RNA–Protein interactions for RNA: ENST00000544869.5

LINC01965-203, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4

Gene LINC01965, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-203ENST00000544869 TMF1P82094 1093 aa16.5■□□□□ 0.23
LINC01965-203ENST00000544869 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
LINC01965-203ENST00000544869 ARXQ96QS3 562 aa16.5■□□□□ 0.23
LINC01965-203ENST00000544869 LY75O60449 1722 aa16.5■□□□□ 0.23
LINC01965-203ENST00000544869 NSD2O96028 1365 aa16.5■□□□□ 0.23
LINC01965-203ENST00000544869 USP47Q96K76 1375 aa16.5■□□□□ 0.23
LINC01965-203ENST00000544869 SLC27A3Q5K4L6 730 aa16.49■□□□□ 0.23
LINC01965-203ENST00000544869 NBPF6Q5VWK0 638 aa16.49■□□□□ 0.23
LINC01965-203ENST00000544869 NBPF4Q96M43 638 aa16.49■□□□□ 0.23
LINC01965-203ENST00000544869 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
LINC01965-203ENST00000544869 KIF20BQ96Q89 1820 aa16.48■□□□□ 0.23
LINC01965-203ENST00000544869 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
LINC01965-203ENST00000544869 PNPLA7Q6ZV29 1317 aa16.47■□□□□ 0.23
LINC01965-203ENST00000544869 COL24A1Q17RW2 1714 aa16.46■□□□□ 0.23
LINC01965-203ENST00000544869 CHD4Q14839 1912 aa16.45■□□□□ 0.22
LINC01965-203ENST00000544869 SLC16A10Q8TF71 515 aa16.45■□□□□ 0.22
LINC01965-203ENST00000544869 TFCP2L1Q9NZI6 479 aa16.45■□□□□ 0.22
LINC01965-203ENST00000544869 MAP3K5Q99683 1374 aa16.45■□□□□ 0.22
LINC01965-203ENST00000544869 TRIM26Q12899 539 aaPredicted RBP16.44■□□□□ 0.22
LINC01965-203ENST00000544869 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
LINC01965-203ENST00000544869 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
LINC01965-203ENST00000544869 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
LINC01965-203ENST00000544869 INSRP06213 1382 aa16.43■□□□□ 0.22
LINC01965-203ENST00000544869 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
LINC01965-203ENST00000544869 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
LINC01965-203ENST00000544869 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
LINC01965-203ENST00000544869 POLD1P28340 1107 aa16.42■□□□□ 0.22
LINC01965-203ENST00000544869 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
LINC01965-203ENST00000544869 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
LINC01965-203ENST00000544869 CARD14Q9BXL6 1004 aa16.42■□□□□ 0.22
LINC01965-203ENST00000544869 FLT4P35916 1363 aa16.41■□□□□ 0.22
LINC01965-203ENST00000544869 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
LINC01965-203ENST00000544869 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
LINC01965-203ENST00000544869 GPR162Q16538 588 aa16.39■□□□□ 0.21
LINC01965-203ENST00000544869 EMILIN1Q9Y6C2 1016 aa16.39■□□□□ 0.21
LINC01965-203ENST00000544869 C5P01031 1676 aa16.39■□□□□ 0.21
LINC01965-203ENST00000544869 PCDH11XQ9BZA7 1347 aa16.39■□□□□ 0.21
LINC01965-203ENST00000544869 PCDH11YQ9BZA8 1340 aa16.39■□□□□ 0.21
LINC01965-203ENST00000544869 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
LINC01965-203ENST00000544869 ITGB4P16144 1822 aa16.38■□□□□ 0.21
LINC01965-203ENST00000544869 MSH5O43196 834 aa16.38■□□□□ 0.21
LINC01965-203ENST00000544869 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
LINC01965-203ENST00000544869 TOGARAM1Q9Y4F4 1720 aa16.38■□□□□ 0.21
LINC01965-203ENST00000544869 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
LINC01965-203ENST00000544869 CYP27B1O15528 508 aa16.37■□□□□ 0.21
LINC01965-203ENST00000544869 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
LINC01965-203ENST00000544869 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
LINC01965-203ENST00000544869 MPRIPQ6WCQ1 1025 aa16.36■□□□□ 0.21
LINC01965-203ENST00000544869 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
LINC01965-203ENST00000544869 PPM1GO15355 546 aaPredicted RBP16.35■□□□□ 0.21
LINC01965-203ENST00000544869 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
LINC01965-203ENST00000544869 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
LINC01965-203ENST00000544869 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
LINC01965-203ENST00000544869 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
LINC01965-203ENST00000544869 NCAPD2Q15021 1401 aa16.33■□□□□ 0.2
LINC01965-203ENST00000544869 C4BP0C0L5 1744 aa16.32■□□□□ 0.2
LINC01965-203ENST00000544869 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
LINC01965-203ENST00000544869 PIGBQ92521 554 aa16.31■□□□□ 0.2
LINC01965-203ENST00000544869 TIMELESSQ9UNS1 1208 aa16.31■□□□□ 0.2
LINC01965-203ENST00000544869 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC01965-203ENST00000544869 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
LINC01965-203ENST00000544869 SMARCC1Q92922 1105 aaPredicted RBP16.3■□□□□ 0.2
LINC01965-203ENST00000544869 EYA1Q99502 592 aa16.3■□□□□ 0.2
LINC01965-203ENST00000544869 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
LINC01965-203ENST00000544869 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
LINC01965-203ENST00000544869 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
LINC01965-203ENST00000544869 AMIGO3Q86WK7 504 aa16.29■□□□□ 0.2
LINC01965-203ENST00000544869 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
LINC01965-203ENST00000544869 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
LINC01965-203ENST00000544869 SMIM5Q71RC9 77 aa16.28■□□□□ 0.2
LINC01965-203ENST00000544869 UTRNP46939 3433 aa16.28■□□□□ 0.2
LINC01965-203ENST00000544869 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.2
LINC01965-203ENST00000544869 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.2
LINC01965-203ENST00000544869 C1QTNF8P60827 252 aa16.27■□□□□ 0.2
LINC01965-203ENST00000544869 AK7Q96M32 723 aa16.27■□□□□ 0.2
LINC01965-203ENST00000544869 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
LINC01965-203ENST00000544869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
LINC01965-203ENST00000544869 LOC102724428A0A0B4J2F2 783 aa16.25■□□□□ 0.19
LINC01965-203ENST00000544869 PHF14O94880 888 aa16.25■□□□□ 0.19
LINC01965-203ENST00000544869 SIK1P57059 783 aa16.25■□□□□ 0.19
LINC01965-203ENST00000544869 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
LINC01965-203ENST00000544869 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
LINC01965-203ENST00000544869 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
LINC01965-203ENST00000544869 ASAP1Q9ULH1 1129 aa16.25■□□□□ 0.19
LINC01965-203ENST00000544869 CD2APQ9Y5K6 639 aa16.25■□□□□ 0.19
LINC01965-203ENST00000544869 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
LINC01965-203ENST00000544869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
LINC01965-203ENST00000544869 GRIN3BO60391 1043 aa16.24■□□□□ 0.19
LINC01965-203ENST00000544869 PHKG2P15735 406 aa16.24■□□□□ 0.19
LINC01965-203ENST00000544869 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
LINC01965-203ENST00000544869 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
LINC01965-203ENST00000544869 ITPK1Q13572 414 aa16.23■□□□□ 0.19
LINC01965-203ENST00000544869 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
LINC01965-203ENST00000544869 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
LINC01965-203ENST00000544869 SSFA2P28290 1259 aa16.21■□□□□ 0.19
LINC01965-203ENST00000544869 ATP6V1AP38606 617 aa16.21■□□□□ 0.19
LINC01965-203ENST00000544869 PANK3Q9H999 370 aa16.21■□□□□ 0.19
LINC01965-203ENST00000544869 HSPA5P11021 654 aaKnown RBP16.2■□□□□ 0.18
LINC01965-203ENST00000544869 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
LINC01965-203ENST00000544869 GNPATO15228 680 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms