RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 TRIM34Q9BYJ4 488 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 SLC52A1Q9NWF4 448 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 ITPRIPQ8IWB1 547 aa9.68□□□□□ -0.86
UBR1-202ENST00000546274 MPNDQ8N594 471 aa9.68□□□□□ -0.86
UBR1-202ENST00000546274 TNPO1Q92973 898 aaKnown RBP9.68□□□□□ -0.86
UBR1-202ENST00000546274 PPIP5K1Q6PFW1 1433 aa9.68□□□□□ -0.86
UBR1-202ENST00000546274 APPP05067 770 aa9.68□□□□□ -0.86
UBR1-202ENST00000546274 DNAJC2Q99543 621 aaKnown RBP9.68□□□□□ -0.86
UBR1-202ENST00000546274 ZKSCAN5Q9Y2L8 839 aa9.68□□□□□ -0.86
UBR1-202ENST00000546274 U2AF2P26368 475 aaKnown RBP eCLIP9.67□□□□□ -0.862e-6■■■■□ 20.8
UBR1-202ENST00000546274 SAMD1Q6SPF0 538 aaPredicted RBP9.67□□□□□ -0.86
UBR1-202ENST00000546274 GBP4Q96PP9 640 aa9.67□□□□□ -0.86
UBR1-202ENST00000546274 C22orf23Q9BZE7 217 aa9.67□□□□□ -0.86
UBR1-202ENST00000546274 TERF2IPQ9NYB0 399 aa9.67□□□□□ -0.86
UBR1-202ENST00000546274 SPATA31D1Q6ZQQ2 1576 aa9.67□□□□□ -0.86
UBR1-202ENST00000546274 CNPY4Q8N129 248 aa9.67□□□□□ -0.86
UBR1-202ENST00000546274 KCNG1Q9UIX4 513 aa9.67□□□□□ -0.86
UBR1-202ENST00000546274 DDX49Q9Y6V7 483 aaKnown RBP9.67□□□□□ -0.86
UBR1-202ENST00000546274 DLC1Q96QB1 1528 aa9.67□□□□□ -0.86
UBR1-202ENST00000546274 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
UBR1-202ENST00000546274 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
UBR1-202ENST00000546274 RNF216Q9NWF9 866 aaPredicted RBP9.66□□□□□ -0.86
UBR1-202ENST00000546274 NRXN3Q9Y4C0 1643 aa9.66□□□□□ -0.86
UBR1-202ENST00000546274 PTMAP06454 111 aaKnown RBP9.66□□□□□ -0.86
UBR1-202ENST00000546274 HSCBQ8IWL3 235 aa9.66□□□□□ -0.86
UBR1-202ENST00000546274 PDCL2Q8N4E4 241 aa9.66□□□□□ -0.86
UBR1-202ENST00000546274 MYRIPQ8NFW9 859 aa9.66□□□□□ -0.86
UBR1-202ENST00000546274 HDAC5Q9UQL6 1122 aa9.66□□□□□ -0.86
UBR1-202ENST00000546274 KNDC1Q76NI1 1749 aa9.66□□□□□ -0.86
UBR1-202ENST00000546274 ATP7BP35670 1465 aa9.66□□□□□ -0.86
UBR1-202ENST00000546274 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
UBR1-202ENST00000546274 MFAP1P55081 439 aaKnown RBP9.66□□□□□ -0.86
UBR1-202ENST00000546274 SKOR2Q2VWA4 1001 aaPredicted RBP9.66□□□□□ -0.86
UBR1-202ENST00000546274 MON2Q7Z3U7 1717 aa9.65□□□□□ -0.86
UBR1-202ENST00000546274 KIF16BQ96L93 1317 aa9.65□□□□□ -0.86
UBR1-202ENST00000546274 FBLN1P23142 703 aa9.65□□□□□ -0.86
UBR1-202ENST00000546274 NUCB1Q02818 461 aa9.65□□□□□ -0.86
UBR1-202ENST00000546274 ALDH1L2Q3SY69 923 aa9.65□□□□□ -0.86
UBR1-202ENST00000546274 CDK19Q9BWU1 502 aa9.65□□□□□ -0.86
UBR1-202ENST00000546274 A2ML1A8K2U0 1454 aa9.65□□□□□ -0.86
UBR1-202ENST00000546274 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
UBR1-202ENST00000546274 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
UBR1-202ENST00000546274 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
UBR1-202ENST00000546274 CEP170BQ9Y4F5 1589 aaPredicted RBP9.65□□□□□ -0.86
UBR1-202ENST00000546274 FCHSD2O94868 740 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 DDIT3P35638 169 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 TNRQ92752 1358 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 PTCH1Q13635 1447 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 FBXO31Q5XUX0 539 aaPredicted RBP9.64□□□□□ -0.87
UBR1-202ENST00000546274 POLKQ9UBT6 870 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 AKAP12Q02952 1782 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 ERICH4A6NGS2 130 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 HS1BP3Q53T59 392 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 PHACTR3Q96KR7 559 aa9.64□□□□□ -0.87
UBR1-202ENST00000546274 CEBPAP49715 358 aaPredicted RBP9.63□□□□□ -0.87
UBR1-202ENST00000546274 RBM25P49756 843 aaKnown RBP9.63□□□□□ -0.87
UBR1-202ENST00000546274 KIF3AQ9Y496 699 aa9.63□□□□□ -0.87
UBR1-202ENST00000546274 PRKAR2BP31323 418 aa9.63□□□□□ -0.87
UBR1-202ENST00000546274 HDGFL2Q7Z4V5 671 aaPredicted RBP9.63□□□□□ -0.87
UBR1-202ENST00000546274 TIGD1Q96MW7 591 aa9.62□□□□□ -0.87
UBR1-202ENST00000546274 RBSNQ9H1K0 784 aa9.62□□□□□ -0.87
UBR1-202ENST00000546274 CPSF1Q10570 1443 aaKnown RBP9.62□□□□□ -0.87
UBR1-202ENST00000546274 ZBTB7BO15156 539 aaPredicted RBP9.62□□□□□ -0.87
UBR1-202ENST00000546274 IPO8O15397 1037 aaKnown RBP9.62□□□□□ -0.87
UBR1-202ENST00000546274 CAVIN1Q6NZI2 390 aaKnown RBP9.62□□□□□ -0.87
UBR1-202ENST00000546274 CDK12Q9NYV4 1490 aaPredicted RBP9.62□□□□□ -0.87
UBR1-202ENST00000546274 VAMP4O75379 141 aa9.62□□□□□ -0.87
UBR1-202ENST00000546274 CHD1LQ86WJ1 897 aa9.62□□□□□ -0.87
UBR1-202ENST00000546274 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
UBR1-202ENST00000546274 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
UBR1-202ENST00000546274 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
UBR1-202ENST00000546274 TSPYL6Q8N831 410 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 KIF2CQ99661 725 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 THUMPD2Q9BTF0 503 aaKnown RBP9.61□□□□□ -0.87
UBR1-202ENST00000546274 LNPKQ9C0E8 428 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 ITSN1Q15811 1721 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 NRKQ7Z2Y5 1582 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 GOLGA6L22H0YM25 854 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 TNNT3P45378 269 aaPredicted RBP9.61□□□□□ -0.87
UBR1-202ENST00000546274 KIAA2012Q0VF49 1180 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.61□□□□□ -0.87
UBR1-202ENST00000546274 CCDC66A2RUB6 948 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 ZNF853P0CG23 659 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 CAPN2P17655 700 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 SIRT2Q8IXJ6 389 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 RNF214Q8ND24 703 aa9.61□□□□□ -0.87
UBR1-202ENST00000546274 CPS1P31327 1500 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 NFE2L2Q16236 605 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 WAPLQ7Z5K2 1190 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 C17orf53Q8N3J3 647 aaPredicted RBP9.6□□□□□ -0.87
UBR1-202ENST00000546274 ZNF428Q96B54 188 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 CCDC39Q9UFE4 941 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 ABCC4O15439 1325 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 PATL2C9JE40 543 aaKnown RBP9.6□□□□□ -0.87
UBR1-202ENST00000546274 HMOX1P09601 288 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 IL13P35225 146 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 BMP2KLQ5H9B9 411 aa9.6□□□□□ -0.87
UBR1-202ENST00000546274 ARHGAP45Q92619 1136 aa9.59□□□□□ -0.87
UBR1-202ENST00000546274 SNX21Q969T3 373 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms