RNA–Protein interactions for RNA: ENST00000545181.5

LINC00494-204, long intergenic non-protein coding RNA 494, humanhuman

TSL 5

Gene LINC00494, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-204ENST00000545181 PKNOX2Q96KN3 472 aa13.23□□□□□ -0.29
LINC00494-204ENST00000545181 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
LINC00494-204ENST00000545181 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
LINC00494-204ENST00000545181 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
LINC00494-204ENST00000545181 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
LINC00494-204ENST00000545181 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.23□□□□□ -0.29
LINC00494-204ENST00000545181 ZGPATQ8N5A5 531 aaKnown RBP13.23□□□□□ -0.29
LINC00494-204ENST00000545181 CEP85Q6P2H3 762 aa13.22□□□□□ -0.29
LINC00494-204ENST00000545181 EMILIN1Q9Y6C2 1016 aa13.22□□□□□ -0.29
LINC00494-204ENST00000545181 RICTORQ6R327 1708 aa13.22□□□□□ -0.29
LINC00494-204ENST00000545181 RPAP2Q8IXW5 612 aaPredicted RBP13.22□□□□□ -0.29
LINC00494-204ENST00000545181 ANP32BQ92688 251 aaKnown RBP13.22□□□□□ -0.29
LINC00494-204ENST00000545181 NEO1Q92859 1461 aa13.22□□□□□ -0.29
LINC00494-204ENST00000545181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00494-204ENST00000545181 EDC4Q6P2E9 1401 aaKnown RBP13.21□□□□□ -0.29
LINC00494-204ENST00000545181 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.3
LINC00494-204ENST00000545181 RTL1A6NKG5 1358 aa13.21□□□□□ -0.3
LINC00494-204ENST00000545181 NRKQ7Z2Y5 1582 aa13.21□□□□□ -0.3
LINC00494-204ENST00000545181 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
LINC00494-204ENST00000545181 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
LINC00494-204ENST00000545181 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
LINC00494-204ENST00000545181 PRPF40AO75400 957 aaKnown RBP13.2□□□□□ -0.3
LINC00494-204ENST00000545181 RBM27Q9P2N5 1060 aaKnown RBP13.2□□□□□ -0.3
LINC00494-204ENST00000545181 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
LINC00494-204ENST00000545181 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
LINC00494-204ENST00000545181 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
LINC00494-204ENST00000545181 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
LINC00494-204ENST00000545181 ST18O60284 1047 aa13.19□□□□□ -0.3
LINC00494-204ENST00000545181 RAPGEF3O95398 923 aa13.18□□□□□ -0.3
LINC00494-204ENST00000545181 MCM5P33992 734 aa13.18□□□□□ -0.3
LINC00494-204ENST00000545181 SENP3Q9H4L4 574 aaPredicted RBP13.18□□□□□ -0.3
LINC00494-204ENST00000545181 ZKSCAN5Q9Y2L8 839 aa13.18□□□□□ -0.3
LINC00494-204ENST00000545181 CPS1P31327 1500 aa13.18□□□□□ -0.3
LINC00494-204ENST00000545181 C3P01024 1663 aa13.18□□□□□ -0.3
LINC00494-204ENST00000545181 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
LINC00494-204ENST00000545181 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
LINC00494-204ENST00000545181 KIAA0232Q92628 1395 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 MSH6P52701 1360 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 CHL1O00533 1208 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 NME9Q86XW9 330 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 CHAMP1Q96JM3 812 aa13.17□□□□□ -0.3
LINC00494-204ENST00000545181 REC8O95072 547 aa13.16□□□□□ -0.3
LINC00494-204ENST00000545181 ERC2O15083 957 aa13.16□□□□□ -0.3
LINC00494-204ENST00000545181 CUL4AQ13619 759 aa13.16□□□□□ -0.3
LINC00494-204ENST00000545181 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
LINC00494-204ENST00000545181 WAPLQ7Z5K2 1190 aa13.16□□□□□ -0.3
LINC00494-204ENST00000545181 PTPRCP08575 1304 aa13.15□□□□□ -0.3
LINC00494-204ENST00000545181 BRD1O95696 1058 aa13.15□□□□□ -0.3
LINC00494-204ENST00000545181 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
LINC00494-204ENST00000545181 MEIS3Q99687 375 aa13.15□□□□□ -0.3
LINC00494-204ENST00000545181 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.31
LINC00494-204ENST00000545181 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.31
LINC00494-204ENST00000545181 KRT24Q2M2I5 525 aa13.15□□□□□ -0.31
LINC00494-204ENST00000545181 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.31
LINC00494-204ENST00000545181 TMX3Q96JJ7 454 aa13.14□□□□□ -0.31
LINC00494-204ENST00000545181 SYCE3A1L190 88 aa13.14□□□□□ -0.31
LINC00494-204ENST00000545181 PDE1AP54750 535 aa13.13□□□□□ -0.31
LINC00494-204ENST00000545181 NRXN3Q9Y4C0 1643 aa13.13□□□□□ -0.31
LINC00494-204ENST00000545181 CRB1P82279 1406 aa13.13□□□□□ -0.31
LINC00494-204ENST00000545181 MBD3O95983 291 aa13.13□□□□□ -0.31
LINC00494-204ENST00000545181 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
LINC00494-204ENST00000545181 CCDC39Q9UFE4 941 aa13.13□□□□□ -0.31
LINC00494-204ENST00000545181 CSPP1Q1MSJ5 1256 aa13.12□□□□□ -0.31
LINC00494-204ENST00000545181 MAP7D2Q96T17 732 aa13.12□□□□□ -0.31
LINC00494-204ENST00000545181 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
LINC00494-204ENST00000545181 RBM10P98175 930 aaKnown RBP13.12□□□□□ -0.31
LINC00494-204ENST00000545181 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
LINC00494-204ENST00000545181 MCM2P49736 904 aa13.11□□□□□ -0.31
LINC00494-204ENST00000545181 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
LINC00494-204ENST00000545181 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
LINC00494-204ENST00000545181 HAP1P54257 671 aaPredicted RBP13.11□□□□□ -0.31
LINC00494-204ENST00000545181 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC00494-204ENST00000545181 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
LINC00494-204ENST00000545181 ITSN1Q15811 1721 aa13.11□□□□□ -0.31
LINC00494-204ENST00000545181 UQCRHLA0A096LP55 91 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 UQCRHP07919 91 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 NEK4P51957 841 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 DYNC1I1O14576 645 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 ANAPC15P60006 121 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 COG3Q96JB2 828 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 PALD1Q9ULE6 856 aa13.1□□□□□ -0.31
LINC00494-204ENST00000545181 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
LINC00494-204ENST00000545181 APBB1O00213 710 aa13.09□□□□□ -0.31
LINC00494-204ENST00000545181 SASS6Q6UVJ0 657 aa13.08□□□□□ -0.31
LINC00494-204ENST00000545181 SSH2Q76I76 1423 aa13.08□□□□□ -0.32
LINC00494-204ENST00000545181 N4BP2Q86UW6 1770 aaPredicted RBP13.08□□□□□ -0.32
LINC00494-204ENST00000545181 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
LINC00494-204ENST00000545181 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
LINC00494-204ENST00000545181 HMMRO75330 724 aa13.08□□□□□ -0.32
LINC00494-204ENST00000545181 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
LINC00494-204ENST00000545181 MCM10Q7L590 875 aa13.08□□□□□ -0.32
LINC00494-204ENST00000545181 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
LINC00494-204ENST00000545181 NUDT16Q96DE0 195 aaKnown RBP13.07□□□□□ -0.32
LINC00494-204ENST00000545181 PRDM4Q9UKN5 801 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms