17.4■□□□□ 0.38
AC002996.1-201ENST00000546840 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
AC002996.1-201ENST00000546840 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
AC002996.1-201ENST00000546840 MAP2P11137 1827 aaKnown RBP17.4■□□□□ 0.38
AC002996.1-201ENST00000546840 MSH5O43196 834 aa17.39■□□□□ 0.37
AC002996.1-201ENST00000546840 YBX3P16989 372 aaKnown RBP eCLIP17.39■□□□□ 0.379e-7■□□□□ 9
AC002996.1-201ENST00000546840 FLT4P35916 1363 aa17.39■□□□□ 0.37
AC002996.1-201ENST00000546840 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
AC002996.1-201ENST00000546840 NSD3Q9BZ95 1437 aa17.38■□□□□ 0.37
AC002996.1-201ENST00000546840 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
AC002996.1-201ENST00000546840 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
AC002996.1-201ENST00000546840 NBPF6Q5VWK0 638 aa17.38■□□□□ 0.37
AC002996.1-201ENST00000546840 NBPF4Q96M43 638 aa17.38■□□□□ 0.37
AC002996.1-201ENST00000546840 INSRP06213 1382 aa17.38■□□□□ 0.37
AC002996.1-201ENST00000546840 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
AC002996.1-201ENST00000546840 TATP17735 454 aaPredicted RBP17.37■□□□□ 0.37
AC002996.1-201ENST00000546840 FBLN1P23142 703 aa17.37■□□□□ 0.37
AC002996.1-201ENST00000546840 FLAD1Q8NFF5 587 aa17.37■□□□□ 0.37
AC002996.1-201ENST00000546840 MSL1Q68DK7 614 aa17.36■□□□□ 0.37
AC002996.1-201ENST00000546840 USHBP1Q8N6Y0 703 aa17.36■□□□□ 0.37
AC002996.1-201ENST00000546840 CD2APQ9Y5K6 639 aa17.36■□□□□ 0.37
AC002996.1-201ENST00000546840 ADCY9O60503 1353 aa17.36■□□□□ 0.37
AC002996.1-201ENST00000546840 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
AC002996.1-201ENST00000546840 CICQ96RK0 1608 aaPredicted RBP17.35■□□□□ 0.37
AC002996.1-201ENST00000546840 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
AC002996.1-201ENST00000546840 FYB1O15117 783 aa17.34■□□□□ 0.37
AC002996.1-201ENST00000546840 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
AC002996.1-201ENST00000546840 CEP350Q5VT06 3117 aa17.34■□□□□ 0.37
AC002996.1-201ENST00000546840 TMF1P82094 1093 aa17.32■□□□□ 0.36
AC002996.1-201ENST00000546840 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
AC002996.1-201ENST00000546840 AK7Q96M32 723 aa17.31■□□□□ 0.36
AC002996.1-201ENST00000546840 ZNF831Q5JPB2 1677 aa17.31■□□□□ 0.36
AC002996.1-201ENST00000546840 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
AC002996.1-201ENST00000546840 HSP90AB2PQ58FF8 381 aa17.3■□□□□ 0.36
AC002996.1-201ENST00000546840 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
AC002996.1-201ENST00000546840 CYP27B1O15528 508 aa17.29■□□□□ 0.36
AC002996.1-201ENST00000546840 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
AC002996.1-201ENST00000546840 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
AC002996.1-201ENST00000546840 IGSF1Q8N6C5 1336 aa17.27■□□□□ 0.36
AC002996.1-201ENST00000546840 BRCA1P38398 1863 aaKnown RBP17.27■□□□□ 0.36
AC002996.1-201ENST00000546840 SSFA2P28290 1259 aa17.27■□□□□ 0.36
AC002996.1-201ENST00000546840 CDCA8Q53HL2 280 aa17.27■□□□□ 0.36
AC002996.1-201ENST00000546840 IFFO2Q5TF58 517 aa17.27■□□□□ 0.36
AC002996.1-201ENST00000546840 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
AC002996.1-201ENST00000546840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
AC002996.1-201ENST00000546840 PHF14O94880 888 aa17.25■□□□□ 0.35
AC002996.1-201ENST00000546840 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
AC002996.1-201ENST00000546840 PLEKHG2Q9H7P9 1386 aa17.25■□□□□ 0.35
AC002996.1-201ENST00000546840 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
AC002996.1-201ENST00000546840 AMIGO3Q86WK7 504 aa17.24■□□□□ 0.35
AC002996.1-201ENST00000546840 SPG7Q9UQ90 795 aa17.24■□□□□ 0.35
AC002996.1-201ENST00000546840 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
AC002996.1-201ENST00000546840 SIK1P57059 783 aa17.23■□□□□ 0.35
AC002996.1-201ENST00000546840 PIGBQ92521 554 aa17.23■□□□□ 0.35
AC002996.1-201ENST00000546840 EMILIN1Q9Y6C2 1016 aa17.23■□□□□ 0.35
AC002996.1-201ENST00000546840 ARFGEF1Q9Y6D6 1849 aa17.22■□□□□ 0.35
AC002996.1-201ENST00000546840 HSPA6P17066 643 aa17.22■□□□□ 0.35
AC002996.1-201ENST00000546840 PXDNLA1KZ92 1463 aa17.21■□□□□ 0.35
AC002996.1-201ENST00000546840 LINC00116Q8NCU8 138 aa17.21■□□□□ 0.35
AC002996.1-201ENST00000546840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.21■□□□□ 0.35
AC002996.1-201ENST00000546840 TMOD3Q9NYL9 352 aa17.21■□□□□ 0.35
AC002996.1-201ENST00000546840 KDRP35968 1356 aa17.2■□□□□ 0.34
AC002996.1-201ENST00000546840 ZNF526Q8TF50 670 aaPredicted RBP17.2■□□□□ 0.34
AC002996.1-201ENST00000546840 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
AC002996.1-201ENST00000546840 GNPATO15228 680 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms