RNA–Protein interactions for RNA: ENST00000545315.1

AP3B2-211, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 3

Gene AP3B2, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-211ENST00000545315 LRRC4BQ9NT99 713 aa13.77□□□□□ -0.21
AP3B2-211ENST00000545315 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
AP3B2-211ENST00000545315 YBX3P16989 372 aaKnown RBP eCLIP13.76□□□□□ -0.21
AP3B2-211ENST00000545315 LTV1Q96GA3 475 aaPredicted RBP13.76□□□□□ -0.21
AP3B2-211ENST00000545315 ATP10DQ9P241 1426 aa13.75□□□□□ -0.21
AP3B2-211ENST00000545315 GRIN3BO60391 1043 aa13.75□□□□□ -0.21
AP3B2-211ENST00000545315 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
AP3B2-211ENST00000545315 TUBGCP6Q96RT7 1819 aa13.75□□□□□ -0.21
AP3B2-211ENST00000545315 HSPA6P17066 643 aa13.74□□□□□ -0.21
AP3B2-211ENST00000545315 USP54Q70EL1 1684 aa13.73□□□□□ -0.21
AP3B2-211ENST00000545315 MAP3K19Q56UN5 1328 aa13.73□□□□□ -0.21
AP3B2-211ENST00000545315 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
AP3B2-211ENST00000545315 AMPHP49418 695 aa13.73□□□□□ -0.21
AP3B2-211ENST00000545315 DDX54Q8TDD1 881 aaKnown RBP13.73□□□□□ -0.21
AP3B2-211ENST00000545315 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
AP3B2-211ENST00000545315 HOXC9P31274 260 aa13.72□□□□□ -0.21
AP3B2-211ENST00000545315 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
AP3B2-211ENST00000545315 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.21
AP3B2-211ENST00000545315 FBLN1P23142 703 aa13.71□□□□□ -0.21
AP3B2-211ENST00000545315 TMF1P82094 1093 aa13.71□□□□□ -0.21
AP3B2-211ENST00000545315 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
AP3B2-211ENST00000545315 ZNF526Q8TF50 670 aaPredicted RBP13.7□□□□□ -0.22
AP3B2-211ENST00000545315 KCNQ4P56696 695 aa13.69□□□□□ -0.22
AP3B2-211ENST00000545315 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
AP3B2-211ENST00000545315 FYB1O15117 783 aa13.68□□□□□ -0.22
AP3B2-211ENST00000545315 RRS1Q15050 365 aaKnown RBP13.68□□□□□ -0.22
AP3B2-211ENST00000545315 ZCRB1Q8TBF4 217 aaKnown RBP13.68□□□□□ -0.22
AP3B2-211ENST00000545315 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
AP3B2-211ENST00000545315 RTL1A6NKG5 1358 aa13.68□□□□□ -0.22
AP3B2-211ENST00000545315 USP47Q96K76 1375 aa13.68□□□□□ -0.22
AP3B2-211ENST00000545315 MSH5O43196 834 aa13.67□□□□□ -0.22
AP3B2-211ENST00000545315 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
AP3B2-211ENST00000545315 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
AP3B2-211ENST00000545315 LTN1O94822 1766 aa13.66□□□□□ -0.22
AP3B2-211ENST00000545315 NBPF6Q5VWK0 638 aa13.66□□□□□ -0.22
AP3B2-211ENST00000545315 NBPF4Q96M43 638 aa13.66□□□□□ -0.22
AP3B2-211ENST00000545315 ADCY9O60503 1353 aa13.66□□□□□ -0.22
AP3B2-211ENST00000545315 LY75O60449 1722 aa13.65□□□□□ -0.22
AP3B2-211ENST00000545315 RAPGEF4Q8WZA2 1011 aa13.65□□□□□ -0.22
AP3B2-211ENST00000545315 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
AP3B2-211ENST00000545315 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
AP3B2-211ENST00000545315 MSL1Q68DK7 614 aa13.64□□□□□ -0.23
AP3B2-211ENST00000545315 USHBP1Q8N6Y0 703 aa13.64□□□□□ -0.23
AP3B2-211ENST00000545315 MEGF6O75095 1541 aa13.64□□□□□ -0.23
AP3B2-211ENST00000545315 HSP90AB2PQ58FF8 381 aa13.63□□□□□ -0.23
AP3B2-211ENST00000545315 COL23A1Q86Y22 540 aaPredicted RBP13.63□□□□□ -0.23
AP3B2-211ENST00000545315 DOT1LQ8TEK3 1739 aa13.62□□□□□ -0.23
AP3B2-211ENST00000545315 NSD2O96028 1365 aa13.62□□□□□ -0.23
AP3B2-211ENST00000545315 TATP17735 454 aaPredicted RBP13.62□□□□□ -0.23
AP3B2-211ENST00000545315 CCNL1Q9UK58 526 aaPredicted RBP13.62□□□□□ -0.23
AP3B2-211ENST00000545315 INSRP06213 1382 aa13.61□□□□□ -0.23
AP3B2-211ENST00000545315 FLT4P35916 1363 aa13.61□□□□□ -0.23
AP3B2-211ENST00000545315 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
AP3B2-211ENST00000545315 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
AP3B2-211ENST00000545315 KIF24Q5T7B8 1368 aa13.6□□□□□ -0.23
AP3B2-211ENST00000545315 KIF3CO14782 793 aa13.6□□□□□ -0.23
AP3B2-211ENST00000545315 APLP1P51693 650 aa13.6□□□□□ -0.23
AP3B2-211ENST00000545315 PCDH11XQ9BZA7 1347 aa13.6□□□□□ -0.23
AP3B2-211ENST00000545315 PCDH11YQ9BZA8 1340 aa13.6□□□□□ -0.23
AP3B2-211ENST00000545315 CARD14Q9BXL6 1004 aa13.59□□□□□ -0.23
AP3B2-211ENST00000545315 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
AP3B2-211ENST00000545315 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
AP3B2-211ENST00000545315 EMILIN1Q9Y6C2 1016 aa13.58□□□□□ -0.24
AP3B2-211ENST00000545315 NSD3Q9BZ95 1437 aa13.57□□□□□ -0.24
AP3B2-211ENST00000545315 DNAJC5GQ8N7S2 189 aa13.57□□□□□ -0.24
AP3B2-211ENST00000545315 C5P01031 1676 aa13.56□□□□□ -0.24
AP3B2-211ENST00000545315 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
AP3B2-211ENST00000545315 CAPN15O75808 1086 aa13.56□□□□□ -0.24
AP3B2-211ENST00000545315 HMGB2P26583 209 aaKnown RBP13.56□□□□□ -0.24
AP3B2-211ENST00000545315 CYP27B1O15528 508 aa13.55□□□□□ -0.24
AP3B2-211ENST00000545315 MPRIPQ6WCQ1 1025 aa13.55□□□□□ -0.24
AP3B2-211ENST00000545315 IGSF1Q8N6C5 1336 aa13.55□□□□□ -0.24
AP3B2-211ENST00000545315 COL13A1Q5TAT6 717 aaPredicted RBP13.54□□□□□ -0.24
AP3B2-211ENST00000545315 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
AP3B2-211ENST00000545315 TAF1LQ8IZX4 1826 aa13.53□□□□□ -0.24
AP3B2-211ENST00000545315 FLAD1Q8NFF5 587 aa13.53□□□□□ -0.24
AP3B2-211ENST00000545315 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
AP3B2-211ENST00000545315 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
AP3B2-211ENST00000545315 SPG7Q9UQ90 795 aa13.53□□□□□ -0.24
AP3B2-211ENST00000545315 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
AP3B2-211ENST00000545315 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
AP3B2-211ENST00000545315 RGPD2P0DJD1 1756 aa13.53□□□□□ -0.24
AP3B2-211ENST00000545315 TOMM70O94826 608 aa13.52□□□□□ -0.25
AP3B2-211ENST00000545315 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
AP3B2-211ENST00000545315 EYA1Q99502 592 aa13.51□□□□□ -0.25
AP3B2-211ENST00000545315 NCAPD2Q15021 1401 aa13.5□□□□□ -0.25
AP3B2-211ENST00000545315 PIGBQ92521 554 aa13.5□□□□□ -0.25
AP3B2-211ENST00000545315 AK7Q96M32 723 aa13.5□□□□□ -0.25
AP3B2-211ENST00000545315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.25
AP3B2-211ENST00000545315 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
AP3B2-211ENST00000545315 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
AP3B2-211ENST00000545315 C4BP0C0L5 1744 aa13.48□□□□□ -0.25
AP3B2-211ENST00000545315 TOGARAM1Q9Y4F4 1720 aa13.48□□□□□ -0.25
AP3B2-211ENST00000545315 TNNT2P45379 298 aaPredicted RBP13.48□□□□□ -0.25
AP3B2-211ENST00000545315 HTRA3P83110 453 aa13.48□□□□□ -0.25
AP3B2-211ENST00000545315 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
AP3B2-211ENST00000545315 TNS4Q8IZW8 715 aa13.48□□□□□ -0.25
AP3B2-211ENST00000545315 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
AP3B2-211ENST00000545315 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
AP3B2-211ENST00000545315 LOC102724428A0A0B4J2F2 783 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms