RNA–Protein interactions for RNA: ENST00000545223.1

PRKAB1-208, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 2

Gene PRKAB1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-208ENST00000545223 PLEKHF1Q96S99 279 aa9.66□□□□□ -0.86
PRKAB1-208ENST00000545223 MEGF6O75095 1541 aa9.66□□□□□ -0.86
PRKAB1-208ENST00000545223 NCAPD2Q15021 1401 aa9.65□□□□□ -0.86
PRKAB1-208ENST00000545223 KDRP35968 1356 aa9.65□□□□□ -0.86
PRKAB1-208ENST00000545223 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
PRKAB1-208ENST00000545223 FCHSD2O94868 740 aa9.64□□□□□ -0.87
PRKAB1-208ENST00000545223 IL2RBP14784 551 aa9.64□□□□□ -0.87
PRKAB1-208ENST00000545223 BARGINQ6ZT62 677 aa9.64□□□□□ -0.87
PRKAB1-208ENST00000545223 DISP2A7MBM2 1401 aa9.64□□□□□ -0.87
PRKAB1-208ENST00000545223 TATP17735 454 aaPredicted RBP9.63□□□□□ -0.87
PRKAB1-208ENST00000545223 RBM6P78332 1123 aaKnown RBP9.63□□□□□ -0.87
PRKAB1-208ENST00000545223 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
PRKAB1-208ENST00000545223 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
PRKAB1-208ENST00000545223 THRAP3Q9Y2W1 955 aaKnown RBP9.63□□□□□ -0.87
PRKAB1-208ENST00000545223 RRP7AQ9Y3A4 280 aaKnown RBP9.63□□□□□ -0.87
PRKAB1-208ENST00000545223 APAF1O14727 1248 aa9.62□□□□□ -0.87
PRKAB1-208ENST00000545223 ONECUT3O60422 494 aaPredicted RBP9.62□□□□□ -0.87
PRKAB1-208ENST00000545223 RXRBP28702 533 aa9.62□□□□□ -0.87
PRKAB1-208ENST00000545223 FAM182BQ5T319 152 aa9.62□□□□□ -0.87
PRKAB1-208ENST00000545223 SEPT12Q8IYM1 358 aa9.62□□□□□ -0.87
PRKAB1-208ENST00000545223 SALL2Q9Y467 1007 aaPredicted RBP9.62□□□□□ -0.87
PRKAB1-208ENST00000545223 A0A0G2JS52 829 aa9.61□□□□□ -0.87
PRKAB1-208ENST00000545223 EXOC5O00471 708 aa9.61□□□□□ -0.87
PRKAB1-208ENST00000545223 CYP27B1O15528 508 aa9.61□□□□□ -0.87
PRKAB1-208ENST00000545223 MYT1Q01538 1121 aa9.61□□□□□ -0.87
PRKAB1-208ENST00000545223 NEUROD2Q15784 382 aa9.61□□□□□ -0.87
PRKAB1-208ENST00000545223 ZCRB1Q8TBF4 217 aaKnown RBP9.61□□□□□ -0.87
PRKAB1-208ENST00000545223 DDX54Q8TDD1 881 aaKnown RBP9.61□□□□□ -0.87
PRKAB1-208ENST00000545223 RUNDC1Q96C34 613 aa9.61□□□□□ -0.87
PRKAB1-208ENST00000545223 OVOS2A0A0G2JMS6 1433 aa9.6□□□□□ -0.87
PRKAB1-208ENST00000545223 DDB1Q16531 1140 aa9.6□□□□□ -0.87
PRKAB1-208ENST00000545223 PLEKHO1Q53GL0 409 aaPredicted RBP9.6□□□□□ -0.87
PRKAB1-208ENST00000545223 MARCH10Q8NA82 808 aaPredicted RBP9.6□□□□□ -0.87
PRKAB1-208ENST00000545223 WNK3Q9BYP7 1800 aa9.6□□□□□ -0.87
PRKAB1-208ENST00000545223 THSD7AQ9UPZ6 1657 aa9.59□□□□□ -0.87
PRKAB1-208ENST00000545223 TMPOP42166 694 aaKnown RBP9.59□□□□□ -0.87
PRKAB1-208ENST00000545223 DCTN1Q14203 1278 aa9.59□□□□□ -0.87
PRKAB1-208ENST00000545223 ZNF530Q6P9A1 599 aaPredicted RBP9.59□□□□□ -0.87
PRKAB1-208ENST00000545223 LGR6Q9HBX8 967 aa9.59□□□□□ -0.87
PRKAB1-208ENST00000545223 LRRC37A3O60309 1634 aa9.59□□□□□ -0.87
PRKAB1-208ENST00000545223 SHANK3Q9BYB0 1731 aa9.59□□□□□ -0.87
PRKAB1-208ENST00000545223 MAPK8IP3Q9UPT6 1336 aa9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 PHKG2P15735 406 aa9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 RIPK4P57078 832 aa9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 AMOTQ4VCS5 1084 aa9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 MPRIPQ6WCQ1 1025 aa9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 THUMPD2Q9BTF0 503 aaKnown RBP9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 CDCA7Q9BWT1 371 aaPredicted RBP9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 PNNQ9H307 717 aaKnown RBP9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 SPG7Q9UQ90 795 aa9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 PARP4Q9UKK3 1724 aaKnown RBP9.58□□□□□ -0.88
PRKAB1-208ENST00000545223 RGS12O14924 1447 aa9.57□□□□□ -0.88
PRKAB1-208ENST00000545223 PKD1L3Q7Z443 1732 aa9.57□□□□□ -0.88
PRKAB1-208ENST00000545223 MCM10Q7L590 875 aa9.57□□□□□ -0.88
PRKAB1-208ENST00000545223 IFNL2Q8IZJ0 200 aa9.57□□□□□ -0.88
PRKAB1-208ENST00000545223 IL17REQ8NFR9 667 aa9.57□□□□□ -0.88
PRKAB1-208ENST00000545223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.57□□□□□ -0.88
PRKAB1-208ENST00000545223 TRIM35Q9UPQ4 493 aa9.57□□□□□ -0.88
PRKAB1-208ENST00000545223 CEP350Q5VT06 3117 aa9.57□□□□□ -0.88
PRKAB1-208ENST00000545223 TNS2Q63HR2 1409 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 NEFMP07197 916 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 PDE3BQ13370 1112 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 AKAP4Q5JQC9 854 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 YTHDC1Q96MU7 727 aaKnown RBP9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 PCDH11XQ9BZA7 1347 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 PCDH11YQ9BZA8 1340 aa9.56□□□□□ -0.88
PRKAB1-208ENST00000545223 DLG5Q8TDM6 1919 aa9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 DCAF8L1A6NGE4 600 aa9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 GNAT3A8MTJ3 354 aa9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 RNMTO43148 476 aaKnown RBP9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 HNRNPUQ00839 825 aaKnown RBP eCLIP9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 C1orf141Q5JVX7 400 aa9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 KRT27Q7Z3Y8 459 aa9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 ACSBG1Q96GR2 724 aa9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 KDM6AO15550 1401 aaPredicted RBP9.55□□□□□ -0.88
PRKAB1-208ENST00000545223 MAP3K5Q99683 1374 aa9.54□□□□□ -0.88
PRKAB1-208ENST00000545223 KCNQ2O43526 872 aa9.54□□□□□ -0.88
PRKAB1-208ENST00000545223 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
PRKAB1-208ENST00000545223 WWC1Q8IX03 1113 aa9.53□□□□□ -0.88
PRKAB1-208ENST00000545223 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
PRKAB1-208ENST00000545223 MIS18AQ9NYP9 233 aa9.53□□□□□ -0.88
PRKAB1-208ENST00000545223 PRIM1P49642 420 aaKnown RBP9.52□□□□□ -0.89
PRKAB1-208ENST00000545223 NFATC2IPQ8NCF5 419 aa9.52□□□□□ -0.89
PRKAB1-208ENST00000545223 RTF1Q92541 710 aaKnown RBP9.52□□□□□ -0.89
PRKAB1-208ENST00000545223 DCAF5Q96JK2 942 aa9.52□□□□□ -0.89
PRKAB1-208ENST00000545223 TOGARAM1Q9Y4F4 1720 aa9.52□□□□□ -0.89
PRKAB1-208ENST00000545223 PLEKHG2Q9H7P9 1386 aa9.51□□□□□ -0.89
PRKAB1-208ENST00000545223 KCNQ3O43525 872 aa9.51□□□□□ -0.89
PRKAB1-208ENST00000545223 HTATSF1O43719 755 aaKnown RBP9.51□□□□□ -0.89
PRKAB1-208ENST00000545223 CCDC27Q2M243 656 aa9.51□□□□□ -0.89
PRKAB1-208ENST00000545223 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
PRKAB1-208ENST00000545223 CDCA7LQ96GN5 454 aa9.51□□□□□ -0.89
PRKAB1-208ENST00000545223 ZNF521Q96K83 1311 aa9.51□□□□□ -0.89
PRKAB1-208ENST00000545223 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
PRKAB1-208ENST00000545223 HSP90AB1P08238 724 aaKnown RBP9.5□□□□□ -0.89
PRKAB1-208ENST00000545223 CABP4P57796 275 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms