RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 PDGFDQ9GZP0 370 aaPredicted RBP26.03■■□□□ 1.76
CHPT1-202ENST00000546490 TUBGCP6Q96RT7 1819 aa26.02■■□□□ 1.76
CHPT1-202ENST00000546490 ZBTB7AO95365 584 aa26.02■■□□□ 1.76
CHPT1-202ENST00000546490 ZCRB1Q8TBF4 217 aaKnown RBP26.02■■□□□ 1.76
CHPT1-202ENST00000546490 CGNL1Q0VF96 1302 aa26.02■■□□□ 1.76
CHPT1-202ENST00000546490 PKD1L3Q7Z443 1732 aa26.01■■□□□ 1.75
CHPT1-202ENST00000546490 NBPF6Q5VWK0 638 aa26■■□□□ 1.75
CHPT1-202ENST00000546490 NBPF4Q96M43 638 aa26■■□□□ 1.75
CHPT1-202ENST00000546490 CARD14Q9BXL6 1004 aa26■■□□□ 1.75
CHPT1-202ENST00000546490 RAPGEF4Q8WZA2 1011 aa25.99■■□□□ 1.75
CHPT1-202ENST00000546490 SYTL4Q96C24 671 aaPredicted RBP25.99■■□□□ 1.75
CHPT1-202ENST00000546490 HSP90AB2PQ58FF8 381 aa25.98■■□□□ 1.75
CHPT1-202ENST00000546490 USHBP1Q8N6Y0 703 aa25.98■■□□□ 1.75
CHPT1-202ENST00000546490 MTFR1LQ9H019 292 aa25.97■■□□□ 1.75
CHPT1-202ENST00000546490 NSD2O96028 1365 aa25.96■■□□□ 1.75
CHPT1-202ENST00000546490 SLC27A3Q5K4L6 730 aa25.96■■□□□ 1.75
CHPT1-202ENST00000546490 TATP17735 454 aaPredicted RBP25.95■■□□□ 1.74
CHPT1-202ENST00000546490 LRRC4BQ9NT99 713 aa25.95■■□□□ 1.74
CHPT1-202ENST00000546490 ATF5Q9Y2D1 282 aaPredicted RBP25.95■■□□□ 1.74
CHPT1-202ENST00000546490 DCAF8L1A6NGE4 600 aa25.94■■□□□ 1.74
CHPT1-202ENST00000546490 PTGER2P43116 358 aa25.94■■□□□ 1.74
CHPT1-202ENST00000546490 PRIM1P49642 420 aaKnown RBP25.94■■□□□ 1.74
CHPT1-202ENST00000546490 ZNF827Q17R98 1081 aa25.94■■□□□ 1.74
CHPT1-202ENST00000546490 TOGARAM1Q9Y4F4 1720 aa25.94■■□□□ 1.74
CHPT1-202ENST00000546490 ITGB4P16144 1822 aa25.93■■□□□ 1.74
CHPT1-202ENST00000546490 PCDH11XQ9BZA7 1347 aa25.93■■□□□ 1.74
CHPT1-202ENST00000546490 PCDH11YQ9BZA8 1340 aa25.93■■□□□ 1.74
CHPT1-202ENST00000546490 EMILIN1Q9Y6C2 1016 aa25.93■■□□□ 1.74
CHPT1-202ENST00000546490 C5P01031 1676 aa25.93■■□□□ 1.74
CHPT1-202ENST00000546490 COL24A1Q17RW2 1714 aa25.92■■□□□ 1.74
CHPT1-202ENST00000546490 POLR3GLQ9BT43 218 aa25.92■■□□□ 1.74
CHPT1-202ENST00000546490 NCAPD2Q15021 1401 aa25.91■■□□□ 1.74
CHPT1-202ENST00000546490 EIF4G2P78344 907 aaKnown RBP eCLIP25.9■■□□□ 1.74
CHPT1-202ENST00000546490 TAF1LQ8IZX4 1826 aa25.89■■□□□ 1.74
CHPT1-202ENST00000546490 CCER1Q8TC90 406 aaPredicted RBP25.89■■□□□ 1.74
CHPT1-202ENST00000546490 AKT1S1Q96B36 256 aa25.89■■□□□ 1.74
CHPT1-202ENST00000546490 PPM1GO15355 546 aaPredicted RBP25.88■■□□□ 1.73
CHPT1-202ENST00000546490 SGIP1Q9BQI5 828 aa25.87■■□□□ 1.73
CHPT1-202ENST00000546490 HSPA5P11021 654 aaKnown RBP25.85■■□□□ 1.73
CHPT1-202ENST00000546490 WASHC2AQ641Q2 1341 aa25.85■■□□□ 1.73
CHPT1-202ENST00000546490 FHDC1Q9C0D6 1143 aaPredicted RBP25.84■■□□□ 1.73
CHPT1-202ENST00000546490 CCNL1Q9UK58 526 aaPredicted RBP25.84■■□□□ 1.73
CHPT1-202ENST00000546490 SLC16A10Q8TF71 515 aa25.83■■□□□ 1.73
CHPT1-202ENST00000546490 PNPLA7Q6ZV29 1317 aa25.83■■□□□ 1.73
CHPT1-202ENST00000546490 YY1P25490 414 aa25.82■■□□□ 1.72
CHPT1-202ENST00000546490 KCNQ4P56696 695 aa25.82■■□□□ 1.72
CHPT1-202ENST00000546490 TFCP2L1Q9NZI6 479 aa25.82■■□□□ 1.72
CHPT1-202ENST00000546490 ARXQ96QS3 562 aa25.81■■□□□ 1.72
CHPT1-202ENST00000546490 MAP3K5Q99683 1374 aa25.81■■□□□ 1.72
CHPT1-202ENST00000546490 CYP27B1O15528 508 aa25.8■■□□□ 1.72
CHPT1-202ENST00000546490 SYT17Q9BSW7 474 aa25.8■■□□□ 1.72
CHPT1-202ENST00000546490 CHD4Q14839 1912 aa25.8■■□□□ 1.72
CHPT1-202ENST00000546490 POLKQ9UBT6 870 aa25.79■■□□□ 1.72
CHPT1-202ENST00000546490 PALLDQ8WX93 1383 aa25.79■■□□□ 1.72
CHPT1-202ENST00000546490 SPG7Q9UQ90 795 aa25.78■■□□□ 1.72
CHPT1-202ENST00000546490 C4BP0C0L5 1744 aa25.77■■□□□ 1.72
CHPT1-202ENST00000546490 EYA1Q99502 592 aa25.77■■□□□ 1.72
CHPT1-202ENST00000546490 UTRNP46939 3433 aa25.76■■□□□ 1.71
CHPT1-202ENST00000546490 HMGB2P26583 209 aaKnown RBP25.76■■□□□ 1.71
CHPT1-202ENST00000546490 POLD1P28340 1107 aa25.76■■□□□ 1.71
CHPT1-202ENST00000546490 TNNT2P45379 298 aaPredicted RBP25.76■■□□□ 1.71
CHPT1-202ENST00000546490 MPRIPQ6WCQ1 1025 aa25.76■■□□□ 1.71
CHPT1-202ENST00000546490 PLEKHG2Q9H7P9 1386 aa25.76■■□□□ 1.71
CHPT1-202ENST00000546490 PANK3Q9H999 370 aa25.75■■□□□ 1.71
CHPT1-202ENST00000546490 UBR3Q6ZT12 1888 aa25.74■■□□□ 1.71
CHPT1-202ENST00000546490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.73■■□□□ 1.713e-9■□□□□ 9
CHPT1-202ENST00000546490 EIF4A2Q14240 407 aaKnown RBP25.72■■□□□ 1.71
CHPT1-202ENST00000546490 NKX1-1Q15270 411 aaPredicted RBP25.72■■□□□ 1.71
CHPT1-202ENST00000546490 SMARCC1Q92922 1105 aaPredicted RBP25.72■■□□□ 1.71
CHPT1-202ENST00000546490 MSH5O43196 834 aa25.69■■□□□ 1.7
CHPT1-202ENST00000546490 KLHL34Q8N239 644 aa25.69■■□□□ 1.7
CHPT1-202ENST00000546490 IGSF1Q8N6C5 1336 aa25.68■■□□□ 1.7
CHPT1-202ENST00000546490 IFNL2Q8IZJ0 200 aa25.68■■□□□ 1.7
CHPT1-202ENST00000546490 PIGBQ92521 554 aa25.67■■□□□ 1.7
CHPT1-202ENST00000546490 PHKG2P15735 406 aa25.66■■□□□ 1.7
CHPT1-202ENST00000546490 COL23A1Q86Y22 540 aaPredicted RBP25.66■■□□□ 1.7
CHPT1-202ENST00000546490 TMOD3Q9NYL9 352 aa25.66■■□□□ 1.7
CHPT1-202ENST00000546490 MORC1Q86VD1 984 aa25.65■■□□□ 1.7
CHPT1-202ENST00000546490 FLAD1Q8NFF5 587 aa25.65■■□□□ 1.7
CHPT1-202ENST00000546490 GOLGB1Q14789 3259 aaKnown RBP25.64■■□□□ 1.7
CHPT1-202ENST00000546490 KNSTRNQ9Y448 316 aa25.64■■□□□ 1.7
CHPT1-202ENST00000546490 ZNF831Q5JPB2 1677 aa25.64■■□□□ 1.69
CHPT1-202ENST00000546490 AK7Q96M32 723 aa25.63■■□□□ 1.69
CHPT1-202ENST00000546490 MSL1Q68DK7 614 aa25.6■■□□□ 1.69
CHPT1-202ENST00000546490 COL5A3P25940 1745 aaPredicted RBP25.6■■□□□ 1.69
CHPT1-202ENST00000546490 LOC102724428A0A0B4J2F2 783 aa25.59■■□□□ 1.69
CHPT1-202ENST00000546490 SIK1P57059 783 aa25.59■■□□□ 1.69
CHPT1-202ENST00000546490 GPR162Q16538 588 aa25.59■■□□□ 1.69
CHPT1-202ENST00000546490 KIF7Q2M1P5 1343 aa25.59■■□□□ 1.69
CHPT1-202ENST00000546490 VIRMAQ69YN4 1812 aaKnown RBP25.58■■□□□ 1.68
CHPT1-202ENST00000546490 HSP90AB1P08238 724 aaKnown RBP25.57■■□□□ 1.68
CHPT1-202ENST00000546490 PLEKHO1Q53GL0 409 aaPredicted RBP25.57■■□□□ 1.68
CHPT1-202ENST00000546490 SCN11AQ9UI33 1791 aa25.56■■□□□ 1.68
CHPT1-202ENST00000546490 AMOTQ4VCS5 1084 aa25.56■■□□□ 1.68
CHPT1-202ENST00000546490 NLGN2Q8NFZ4 835 aa25.56■■□□□ 1.68
CHPT1-202ENST00000546490 ASAP1Q9ULH1 1129 aa25.56■■□□□ 1.68
CHPT1-202ENST00000546490 PHF14O94880 888 aa25.55■■□□□ 1.68
CHPT1-202ENST00000546490 LINC00116Q8NCU8 138 aa25.55■■□□□ 1.68
CHPT1-202ENST00000546490 KDRP35968 1356 aa25.55■■□□□ 1.68
CHPT1-202ENST00000546490 KDM6AO15550 1401 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms