RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 CCDC125Q86Z20 511 aa10.17□□□□□ -0.78
LINC02404-201ENST00000546710 IRF7Q92985 503 aa10.17□□□□□ -0.78
LINC02404-201ENST00000546710 ERBB4Q15303 1308 aa10.16□□□□□ -0.78
LINC02404-201ENST00000546710 CEP126Q9P2H0 1117 aa10.16□□□□□ -0.78
LINC02404-201ENST00000546710 PCDHB11Q9Y5F2 797 aa10.16□□□□□ -0.78
LINC02404-201ENST00000546710 RIMBP3CA6NJZ7 1639 aa10.15□□□□□ -0.78
LINC02404-201ENST00000546710 RIMBP3BA6NNM3 1639 aa10.15□□□□□ -0.78
LINC02404-201ENST00000546710 RIMBP3Q9UFD9 1639 aa10.15□□□□□ -0.78
LINC02404-201ENST00000546710 SCTRP47872 440 aa10.15□□□□□ -0.78
LINC02404-201ENST00000546710 ERVK-9P63128 1117 aa10.15□□□□□ -0.78
LINC02404-201ENST00000546710 VAC14Q08AM6 782 aa10.15□□□□□ -0.78
LINC02404-201ENST00000546710 TRIM52Q96A61 297 aa10.15□□□□□ -0.78
LINC02404-201ENST00000546710 PPFIA3O75145 1194 aa10.14□□□□□ -0.79
LINC02404-201ENST00000546710 GMPRP36959 345 aa10.14□□□□□ -0.79
LINC02404-201ENST00000546710 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC02404-201ENST00000546710 PTSQ03393 145 aa10.14□□□□□ -0.79
LINC02404-201ENST00000546710 CC2D2BQ6DHV5 1058 aa10.14□□□□□ -0.79
LINC02404-201ENST00000546710 ZSCAN1Q8NBB4 408 aa10.14□□□□□ -0.79
LINC02404-201ENST00000546710 RNF217Q8TC41 542 aa10.14□□□□□ -0.79
LINC02404-201ENST00000546710 ATP5J2-PTCD1G3V325 749 aa10.13□□□□□ -0.79
LINC02404-201ENST00000546710 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
LINC02404-201ENST00000546710 CCDC85AQ96PX6 553 aaPredicted RBP10.12□□□□□ -0.79
LINC02404-201ENST00000546710 COG6Q9Y2V7 657 aa10.11□□□□□ -0.79
LINC02404-201ENST00000546710 CDCA7Q9BWT1 371 aaPredicted RBP10.1□□□□□ -0.79
LINC02404-201ENST00000546710 OSBPL3Q9H4L5 887 aa10.1□□□□□ -0.79
LINC02404-201ENST00000546710 A0A1W2PRU2 124 aa10.09□□□□□ -0.79
LINC02404-201ENST00000546710 VSIG8P0DPA2 414 aa10.09□□□□□ -0.79
LINC02404-201ENST00000546710 WASHC4Q2M389 1173 aa10.09□□□□□ -0.79
LINC02404-201ENST00000546710 CCDC155Q8N6L0 562 aa10.09□□□□□ -0.79
LINC02404-201ENST00000546710 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
LINC02404-201ENST00000546710 MEN1O00255 615 aa10.08□□□□□ -0.8
LINC02404-201ENST00000546710 TRAK2O60296 914 aa10.08□□□□□ -0.8
LINC02404-201ENST00000546710 TSGA10IPQ3SY00 556 aa10.08□□□□□ -0.8
LINC02404-201ENST00000546710 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
LINC02404-201ENST00000546710 PHTF2Q8N3S3 785 aa10.08□□□□□ -0.8
LINC02404-201ENST00000546710 POM121Q96HA1 1249 aa10.08□□□□□ -0.8
LINC02404-201ENST00000546710 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
LINC02404-201ENST00000546710 SLC35F4A4IF30 521 aa10.07□□□□□ -0.8
LINC02404-201ENST00000546710 RNF144AP50876 292 aaPredicted RBP10.07□□□□□ -0.8
LINC02404-201ENST00000546710 TMEM132AQ24JP5 1023 aa10.07□□□□□ -0.8
LINC02404-201ENST00000546710 SLFNL1Q499Z3 407 aa10.07□□□□□ -0.8
LINC02404-201ENST00000546710 LYSMD3Q7Z3D4 306 aa10.07□□□□□ -0.8
LINC02404-201ENST00000546710 ILDR2Q71H61 639 aa10.06□□□□□ -0.8
LINC02404-201ENST00000546710 PRICKLE2Q7Z3G6 844 aa10.06□□□□□ -0.8
LINC02404-201ENST00000546710 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
LINC02404-201ENST00000546710 DISP3Q9P2K9 1392 aa10.05□□□□□ -0.8
LINC02404-201ENST00000546710 SENP3-EIF4A1A0A087X0R7 540 aa10.05□□□□□ -0.8
LINC02404-201ENST00000546710 ARHGEF10LQ9HCE6 1279 aa10.05□□□□□ -0.8
LINC02404-201ENST00000546710 DOLKQ9UPQ8 538 aa10.05□□□□□ -0.8
LINC02404-201ENST00000546710 MYCP01106 439 aaPredicted RBP10.04□□□□□ -0.8
LINC02404-201ENST00000546710 LORP23490 312 aaPredicted RBP10.04□□□□□ -0.8
LINC02404-201ENST00000546710 FLIIQ13045 1269 aa10.04□□□□□ -0.8
LINC02404-201ENST00000546710 SEMA3FQ13275 785 aa10.04□□□□□ -0.8
LINC02404-201ENST00000546710 CLN3Q13286 438 aa10.04□□□□□ -0.8
LINC02404-201ENST00000546710 NLRP3Q96P20 1036 aa10.04□□□□□ -0.8
LINC02404-201ENST00000546710 RAB6BQ9NRW1 208 aa10.04□□□□□ -0.8
LINC02404-201ENST00000546710 ARHGEF11O15085 1522 aa10.03□□□□□ -0.8
LINC02404-201ENST00000546710 RHOQP17081 205 aa10.03□□□□□ -0.8
LINC02404-201ENST00000546710 GPC1P35052 558 aa10.03□□□□□ -0.8
LINC02404-201ENST00000546710 ITGA6P23229 1130 aa10.02□□□□□ -0.81
LINC02404-201ENST00000546710 GPR161Q8N6U8 529 aaKnown RBP10.02□□□□□ -0.81
LINC02404-201ENST00000546710 RAD21O60216 631 aa10.01□□□□□ -0.81
LINC02404-201ENST00000546710 GNRH1P01148 92 aa10.01□□□□□ -0.81
LINC02404-201ENST00000546710 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
LINC02404-201ENST00000546710 SOX11P35716 441 aa10.01□□□□□ -0.81
LINC02404-201ENST00000546710 OXLD1Q5BKU9 147 aa10.01□□□□□ -0.81
LINC02404-201ENST00000546710 SLC27A3Q5K4L6 730 aa10.01□□□□□ -0.81
LINC02404-201ENST00000546710 CHIC2Q9UKJ5 165 aa10.01□□□□□ -0.81
LINC02404-201ENST00000546710 LOC100996750A0A140TA64 210 aa10□□□□□ -0.81
LINC02404-201ENST00000546710 IL2RAP01589 272 aa10□□□□□ -0.81
LINC02404-201ENST00000546710 USP4Q13107 963 aa10□□□□□ -0.81
LINC02404-201ENST00000546710 KRTAP4-6Q9BYQ5 205 aa10□□□□□ -0.81
LINC02404-201ENST00000546710 MYO15BQ96JP2 1530 aa10□□□□□ -0.81
LINC02404-201ENST00000546710 POU4F2Q12837 409 aa9.99□□□□□ -0.81
LINC02404-201ENST00000546710 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
LINC02404-201ENST00000546710 VWA5B2Q8N398 1253 aa9.99□□□□□ -0.81
LINC02404-201ENST00000546710 NANOS1Q8WY41 292 aaKnown RBP9.99□□□□□ -0.81
LINC02404-201ENST00000546710 CNKSR1Q969H4 720 aa9.99□□□□□ -0.81
LINC02404-201ENST00000546710 GRIP2Q9C0E4 1043 aa9.99□□□□□ -0.81
LINC02404-201ENST00000546710 THOC2Q8NI27 1593 aaKnown RBP9.99□□□□□ -0.81
LINC02404-201ENST00000546710 CDC14CA4D256 554 aa9.98□□□□□ -0.81
LINC02404-201ENST00000546710 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
LINC02404-201ENST00000546710 STAU1O95793 577 aaKnown RBP9.98□□□□□ -0.81
LINC02404-201ENST00000546710 PLPP7Q8NBV4 271 aa9.98□□□□□ -0.81
LINC02404-201ENST00000546710 ESYT1Q9BSJ8 1104 aa9.98□□□□□ -0.81
LINC02404-201ENST00000546710 ALG2Q9H553 416 aa9.97□□□□□ -0.81
LINC02404-201ENST00000546710 CUEDC1Q9NWM3 386 aaPredicted RBP9.97□□□□□ -0.81
LINC02404-201ENST00000546710 ERCC6L2Q5T890 1561 aa9.97□□□□□ -0.81
LINC02404-201ENST00000546710 KRT76Q01546 638 aa9.96□□□□□ -0.82
LINC02404-201ENST00000546710 CENPCQ03188 943 aa9.96□□□□□ -0.82
LINC02404-201ENST00000546710 MAP7D1Q3KQU3 841 aa9.96□□□□□ -0.82
LINC02404-201ENST00000546710 XAGE2Q96GT9 111 aa9.96□□□□□ -0.82
LINC02404-201ENST00000546710 POM121CA8CG34 1229 aa9.95□□□□□ -0.82
LINC02404-201ENST00000546710 NBPF10Q6P3W6 841 aaKnown RBP9.95□□□□□ -0.82
LINC02404-201ENST00000546710 SV2AQ7L0J3 742 aa9.95□□□□□ -0.82
LINC02404-201ENST00000546710 NBPF15Q8N660 670 aa9.95□□□□□ -0.82
LINC02404-201ENST00000546710 SIRT1Q96EB6 747 aa9.95□□□□□ -0.82
LINC02404-201ENST00000546710 COL25A1Q9BXS0 654 aaPredicted RBP9.95□□□□□ -0.82
LINC02404-201ENST00000546710 HRH3Q9Y5N1 445 aa9.95□□□□□ -0.82
LINC02404-201ENST00000546710 SPATA31C2B4DYI2 1134 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms