RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
CPSF7-225ENST00000545934 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
CPSF7-225ENST00000545934 C5P01031 1676 aa23.57■■□□□ 1.36
CPSF7-225ENST00000545934 RTL1A6NKG5 1358 aa23.56■■□□□ 1.36
CPSF7-225ENST00000545934 COG3Q96JB2 828 aa23.56■■□□□ 1.36
CPSF7-225ENST00000545934 ST20-MTHFSA0A0A6YYL1 179 aa23.55■■□□□ 1.36
CPSF7-225ENST00000545934 ITGB4P16144 1822 aa23.54■■□□□ 1.36
CPSF7-225ENST00000545934 FBLN1P23142 703 aa23.54■■□□□ 1.36
CPSF7-225ENST00000545934 PRIM1P49642 420 aaKnown RBP23.54■■□□□ 1.36
CPSF7-225ENST00000545934 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
CPSF7-225ENST00000545934 SLC24A1O60721 1099 aa23.52■■□□□ 1.36
CPSF7-225ENST00000545934 AMPHP49418 695 aa23.52■■□□□ 1.36
CPSF7-225ENST00000545934 KCNQ4P56696 695 aa23.52■■□□□ 1.36
CPSF7-225ENST00000545934 TOGARAM1Q9Y4F4 1720 aa23.51■■□□□ 1.35
CPSF7-225ENST00000545934 SYTL4Q96C24 671 aaPredicted RBP23.5■■□□□ 1.35
CPSF7-225ENST00000545934 PKD1L3Q7Z443 1732 aa23.5■■□□□ 1.35
CPSF7-225ENST00000545934 GOLGB1Q14789 3259 aaKnown RBP23.5■■□□□ 1.35
CPSF7-225ENST00000545934 POLD1P28340 1107 aa23.49■■□□□ 1.35
CPSF7-225ENST00000545934 TFCP2L1Q9NZI6 479 aa23.49■■□□□ 1.35
CPSF7-225ENST00000545934 CGNL1Q0VF96 1302 aa23.49■■□□□ 1.35
CPSF7-225ENST00000545934 ANKRD26Q9UPS8 1709 aa23.48■■□□□ 1.35
CPSF7-225ENST00000545934 NBPF6Q5VWK0 638 aa23.48■■□□□ 1.35
CPSF7-225ENST00000545934 NBPF4Q96M43 638 aa23.48■■□□□ 1.35
CPSF7-225ENST00000545934 FYB1O15117 783 aa23.47■■□□□ 1.35
CPSF7-225ENST00000545934 GPR162Q16538 588 aa23.47■■□□□ 1.35
CPSF7-225ENST00000545934 CCNL1Q9UK58 526 aaPredicted RBP23.46■■□□□ 1.35
CPSF7-225ENST00000545934 RRS1Q15050 365 aaKnown RBP23.45■■□□□ 1.34
CPSF7-225ENST00000545934 UBR3Q6ZT12 1888 aa23.45■■□□□ 1.34
CPSF7-225ENST00000545934 SMG6Q86US8 1419 aaKnown RBP23.44■■□□□ 1.34
CPSF7-225ENST00000545934 INSRP06213 1382 aa23.44■■□□□ 1.34
CPSF7-225ENST00000545934 USP47Q96K76 1375 aa23.44■■□□□ 1.34
CPSF7-225ENST00000545934 C1QTNF8P60827 252 aa23.44■■□□□ 1.34
CPSF7-225ENST00000545934 NLGN2Q8NFZ4 835 aa23.44■■□□□ 1.34
CPSF7-225ENST00000545934 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
CPSF7-225ENST00000545934 C4BP0C0L5 1744 aa23.42■■□□□ 1.34
CPSF7-225ENST00000545934 KIF24Q5T7B8 1368 aa23.42■■□□□ 1.34
CPSF7-225ENST00000545934 COL23A1Q86Y22 540 aaPredicted RBP23.42■■□□□ 1.34
CPSF7-225ENST00000545934 KLHL34Q8N239 644 aa23.42■■□□□ 1.34
CPSF7-225ENST00000545934 USHBP1Q8N6Y0 703 aa23.42■■□□□ 1.34
CPSF7-225ENST00000545934 GGNBP2Q9H3C7 697 aa23.42■■□□□ 1.34
CPSF7-225ENST00000545934 RAPGEF4Q8WZA2 1011 aa23.4■■□□□ 1.34
CPSF7-225ENST00000545934 NCAPD2Q15021 1401 aa23.4■■□□□ 1.34
CPSF7-225ENST00000545934 FLT4P35916 1363 aa23.4■■□□□ 1.34
CPSF7-225ENST00000545934 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
CPSF7-225ENST00000545934 PCDH11XQ9BZA7 1347 aa23.38■■□□□ 1.33
CPSF7-225ENST00000545934 PCDH11YQ9BZA8 1340 aa23.38■■□□□ 1.33
CPSF7-225ENST00000545934 TATP17735 454 aaPredicted RBP23.38■■□□□ 1.33
CPSF7-225ENST00000545934 TMF1P82094 1093 aa23.38■■□□□ 1.33
CPSF7-225ENST00000545934 SENP3-EIF4A1A0A087X0R7 540 aa23.36■■□□□ 1.33
CPSF7-225ENST00000545934 YBX3P16989 372 aaKnown RBP eCLIP23.36■■□□□ 1.333e-7■■□□□ 12.8
CPSF7-225ENST00000545934 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
CPSF7-225ENST00000545934 PALLDQ8WX93 1383 aa23.35■■□□□ 1.33
CPSF7-225ENST00000545934 CYP27B1O15528 508 aa23.34■■□□□ 1.33
CPSF7-225ENST00000545934 GRIN3BO60391 1043 aa23.33■■□□□ 1.33
CPSF7-225ENST00000545934 MSH5O43196 834 aa23.32■■□□□ 1.32
CPSF7-225ENST00000545934 GIGYF1O75420 1035 aaPredicted RBP23.31■■□□□ 1.32
CPSF7-225ENST00000545934 HMGB2P26583 209 aaKnown RBP23.31■■□□□ 1.32
CPSF7-225ENST00000545934 MSL1Q68DK7 614 aa23.31■■□□□ 1.32
CPSF7-225ENST00000545934 FLAD1Q8NFF5 587 aa23.31■■□□□ 1.32
CPSF7-225ENST00000545934 CARD14Q9BXL6 1004 aa23.31■■□□□ 1.32
CPSF7-225ENST00000545934 MPRIPQ6WCQ1 1025 aa23.3■■□□□ 1.32
CPSF7-225ENST00000545934 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
CPSF7-225ENST00000545934 NKX1-1Q15270 411 aaPredicted RBP23.29■■□□□ 1.32
CPSF7-225ENST00000545934 CDCA8Q53HL2 280 aa23.29■■□□□ 1.32
CPSF7-225ENST00000545934 NSD3Q9BZ95 1437 aa23.28■■□□□ 1.32
CPSF7-225ENST00000545934 EMILIN1Q9Y6C2 1016 aa23.28■■□□□ 1.32
CPSF7-225ENST00000545934 KIF13BQ9NQT8 1826 aa23.28■■□□□ 1.32
CPSF7-225ENST00000545934 AMIGO3Q86WK7 504 aa23.27■■□□□ 1.32
CPSF7-225ENST00000545934 SMARCC1Q92922 1105 aaPredicted RBP23.27■■□□□ 1.32
CPSF7-225ENST00000545934 ZNF831Q5JPB2 1677 aa23.27■■□□□ 1.32
CPSF7-225ENST00000545934 KIAA1551Q9HCM1 1747 aa23.25■■□□□ 1.31
CPSF7-225ENST00000545934 PIGBQ92521 554 aa23.25■■□□□ 1.31
CPSF7-225ENST00000545934 ADCY9O60503 1353 aa23.24■■□□□ 1.31
CPSF7-225ENST00000545934 ATP10DQ9P241 1426 aa23.24■■□□□ 1.31
CPSF7-225ENST00000545934 COL5A3P25940 1745 aaPredicted RBP23.23■■□□□ 1.31
CPSF7-225ENST00000545934 WASHC2AQ641Q2 1341 aa23.23■■□□□ 1.31
CPSF7-225ENST00000545934 AK7Q96M32 723 aa23.22■■□□□ 1.31
CPSF7-225ENST00000545934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.21■■□□□ 1.318e-10■■■□□ 17.4
CPSF7-225ENST00000545934 CICQ96RK0 1608 aaPredicted RBP23.21■■□□□ 1.31
CPSF7-225ENST00000545934 SPG7Q9UQ90 795 aa23.2■■□□□ 1.3
CPSF7-225ENST00000545934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.19■■□□□ 1.3
CPSF7-225ENST00000545934 SSFA2P28290 1259 aa23.19■■□□□ 1.3
CPSF7-225ENST00000545934 EYA1Q99502 592 aa23.19■■□□□ 1.3
CPSF7-225ENST00000545934 PLEKHG2Q9H7P9 1386 aa23.18■■□□□ 1.3
CPSF7-225ENST00000545934 LOC102724428A0A0B4J2F2 783 aa23.18■■□□□ 1.3
CPSF7-225ENST00000545934 SIK1P57059 783 aa23.18■■□□□ 1.3
CPSF7-225ENST00000545934 SMIM5Q71RC9 77 aa23.18■■□□□ 1.3
CPSF7-225ENST00000545934 LINC00116Q8NCU8 138 aa23.18■■□□□ 1.3
CPSF7-225ENST00000545934 BRCA1P38398 1863 aaKnown RBP23.17■■□□□ 1.3
CPSF7-225ENST00000545934 N4BP2Q86UW6 1770 aaPredicted RBP23.17■■□□□ 1.3
CPSF7-225ENST00000545934 CEP350Q5VT06 3117 aa23.17■■□□□ 1.3
CPSF7-225ENST00000545934 PHF14O94880 888 aa23.16■■□□□ 1.3
CPSF7-225ENST00000545934 PHKG2P15735 406 aa23.16■■□□□ 1.3
CPSF7-225ENST00000545934 POLKQ9UBT6 870 aa23.16■■□□□ 1.3
CPSF7-225ENST00000545934 IGSF1Q8N6C5 1336 aa23.15■■□□□ 1.3
CPSF7-225ENST00000545934 PPM1GO15355 546 aaPredicted RBP23.15■■□□□ 1.3
CPSF7-225ENST00000545934 ITPK1Q13572 414 aa23.15■■□□□ 1.3
CPSF7-225ENST00000545934 C4AP0C0L4 1744 aa23.14■■□□□ 1.3
CPSF7-225ENST00000545934 IFNL2Q8IZJ0 200 aa23.14■■□□□ 1.29
CPSF7-225ENST00000545934 TMOD3Q9NYL9 352 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms