RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 RRS1Q15050 365 aaKnown RBP17.3■□□□□ 0.36
ACTN1-206ENST00000544964 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
ACTN1-206ENST00000544964 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
ACTN1-206ENST00000544964 GGNBP2Q9H3C7 697 aa17.3■□□□□ 0.36
ACTN1-206ENST00000544964 LRRC4BQ9NT99 713 aa17.3■□□□□ 0.36
ACTN1-206ENST00000544964 AMPHP49418 695 aa17.29■□□□□ 0.36
ACTN1-206ENST00000544964 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
ACTN1-206ENST00000544964 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
ACTN1-206ENST00000544964 MTFR1LQ9H019 292 aa17.27■□□□□ 0.36
ACTN1-206ENST00000544964 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.35
ACTN1-206ENST00000544964 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.35
ACTN1-206ENST00000544964 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
ACTN1-206ENST00000544964 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
ACTN1-206ENST00000544964 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
ACTN1-206ENST00000544964 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
ACTN1-206ENST00000544964 INSRP06213 1382 aa17.26■□□□□ 0.35
ACTN1-206ENST00000544964 FLT4P35916 1363 aa17.26■□□□□ 0.35
ACTN1-206ENST00000544964 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
ACTN1-206ENST00000544964 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
ACTN1-206ENST00000544964 CARD14Q9BXL6 1004 aa17.25■□□□□ 0.35
ACTN1-206ENST00000544964 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
ACTN1-206ENST00000544964 NCAPD2Q15021 1401 aa17.24■□□□□ 0.35
ACTN1-206ENST00000544964 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
ACTN1-206ENST00000544964 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
ACTN1-206ENST00000544964 C5P01031 1676 aa17.23■□□□□ 0.35
ACTN1-206ENST00000544964 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
ACTN1-206ENST00000544964 YY1P25490 414 aa17.23■□□□□ 0.35
ACTN1-206ENST00000544964 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
ACTN1-206ENST00000544964 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
ACTN1-206ENST00000544964 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
ACTN1-206ENST00000544964 POLR3GLQ9BT43 218 aa17.23■□□□□ 0.35
ACTN1-206ENST00000544964 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
ACTN1-206ENST00000544964 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
ACTN1-206ENST00000544964 ITGB4P16144 1822 aa17.22■□□□□ 0.35
ACTN1-206ENST00000544964 MAP3K5Q99683 1374 aa17.22■□□□□ 0.35
ACTN1-206ENST00000544964 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.35
ACTN1-206ENST00000544964 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
ACTN1-206ENST00000544964 KCNQ4P56696 695 aa17.21■□□□□ 0.35
ACTN1-206ENST00000544964 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
ACTN1-206ENST00000544964 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
ACTN1-206ENST00000544964 PNPLA7Q6ZV29 1317 aa17.21■□□□□ 0.34
ACTN1-206ENST00000544964 CHD4Q14839 1912 aa17.19■□□□□ 0.34
ACTN1-206ENST00000544964 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
ACTN1-206ENST00000544964 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
ACTN1-206ENST00000544964 ARXQ96QS3 562 aa17.18■□□□□ 0.34
ACTN1-206ENST00000544964 PCDH11XQ9BZA7 1347 aa17.18■□□□□ 0.34
ACTN1-206ENST00000544964 PCDH11YQ9BZA8 1340 aa17.18■□□□□ 0.34
ACTN1-206ENST00000544964 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
ACTN1-206ENST00000544964 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
ACTN1-206ENST00000544964 CYP27B1O15528 508 aa17.15■□□□□ 0.34
ACTN1-206ENST00000544964 TATP17735 454 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-206ENST00000544964 CCNL1Q9UK58 526 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-206ENST00000544964 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
ACTN1-206ENST00000544964 TFCP2L1Q9NZI6 479 aa17.14■□□□□ 0.33
ACTN1-206ENST00000544964 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
ACTN1-206ENST00000544964 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
ACTN1-206ENST00000544964 UBR3Q6ZT12 1888 aa17.13■□□□□ 0.33
ACTN1-206ENST00000544964 PALLDQ8WX93 1383 aa17.13■□□□□ 0.33
ACTN1-206ENST00000544964 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
ACTN1-206ENST00000544964 PPM1GO15355 546 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-206ENST00000544964 COL23A1Q86Y22 540 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-206ENST00000544964 EYA1Q99502 592 aa17.09■□□□□ 0.33
ACTN1-206ENST00000544964 POLD1P28340 1107 aa17.08■□□□□ 0.32
ACTN1-206ENST00000544964 MPRIPQ6WCQ1 1025 aa17.08■□□□□ 0.32
ACTN1-206ENST00000544964 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-206ENST00000544964 AMIGO3Q86WK7 504 aa17.06■□□□□ 0.32
ACTN1-206ENST00000544964 ZNF784Q8NCA9 323 aaPredicted RBP17.06■□□□□ 0.32
ACTN1-206ENST00000544964 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
ACTN1-206ENST00000544964 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
ACTN1-206ENST00000544964 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-206ENST00000544964 EIF4A2Q14240 407 aaKnown RBP17.05■□□□□ 0.32
ACTN1-206ENST00000544964 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
ACTN1-206ENST00000544964 PIGBQ92521 554 aa17.05■□□□□ 0.32
ACTN1-206ENST00000544964 PANK3Q9H999 370 aa17.05■□□□□ 0.32
ACTN1-206ENST00000544964 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
ACTN1-206ENST00000544964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
ACTN1-206ENST00000544964 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-206ENST00000544964 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
ACTN1-206ENST00000544964 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
ACTN1-206ENST00000544964 IGSF1Q8N6C5 1336 aa17.02■□□□□ 0.32
ACTN1-206ENST00000544964 PHKG2P15735 406 aa17.02■□□□□ 0.32
ACTN1-206ENST00000544964 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
ACTN1-206ENST00000544964 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
ACTN1-206ENST00000544964 MSH5O43196 834 aa17.01■□□□□ 0.31
ACTN1-206ENST00000544964 KDRP35968 1356 aa17.01■□□□□ 0.31
ACTN1-206ENST00000544964 GPR162Q16538 588 aa17■□□□□ 0.31
ACTN1-206ENST00000544964 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
ACTN1-206ENST00000544964 LOC102724428A0A0B4J2F2 783 aa16.99■□□□□ 0.31
ACTN1-206ENST00000544964 SIK1P57059 783 aa16.99■□□□□ 0.31
ACTN1-206ENST00000544964 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
ACTN1-206ENST00000544964 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
ACTN1-206ENST00000544964 YBX3P16989 372 aaKnown RBP eCLIP16.98■□□□□ 0.319e-8■□□□□ 9.7
ACTN1-206ENST00000544964 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
ACTN1-206ENST00000544964 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
ACTN1-206ENST00000544964 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
ACTN1-206ENST00000544964 AK7Q96M32 723 aa16.98■□□□□ 0.31
ACTN1-206ENST00000544964 TMOD3Q9NYL9 352 aa16.98■□□□□ 0.31
ACTN1-206ENST00000544964 ASAP1Q9ULH1 1129 aa16.98■□□□□ 0.31
ACTN1-206ENST00000544964 ITPK1Q13572 414 aa16.97■□□□□ 0.31
ACTN1-206ENST00000544964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms