RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
PRKDC-211ENST00000546304 SWT1Q5T5J6 900 aaKnown RBP9.11□□□□□ -0.95
PRKDC-211ENST00000546304 PXYLP1Q8TE99 480 aa9.11□□□□□ -0.95
PRKDC-211ENST00000546304 CPS1P31327 1500 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 RALGAPBQ86X10 1494 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 SLF2Q8IX21 1173 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 DCAF11Q8TEB1 546 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 L3MBTL2Q969R5 705 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 TMEM134Q9H6X4 195 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 ARHGEF28Q8N1W1 1705 aaKnown RBP9.1□□□□□ -0.95
PRKDC-211ENST00000546304 PIK3R4Q99570 1358 aa9.1□□□□□ -0.95
PRKDC-211ENST00000546304 LTBP4Q8N2S1 1624 aa9.09□□□□□ -0.95
PRKDC-211ENST00000546304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.09□□□□□ -0.95
PRKDC-211ENST00000546304 RCCD1A6NED2 376 aa9.09□□□□□ -0.95
PRKDC-211ENST00000546304 METTL3Q86U44 580 aaKnown RBP9.09□□□□□ -0.95
PRKDC-211ENST00000546304 BCANQ96GW7 911 aa9.09□□□□□ -0.95
PRKDC-211ENST00000546304 SLC26A8Q96RN1 970 aa9.09□□□□□ -0.95
PRKDC-211ENST00000546304 XIRP1Q702N8 1843 aaKnown RBP9.09□□□□□ -0.95
PRKDC-211ENST00000546304 METP08581 1390 aa9.09□□□□□ -0.95
PRKDC-211ENST00000546304 PTCH1Q13635 1447 aa9.08□□□□□ -0.96
PRKDC-211ENST00000546304 ITGBL1O95965 494 aaPredicted RBP9.08□□□□□ -0.96
PRKDC-211ENST00000546304 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
PRKDC-211ENST00000546304 TECPR2O15040 1411 aa9.07□□□□□ -0.96
PRKDC-211ENST00000546304 PTPRUQ92729 1446 aa9.07□□□□□ -0.96
PRKDC-211ENST00000546304 NALCNQ8IZF0 1738 aa9.07□□□□□ -0.96
PRKDC-211ENST00000546304 ZNF335Q9H4Z2 1342 aaPredicted RBP9.06□□□□□ -0.96
PRKDC-211ENST00000546304 DLC1Q96QB1 1528 aa9.06□□□□□ -0.96
PRKDC-211ENST00000546304 LMOD2Q6P5Q4 547 aa9.06□□□□□ -0.96
PRKDC-211ENST00000546304 TBX22Q9Y458 520 aa9.06□□□□□ -0.96
PRKDC-211ENST00000546304 YTHDC2Q9H6S0 1430 aaKnown RBP9.05□□□□□ -0.96
PRKDC-211ENST00000546304 QRICH2Q9H0J4 1663 aa9.05□□□□□ -0.96
PRKDC-211ENST00000546304 RNF40O75150 1001 aa9.05□□□□□ -0.96
PRKDC-211ENST00000546304 TIMELESSQ9UNS1 1208 aa9.05□□□□□ -0.96
PRKDC-211ENST00000546304 LRRC7Q96NW7 1537 aa9.05□□□□□ -0.96
PRKDC-211ENST00000546304 ROCK2O75116 1388 aaKnown RBP9.04□□□□□ -0.96
PRKDC-211ENST00000546304 LRPPRCP42704 1394 aaKnown RBP9.04□□□□□ -0.96
PRKDC-211ENST00000546304 GPRASP1Q5JY77 1395 aa9.04□□□□□ -0.96
PRKDC-211ENST00000546304 MAP2K5Q13163 448 aa9.04□□□□□ -0.96
PRKDC-211ENST00000546304 CFAP70Q5T0N1 1121 aa9.04□□□□□ -0.96
PRKDC-211ENST00000546304 C14orf93Q9H972 538 aaKnown RBP9.04□□□□□ -0.96
PRKDC-211ENST00000546304 ADGRB2O60241 1585 aa9.03□□□□□ -0.96
PRKDC-211ENST00000546304 CDC42BPGQ6DT37 1551 aa9.03□□□□□ -0.96
PRKDC-211ENST00000546304 IQSEC2Q5JU85 1478 aa9.02□□□□□ -0.96
PRKDC-211ENST00000546304 ROBO2Q9HCK4 1378 aa9.02□□□□□ -0.97
PRKDC-211ENST00000546304 KCNA6P17658 529 aa9.02□□□□□ -0.97
PRKDC-211ENST00000546304 APLP1P51693 650 aa9.02□□□□□ -0.97
PRKDC-211ENST00000546304 NBPF8Q3BBV2 869 aa9.02□□□□□ -0.97
PRKDC-211ENST00000546304 FAM135BQ49AJ0 1406 aa9.02□□□□□ -0.97
PRKDC-211ENST00000546304 MINK1Q8N4C8 1332 aaPredicted RBP9.02□□□□□ -0.97
PRKDC-211ENST00000546304 ABCC11Q96J66 1382 aa9.01□□□□□ -0.97
PRKDC-211ENST00000546304 IRF6O14896 467 aa9.01□□□□□ -0.97
PRKDC-211ENST00000546304 TMEM132EQ6IEE7 984 aa9.01□□□□□ -0.97
PRKDC-211ENST00000546304 PRR14Q9BWN1 585 aa9.01□□□□□ -0.97
PRKDC-211ENST00000546304 ADGRL3Q9HAR2 1447 aa9.01□□□□□ -0.97
PRKDC-211ENST00000546304 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.01□□□□□ -0.97
PRKDC-211ENST00000546304 TMEM94Q12767 1356 aa9□□□□□ -0.97
PRKDC-211ENST00000546304 EIF3AQ14152 1382 aaKnown RBP9□□□□□ -0.97
PRKDC-211ENST00000546304 TJAP1Q5JTD0 557 aa9□□□□□ -0.97
PRKDC-211ENST00000546304 PHOX2BQ99453 314 aa9□□□□□ -0.97
PRKDC-211ENST00000546304 AMOTL2Q9Y2J4 779 aa9□□□□□ -0.97
PRKDC-211ENST00000546304 FMN2Q9NZ56 1722 aa9□□□□□ -0.97
PRKDC-211ENST00000546304 DCCP43146 1447 aa8.99□□□□□ -0.97
PRKDC-211ENST00000546304 KCNC4Q03721 635 aa8.99□□□□□ -0.97
PRKDC-211ENST00000546304 NBPF1Q3BBV0 1214 aa8.99□□□□□ -0.97
PRKDC-211ENST00000546304 DAXXQ9UER7 740 aaPredicted RBP8.99□□□□□ -0.97
PRKDC-211ENST00000546304 PLEKHH1Q9ULM0 1364 aa8.99□□□□□ -0.97
PRKDC-211ENST00000546304 NCOA3Q9Y6Q9 1424 aa8.98□□□□□ -0.97
PRKDC-211ENST00000546304 STK26Q9P289 416 aa8.98□□□□□ -0.97
PRKDC-211ENST00000546304 USP47Q96K76 1375 aa8.98□□□□□ -0.97
PRKDC-211ENST00000546304 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
PRKDC-211ENST00000546304 ZMYND10O75800 440 aa8.97□□□□□ -0.97
PRKDC-211ENST00000546304 SLC10A3P09131 477 aa8.97□□□□□ -0.97
PRKDC-211ENST00000546304 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
PRKDC-211ENST00000546304 CARD11Q9BXL7 1154 aa8.97□□□□□ -0.97
PRKDC-211ENST00000546304 IL21Q9HBE4 155 aa8.97□□□□□ -0.97
PRKDC-211ENST00000546304 TRAK1Q9UPV9 953 aa8.97□□□□□ -0.97
PRKDC-211ENST00000546304 TOPAZ1Q8N9V7 1692 aa8.97□□□□□ -0.97
PRKDC-211ENST00000546304 MSH6P52701 1360 aa8.97□□□□□ -0.97
PRKDC-211ENST00000546304 TULP4Q9NRJ4 1543 aa8.96□□□□□ -0.97
PRKDC-211ENST00000546304 A0A0G2JS52 829 aa8.96□□□□□ -0.98
PRKDC-211ENST00000546304 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
PRKDC-211ENST00000546304 PROSER2Q86WR7 435 aaPredicted RBP8.96□□□□□ -0.98
PRKDC-211ENST00000546304 PRAM1Q96QH2 718 aa8.96□□□□□ -0.98
PRKDC-211ENST00000546304 MTRQ99707 1265 aa8.96□□□□□ -0.98
PRKDC-211ENST00000546304 SBNO2Q9Y2G9 1366 aa8.96□□□□□ -0.98
PRKDC-211ENST00000546304 USP32Q8NFA0 1604 aa8.95□□□□□ -0.98
PRKDC-211ENST00000546304 CFHP08603 1231 aa8.95□□□□□ -0.98
PRKDC-211ENST00000546304 KMT5BQ4FZB7 885 aa8.95□□□□□ -0.98
PRKDC-211ENST00000546304 C14orf37Q86TY3 774 aa8.95□□□□□ -0.98
PRKDC-211ENST00000546304 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
PRKDC-211ENST00000546304 CENPJQ9HC77 1338 aaPredicted RBP8.95□□□□□ -0.98
PRKDC-211ENST00000546304 RGPD8O14715 1765 aaPredicted RBP8.94□□□□□ -0.98
PRKDC-211ENST00000546304 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
PRKDC-211ENST00000546304 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
PRKDC-211ENST00000546304 SIRT1Q96EB6 747 aa8.94□□□□□ -0.98
PRKDC-211ENST00000546304 KIF1AQ12756 1690 aa8.94□□□□□ -0.98
PRKDC-211ENST00000546304 ROBO1Q9Y6N7 1651 aa8.94□□□□□ -0.98
PRKDC-211ENST00000546304 SAFB2Q14151 953 aaKnown RBP eCLIP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms