RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 OVOS2A0A0G2JMS6 1433 aa24.68■■□□□ 1.54
CCDC189-212ENST00000546006 PLEKHG2Q9H7P9 1386 aa24.68■■□□□ 1.54
CCDC189-212ENST00000546006 PARP4Q9UKK3 1724 aaKnown RBP24.67■■□□□ 1.54
CCDC189-212ENST00000546006 A0A0G2JS52 829 aa24.66■■□□□ 1.54
CCDC189-212ENST00000546006 PRKAR2BP31323 418 aa24.66■■□□□ 1.54
CCDC189-212ENST00000546006 MYT1Q01538 1121 aa24.66■■□□□ 1.54
CCDC189-212ENST00000546006 SEPT12Q8IYM1 358 aa24.66■■□□□ 1.54
CCDC189-212ENST00000546006 PNNQ9H307 717 aaKnown RBP24.65■■□□□ 1.54
CCDC189-212ENST00000546006 EXOC5O00471 708 aa24.63■■□□□ 1.53
CCDC189-212ENST00000546006 DDB1Q16531 1140 aa24.63■■□□□ 1.53
CCDC189-212ENST00000546006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.63■■□□□ 1.53
CCDC189-212ENST00000546006 RGS12O14924 1447 aa24.63■■□□□ 1.53
CCDC189-212ENST00000546006 LRRC37A3O60309 1634 aa24.63■■□□□ 1.53
CCDC189-212ENST00000546006 ZCRB1Q8TBF4 217 aaKnown RBP24.62■■□□□ 1.53
CCDC189-212ENST00000546006 PLEKHF1Q96S99 279 aa24.62■■□□□ 1.53
CCDC189-212ENST00000546006 TNS2Q63HR2 1409 aa24.62■■□□□ 1.53
CCDC189-212ENST00000546006 AMOTQ4VCS5 1084 aa24.61■■□□□ 1.53
CCDC189-212ENST00000546006 PLEKHO1Q53GL0 409 aaPredicted RBP24.61■■□□□ 1.53
CCDC189-212ENST00000546006 FAM9BQ8IZU0 186 aa24.61■■□□□ 1.53
CCDC189-212ENST00000546006 SPG7Q9UQ90 795 aa24.61■■□□□ 1.53
CCDC189-212ENST00000546006 PKD1L3Q7Z443 1732 aa24.6■■□□□ 1.53
CCDC189-212ENST00000546006 PHACTR3Q96KR7 559 aa24.6■■□□□ 1.53
CCDC189-212ENST00000546006 NEFMP07197 916 aa24.58■■□□□ 1.53
CCDC189-212ENST00000546006 CCDC146Q8IYE0 955 aa24.58■■□□□ 1.53
CCDC189-212ENST00000546006 PDE3BQ13370 1112 aa24.57■■□□□ 1.52
CCDC189-212ENST00000546006 RUNDC1Q96C34 613 aa24.57■■□□□ 1.52
CCDC189-212ENST00000546006 PCDH11XQ9BZA7 1347 aa24.57■■□□□ 1.52
CCDC189-212ENST00000546006 PCDH11YQ9BZA8 1340 aa24.57■■□□□ 1.52
CCDC189-212ENST00000546006 MAPK8IP3Q9UPT6 1336 aa24.57■■□□□ 1.52
CCDC189-212ENST00000546006 MTHFSDQ2M296 383 aaKnown RBP24.56■■□□□ 1.52
CCDC189-212ENST00000546006 SHANK3Q9BYB0 1731 aa24.56■■□□□ 1.52
CCDC189-212ENST00000546006 GAS2L2Q8NHY3 880 aa24.56■■□□□ 1.52
CCDC189-212ENST00000546006 DDX54Q8TDD1 881 aaKnown RBP24.56■■□□□ 1.52
CCDC189-212ENST00000546006 ZNF530Q6P9A1 599 aaPredicted RBP24.55■■□□□ 1.52
CCDC189-212ENST00000546006 CYP27B1O15528 508 aa24.54■■□□□ 1.52
CCDC189-212ENST00000546006 KRT27Q7Z3Y8 459 aa24.54■■□□□ 1.52
CCDC189-212ENST00000546006 BRWD3Q6RI45 1802 aa24.54■■□□□ 1.52
CCDC189-212ENST00000546006 IFNL2Q8IZJ0 200 aa24.53■■□□□ 1.52
CCDC189-212ENST00000546006 MARCH10Q8NA82 808 aaPredicted RBP24.53■■□□□ 1.52
CCDC189-212ENST00000546006 SOCS7O14512 581 aa24.52■■□□□ 1.52
CCDC189-212ENST00000546006 PHKG2P15735 406 aa24.52■■□□□ 1.52
CCDC189-212ENST00000546006 C1orf141Q5JVX7 400 aa24.51■■□□□ 1.51
CCDC189-212ENST00000546006 AKAP4Q5JQC9 854 aa24.51■■□□□ 1.51
CCDC189-212ENST00000546006 NFE2L2Q16236 605 aa24.5■■□□□ 1.51
CCDC189-212ENST00000546006 NKX1-1Q15270 411 aaPredicted RBP24.48■■□□□ 1.51
CCDC189-212ENST00000546006 APAF1O14727 1248 aa24.47■■□□□ 1.51
CCDC189-212ENST00000546006 TMPOP42166 694 aaKnown RBP24.47■■□□□ 1.51
CCDC189-212ENST00000546006 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
CCDC189-212ENST00000546006 HSP90AB1P08238 724 aaKnown RBP24.46■■□□□ 1.51
CCDC189-212ENST00000546006 FAM182BQ5T319 152 aa24.46■■□□□ 1.51
CCDC189-212ENST00000546006 GNAT3A8MTJ3 354 aa24.45■■□□□ 1.51
CCDC189-212ENST00000546006 BCL9O00512 1426 aa24.45■■□□□ 1.5
CCDC189-212ENST00000546006 RRP7AQ9Y3A4 280 aaKnown RBP24.45■■□□□ 1.5
CCDC189-212ENST00000546006 RIPK4P57078 832 aa24.44■■□□□ 1.5
CCDC189-212ENST00000546006 DCAF5Q96JK2 942 aa24.44■■□□□ 1.5
CCDC189-212ENST00000546006 HTATSF1O43719 755 aaKnown RBP24.42■■□□□ 1.5
CCDC189-212ENST00000546006 NEUROD2Q15784 382 aa24.42■■□□□ 1.5
CCDC189-212ENST00000546006 MPRIPQ6WCQ1 1025 aa24.42■■□□□ 1.5
CCDC189-212ENST00000546006 FAM196AQ6ZSG2 479 aa24.42■■□□□ 1.5
CCDC189-212ENST00000546006 KDM6AO15550 1401 aaPredicted RBP24.42■■□□□ 1.5
CCDC189-212ENST00000546006 RTF1Q92541 710 aaKnown RBP24.41■■□□□ 1.5
CCDC189-212ENST00000546006 DLG5Q8TDM6 1919 aa24.4■■□□□ 1.5
CCDC189-212ENST00000546006 RNMTO43148 476 aaKnown RBP24.4■■□□□ 1.5
CCDC189-212ENST00000546006 LMOD3Q0VAK6 560 aa24.4■■□□□ 1.5
CCDC189-212ENST00000546006 LGR6Q9HBX8 967 aa24.4■■□□□ 1.5
CCDC189-212ENST00000546006 EP400Q96L91 3159 aa24.39■■□□□ 1.5
CCDC189-212ENST00000546006 SENP3-EIF4A1A0A087X0R7 540 aa24.39■■□□□ 1.49
CCDC189-212ENST00000546006 IL17REQ8NFR9 667 aa24.39■■□□□ 1.49
CCDC189-212ENST00000546006 ADAMTS7Q9UKP4 1686 aa24.39■■□□□ 1.49
CCDC189-212ENST00000546006 NCBP3Q53F19 620 aaKnown RBP24.38■■□□□ 1.49
CCDC189-212ENST00000546006 TOGARAM1Q9Y4F4 1720 aa24.37■■□□□ 1.49
CCDC189-212ENST00000546006 DCTN1Q14203 1278 aa24.37■■□□□ 1.49
CCDC189-212ENST00000546006 MCM10Q7L590 875 aa24.37■■□□□ 1.49
CCDC189-212ENST00000546006 ACSBG1Q96GR2 724 aa24.37■■□□□ 1.49
CCDC189-212ENST00000546006 TRIM35Q9UPQ4 493 aa24.37■■□□□ 1.49
CCDC189-212ENST00000546006 DOT1LQ8TEK3 1739 aa24.37■■□□□ 1.49
CCDC189-212ENST00000546006 SCN11AQ9UI33 1791 aa24.36■■□□□ 1.49
CCDC189-212ENST00000546006 ERVV-2B6SEH9 535 aa24.36■■□□□ 1.49
CCDC189-212ENST00000546006 CEMIPQ8WUJ3 1361 aa24.36■■□□□ 1.49
CCDC189-212ENST00000546006 PRIM1P49642 420 aaKnown RBP24.35■■□□□ 1.49
CCDC189-212ENST00000546006 CCDC27Q2M243 656 aa24.35■■□□□ 1.49
CCDC189-212ENST00000546006 NGEFQ8N5V2 710 aa24.35■■□□□ 1.49
CCDC189-212ENST00000546006 KCNQ2O43526 872 aa24.33■■□□□ 1.49
CCDC189-212ENST00000546006 SYTL4Q96C24 671 aaPredicted RBP24.33■■□□□ 1.49
CCDC189-212ENST00000546006 SALL2Q9Y467 1007 aaPredicted RBP24.33■■□□□ 1.49
CCDC189-212ENST00000546006 VIRMAQ69YN4 1812 aaKnown RBP24.33■■□□□ 1.49
CCDC189-212ENST00000546006 SBF2Q86WG5 1849 aa24.33■■□□□ 1.49
CCDC189-212ENST00000546006 MRC1P22897 1456 aa24.33■■□□□ 1.48
CCDC189-212ENST00000546006 CABP4P57796 275 aa24.32■■□□□ 1.48
CCDC189-212ENST00000546006 THUMPD2Q9BTF0 503 aaKnown RBP24.32■■□□□ 1.48
CCDC189-212ENST00000546006 SLC52A2Q9HAB3 445 aa24.32■■□□□ 1.48
CCDC189-212ENST00000546006 KAT6BQ8WYB5 2073 aa24.32■■□□□ 1.48
CCDC189-212ENST00000546006 NHSQ6T4R5 1651 aa24.32■■□□□ 1.48
CCDC189-212ENST00000546006 TEFQ10587 303 aa24.31■■□□□ 1.48
CCDC189-212ENST00000546006 TMOD3Q9NYL9 352 aa24.31■■□□□ 1.48
CCDC189-212ENST00000546006 TRIM37O94972 964 aa24.3■■□□□ 1.48
CCDC189-212ENST00000546006 NFATC2IPQ8NCF5 419 aa24.3■■□□□ 1.48
CCDC189-212ENST00000546006 BCL11BQ9C0K0 894 aaPredicted RBP24.3■■□□□ 1.48
CCDC189-212ENST00000546006 ITGB4P16144 1822 aa24.3■■□□□ 1.48
CCDC189-212ENST00000546006 WWC1Q8IX03 1113 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms