RNA–Protein interactions for RNA: ENST00000545869.5

PDCD2-214, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-214ENST00000545869 HOXC9P31274 260 aa33.14■■■□□ 2.9
PDCD2-214ENST00000545869 CHD4Q14839 1912 aa33.14■■■□□ 2.9
PDCD2-214ENST00000545869 MAP3K5Q99683 1374 aa33.13■■■□□ 2.89
PDCD2-214ENST00000545869 KCNQ4P56696 695 aa33.13■■■□□ 2.89
PDCD2-214ENST00000545869 ZNF784Q8NCA9 323 aaPredicted RBP33.13■■■□□ 2.89
PDCD2-214ENST00000545869 LY75O60449 1722 aa33.13■■■□□ 2.89
PDCD2-214ENST00000545869 PNPLA7Q6ZV29 1317 aa33.1■■■□□ 2.89
PDCD2-214ENST00000545869 COG3Q96JB2 828 aa33.1■■■□□ 2.89
PDCD2-214ENST00000545869 EIF4G2P78344 907 aaKnown RBP eCLIP33.09■■■□□ 2.89
PDCD2-214ENST00000545869 ANKRD36BQ8N2N9 1353 aa33.09■■■□□ 2.89
PDCD2-214ENST00000545869 PRIM1P49642 420 aaKnown RBP33.08■■■□□ 2.89
PDCD2-214ENST00000545869 SLC27A3Q5K4L6 730 aa33.07■■■□□ 2.88
PDCD2-214ENST00000545869 AMPHP49418 695 aa33.05■■■□□ 2.88
PDCD2-214ENST00000545869 SYTL4Q96C24 671 aaPredicted RBP33.05■■■□□ 2.88
PDCD2-214ENST00000545869 RRS1Q15050 365 aaKnown RBP33.03■■■□□ 2.88
PDCD2-214ENST00000545869 RTL1A6NKG5 1358 aa33.02■■■□□ 2.88
PDCD2-214ENST00000545869 HSPA5P11021 654 aaKnown RBP33.02■■■□□ 2.88
PDCD2-214ENST00000545869 NBPF6Q5VWK0 638 aa33.01■■■□□ 2.87
PDCD2-214ENST00000545869 USHBP1Q8N6Y0 703 aa33.01■■■□□ 2.87
PDCD2-214ENST00000545869 ZCRB1Q8TBF4 217 aaKnown RBP33.01■■■□□ 2.87
PDCD2-214ENST00000545869 NBPF4Q96M43 638 aa33.01■■■□□ 2.87
PDCD2-214ENST00000545869 SLC16A10Q8TF71 515 aa32.99■■■□□ 2.87
PDCD2-214ENST00000545869 GGNBP2Q9H3C7 697 aa32.99■■■□□ 2.87
PDCD2-214ENST00000545869 FYB1O15117 783 aa32.98■■■□□ 2.87
PDCD2-214ENST00000545869 GOLGB1Q14789 3259 aaKnown RBP32.97■■■□□ 2.87
PDCD2-214ENST00000545869 KLHL34Q8N239 644 aa32.97■■■□□ 2.87
PDCD2-214ENST00000545869 TFCP2L1Q9NZI6 479 aa32.97■■■□□ 2.87
PDCD2-214ENST00000545869 KIF20BQ96Q89 1820 aa32.95■■■□□ 2.87
PDCD2-214ENST00000545869 SLC24A1O60721 1099 aa32.94■■■□□ 2.86
PDCD2-214ENST00000545869 NLGN2Q8NFZ4 835 aa32.94■■■□□ 2.86
PDCD2-214ENST00000545869 CCNL1Q9UK58 526 aaPredicted RBP32.93■■■□□ 2.86
PDCD2-214ENST00000545869 POLD1P28340 1107 aa32.92■■■□□ 2.86
PDCD2-214ENST00000545869 GPR162Q16538 588 aa32.91■■■□□ 2.86
PDCD2-214ENST00000545869 HSP90AB2PQ58FF8 381 aa32.9■■■□□ 2.86
PDCD2-214ENST00000545869 C5P01031 1676 aa32.9■■■□□ 2.86
PDCD2-214ENST00000545869 TOGARAM1Q9Y4F4 1720 aa32.9■■■□□ 2.86
PDCD2-214ENST00000545869 COL23A1Q86Y22 540 aaPredicted RBP32.88■■■□□ 2.85
PDCD2-214ENST00000545869 SMG6Q86US8 1419 aaKnown RBP32.86■■■□□ 2.85
PDCD2-214ENST00000545869 TAF1LQ8IZX4 1826 aa32.86■■■□□ 2.85
PDCD2-214ENST00000545869 INSRP06213 1382 aa32.86■■■□□ 2.85
PDCD2-214ENST00000545869 TMF1P82094 1093 aa32.86■■■□□ 2.85
PDCD2-214ENST00000545869 CGNL1Q0VF96 1302 aa32.85■■■□□ 2.85
PDCD2-214ENST00000545869 RAPGEF4Q8WZA2 1011 aa32.85■■■□□ 2.85
PDCD2-214ENST00000545869 PELP1Q8IZL8 1130 aaKnown RBP32.84■■■□□ 2.85
PDCD2-214ENST00000545869 FLT4P35916 1363 aa32.83■■■□□ 2.85
PDCD2-214ENST00000545869 ITGB4P16144 1822 aa32.82■■■□□ 2.84
PDCD2-214ENST00000545869 TATP17735 454 aaPredicted RBP32.82■■■□□ 2.84
PDCD2-214ENST00000545869 MSL1Q68DK7 614 aa32.82■■■□□ 2.84
PDCD2-214ENST00000545869 PKD1L3Q7Z443 1732 aa32.82■■■□□ 2.84
PDCD2-214ENST00000545869 CYP27B1O15528 508 aa32.81■■■□□ 2.84
PDCD2-214ENST00000545869 CARD14Q9BXL6 1004 aa32.81■■■□□ 2.84
PDCD2-214ENST00000545869 YBX3P16989 372 aaKnown RBP eCLIP32.8■■■□□ 2.845e-10■■□□□ 12.2
PDCD2-214ENST00000545869 PCDH11XQ9BZA7 1347 aa32.79■■■□□ 2.84
PDCD2-214ENST00000545869 PCDH11YQ9BZA8 1340 aa32.79■■■□□ 2.84
PDCD2-214ENST00000545869 MSH5O43196 834 aa32.79■■■□□ 2.84
PDCD2-214ENST00000545869 C1QTNF8P60827 252 aa32.79■■■□□ 2.84
PDCD2-214ENST00000545869 PALLDQ8WX93 1383 aa32.79■■■□□ 2.84
PDCD2-214ENST00000545869 EMILIN1Q9Y6C2 1016 aa32.78■■■□□ 2.84
PDCD2-214ENST00000545869 ANKRD26Q9UPS8 1709 aa32.77■■■□□ 2.84
PDCD2-214ENST00000545869 NCAPD2Q15021 1401 aa32.77■■■□□ 2.84
PDCD2-214ENST00000545869 KIF24Q5T7B8 1368 aa32.76■■■□□ 2.83
PDCD2-214ENST00000545869 CDCA8Q53HL2 280 aa32.76■■■□□ 2.83
PDCD2-214ENST00000545869 AMIGO3Q86WK7 504 aa32.76■■■□□ 2.83
PDCD2-214ENST00000545869 NSD3Q9BZ95 1437 aa32.76■■■□□ 2.83
PDCD2-214ENST00000545869 C4BP0C0L5 1744 aa32.75■■■□□ 2.83
PDCD2-214ENST00000545869 SENP3-EIF4A1A0A087X0R7 540 aa32.75■■■□□ 2.83
PDCD2-214ENST00000545869 MPRIPQ6WCQ1 1025 aa32.74■■■□□ 2.83
PDCD2-214ENST00000545869 MAP2P11137 1827 aaKnown RBP32.72■■■□□ 2.83
PDCD2-214ENST00000545869 UBR3Q6ZT12 1888 aa32.71■■■□□ 2.83
PDCD2-214ENST00000545869 SMIM5Q71RC9 77 aa32.7■■■□□ 2.83
PDCD2-214ENST00000545869 PIGBQ92521 554 aa32.66■■■□□ 2.82
PDCD2-214ENST00000545869 GIGYF1O75420 1035 aaPredicted RBP32.64■■■□□ 2.82
PDCD2-214ENST00000545869 KIF7Q2M1P5 1343 aa32.64■■■□□ 2.82
PDCD2-214ENST00000545869 NKX1-1Q15270 411 aaPredicted RBP32.63■■■□□ 2.81
PDCD2-214ENST00000545869 PPM1GO15355 546 aaPredicted RBP32.62■■■□□ 2.81
PDCD2-214ENST00000545869 GRIN3BO60391 1043 aa32.62■■■□□ 2.81
PDCD2-214ENST00000545869 FLAD1Q8NFF5 587 aa32.61■■■□□ 2.81
PDCD2-214ENST00000545869 EYA1Q99502 592 aa32.61■■■□□ 2.81
PDCD2-214ENST00000545869 CD2APQ9Y5K6 639 aa32.61■■■□□ 2.81
PDCD2-214ENST00000545869 WASHC2AQ641Q2 1341 aa32.6■■■□□ 2.81
PDCD2-214ENST00000545869 SMARCC1Q92922 1105 aaPredicted RBP32.6■■■□□ 2.81
PDCD2-214ENST00000545869 PHF14O94880 888 aa32.59■■■□□ 2.81
PDCD2-214ENST00000545869 LINC00116Q8NCU8 138 aa32.59■■■□□ 2.81
PDCD2-214ENST00000545869 AK7Q96M32 723 aa32.59■■■□□ 2.81
PDCD2-214ENST00000545869 ATP10DQ9P241 1426 aa32.58■■■□□ 2.81
PDCD2-214ENST00000545869 POLR3GLQ9BT43 218 aa32.57■■■□□ 2.8
PDCD2-214ENST00000545869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.56■■■□□ 2.8
PDCD2-214ENST00000545869 ZNF316A6NFI3 1004 aaPredicted RBP32.56■■■□□ 2.8
PDCD2-214ENST00000545869 LOC102724428A0A0B4J2F2 783 aa32.55■■■□□ 2.8
PDCD2-214ENST00000545869 SIK1P57059 783 aa32.55■■■□□ 2.8
PDCD2-214ENST00000545869 POLKQ9UBT6 870 aa32.55■■■□□ 2.8
PDCD2-214ENST00000545869 SPG7Q9UQ90 795 aa32.55■■■□□ 2.8
PDCD2-214ENST00000545869 ITPK1Q13572 414 aa32.54■■■□□ 2.8
PDCD2-214ENST00000545869 ASAP1Q9ULH1 1129 aa32.54■■■□□ 2.8
PDCD2-214ENST00000545869 WWC3Q9ULE0 1092 aa32.53■■■□□ 2.8
PDCD2-214ENST00000545869 ADCY9O60503 1353 aa32.53■■■□□ 2.8
PDCD2-214ENST00000545869 CEP350Q5VT06 3117 aa32.53■■■□□ 2.8
PDCD2-214ENST00000545869 PHKG2P15735 406 aa32.51■■■□□ 2.79
PDCD2-214ENST00000545869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.5■■■□□ 2.79
PDCD2-214ENST00000545869 TMOD3Q9NYL9 352 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms