RNA–Protein interactions for RNA: ENST00000544643.5

CCDC189-209, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-209ENST00000544643 PCDHB15Q9Y5E8 787 aa25.61■■□□□ 1.69
CCDC189-209ENST00000544643 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
CCDC189-209ENST00000544643 ARHGEF25Q86VW2 580 aa25.61■■□□□ 1.69
CCDC189-209ENST00000544643 LMTK3Q96Q04 1460 aa25.61■■□□□ 1.69
CCDC189-209ENST00000544643 PDE4AP27815 886 aa25.59■■□□□ 1.69
CCDC189-209ENST00000544643 TMEM57Q8N5G2 664 aa25.59■■□□□ 1.69
CCDC189-209ENST00000544643 ALS2Q96Q42 1657 aa25.58■■□□□ 1.69
CCDC189-209ENST00000544643 ELL2O00472 640 aaPredicted RBP25.58■■□□□ 1.69
CCDC189-209ENST00000544643 SKAP1Q86WV1 359 aa25.58■■□□□ 1.69
CCDC189-209ENST00000544643 ITPRIPQ8IWB1 547 aa25.58■■□□□ 1.69
CCDC189-209ENST00000544643 RWDD1Q9H446 243 aaPredicted RBP25.58■■□□□ 1.69
CCDC189-209ENST00000544643 BACH2Q9BYV9 841 aa25.57■■□□□ 1.68
CCDC189-209ENST00000544643 LRRC37A3O60309 1634 aa25.56■■□□□ 1.68
CCDC189-209ENST00000544643 GNAT3A8MTJ3 354 aa25.56■■□□□ 1.68
CCDC189-209ENST00000544643 MSH6P52701 1360 aa25.56■■□□□ 1.68
CCDC189-209ENST00000544643 STRCQ7RTU9 1775 aa25.56■■□□□ 1.68
CCDC189-209ENST00000544643 LMOD2Q6P5Q4 547 aa25.55■■□□□ 1.68
CCDC189-209ENST00000544643 MAP3K5Q99683 1374 aa25.54■■□□□ 1.68
CCDC189-209ENST00000544643 NBPF6Q5VWK0 638 aa25.54■■□□□ 1.68
CCDC189-209ENST00000544643 NBPF4Q96M43 638 aa25.54■■□□□ 1.68
CCDC189-209ENST00000544643 CHMP4BQ9H444 224 aaKnown RBP25.54■■□□□ 1.68
CCDC189-209ENST00000544643 API5Q9BZZ5 524 aaKnown RBP25.53■■□□□ 1.68
CCDC189-209ENST00000544643 ZBTB40Q9NUA8 1239 aa25.53■■□□□ 1.68
CCDC189-209ENST00000544643 NCAPD2Q15021 1401 aa25.52■■□□□ 1.68
CCDC189-209ENST00000544643 NPHP3Q7Z494 1330 aa25.52■■□□□ 1.68
CCDC189-209ENST00000544643 ZBTB7CA1YPR0 619 aa25.51■■□□□ 1.67
CCDC189-209ENST00000544643 BABAM1Q9NWV8 329 aa25.51■■□□□ 1.67
CCDC189-209ENST00000544643 TSPYL4Q9UJ04 414 aa25.51■■□□□ 1.67
CCDC189-209ENST00000544643 ABCC4O15439 1325 aa25.51■■□□□ 1.67
CCDC189-209ENST00000544643 USHBP1Q8N6Y0 703 aa25.51■■□□□ 1.67
CCDC189-209ENST00000544643 XIRP1Q702N8 1843 aaKnown RBP25.5■■□□□ 1.67
CCDC189-209ENST00000544643 HDAC1Q13547 482 aaPredicted RBP25.5■■□□□ 1.67
CCDC189-209ENST00000544643 MED1Q15648 1581 aaPredicted RBP25.49■■□□□ 1.67
CCDC189-209ENST00000544643 KRT24Q2M2I5 525 aa25.48■■□□□ 1.67
CCDC189-209ENST00000544643 RGS3P49796 1198 aa25.47■■□□□ 1.67
CCDC189-209ENST00000544643 IL17REQ8NFR9 667 aa25.47■■□□□ 1.67
CCDC189-209ENST00000544643 CAMTA1Q9Y6Y1 1673 aa25.47■■□□□ 1.67
CCDC189-209ENST00000544643 RGPD2P0DJD1 1756 aa25.47■■□□□ 1.67
CCDC189-209ENST00000544643 ANKRD24Q8TF21 1146 aa25.46■■□□□ 1.67
CCDC189-209ENST00000544643 MIS18AQ9NYP9 233 aa25.46■■□□□ 1.67
CCDC189-209ENST00000544643 PXDNQ92626 1479 aa25.45■■□□□ 1.66
CCDC189-209ENST00000544643 TNS3Q68CZ2 1445 aa25.45■■□□□ 1.66
CCDC189-209ENST00000544643 SOS1Q07889 1333 aaPredicted RBP25.45■■□□□ 1.66
CCDC189-209ENST00000544643 ZBTB7BO15156 539 aaPredicted RBP25.45■■□□□ 1.66
CCDC189-209ENST00000544643 LRRC59Q96AG4 307 aaKnown RBP25.45■■□□□ 1.66
CCDC189-209ENST00000544643 TAF7Q15545 349 aaPredicted RBP25.44■■□□□ 1.66
CCDC189-209ENST00000544643 FAM161AQ3B820 660 aa25.44■■□□□ 1.66
CCDC189-209ENST00000544643 AMOTQ4VCS5 1084 aa25.44■■□□□ 1.66
CCDC189-209ENST00000544643 PLEKHO1Q53GL0 409 aaPredicted RBP25.44■■□□□ 1.66
CCDC189-209ENST00000544643 CEMIPQ8WUJ3 1361 aa25.43■■□□□ 1.66
CCDC189-209ENST00000544643 PTPRCP08575 1304 aa25.43■■□□□ 1.66
CCDC189-209ENST00000544643 DDX17Q92841 729 aaKnown RBP25.43■■□□□ 1.66
CCDC189-209ENST00000544643 ANP32AP39687 249 aaKnown RBP25.42■■□□□ 1.66
CCDC189-209ENST00000544643 AXIN2Q9Y2T1 843 aa25.42■■□□□ 1.66
CCDC189-209ENST00000544643 PDZRN3Q9UPQ7 1066 aa25.41■■□□□ 1.66
CCDC189-209ENST00000544643 SPATA31A3Q5VYP0 1347 aa25.41■■□□□ 1.66
CCDC189-209ENST00000544643 LMO7Q8WWI1 1683 aa25.41■■□□□ 1.66
CCDC189-209ENST00000544643 PLEKHG5O94827 1062 aa25.41■■□□□ 1.66
CCDC189-209ENST00000544643 AKAP4Q5JQC9 854 aa25.4■■□□□ 1.66
CCDC189-209ENST00000544643 ABCC6O95255 1503 aa25.4■■□□□ 1.66
CCDC189-209ENST00000544643 ZC3H6P61129 1189 aaKnown RBP25.39■■□□□ 1.66
CCDC189-209ENST00000544643 INTS3Q68E01 1043 aaKnown RBP25.39■■□□□ 1.66
CCDC189-209ENST00000544643 ERBB3P21860 1342 aa25.39■■□□□ 1.65
CCDC189-209ENST00000544643 RGS12O14924 1447 aa25.39■■□□□ 1.65
CCDC189-209ENST00000544643 C8orf34Q49A92 452 aa25.39■■□□□ 1.65
CCDC189-209ENST00000544643 SMC5Q8IY18 1101 aa25.39■■□□□ 1.65
CCDC189-209ENST00000544643 BRINP3Q76B58 766 aa25.38■■□□□ 1.65
CCDC189-209ENST00000544643 RGPD5Q99666 1765 aa25.38■■□□□ 1.65
CCDC189-209ENST00000544643 ZNF335Q9H4Z2 1342 aaPredicted RBP25.37■■□□□ 1.65
CCDC189-209ENST00000544643 MSH5O43196 834 aa25.37■■□□□ 1.65
CCDC189-209ENST00000544643 SLC4A2P04920 1241 aa25.36■■□□□ 1.65
CCDC189-209ENST00000544643 ZNF530Q6P9A1 599 aaPredicted RBP25.36■■□□□ 1.65
CCDC189-209ENST00000544643 CRYBG1Q9Y4K1 1723 aa25.36■■□□□ 1.65
CCDC189-209ENST00000544643 COL18A1P39060 1754 aa25.36■■□□□ 1.65
CCDC189-209ENST00000544643 OVOS2A0A0G2JMS6 1433 aa25.35■■□□□ 1.65
CCDC189-209ENST00000544643 CCDC30Q5VVM6 783 aa25.33■■□□□ 1.65
CCDC189-209ENST00000544643 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
CCDC189-209ENST00000544643 CPDO75976 1380 aa25.33■■□□□ 1.65
CCDC189-209ENST00000544643 STK31Q9BXU1 1019 aa25.33■■□□□ 1.65
CCDC189-209ENST00000544643 C1orf141Q5JVX7 400 aa25.32■■□□□ 1.64
CCDC189-209ENST00000544643 LGR6Q9HBX8 967 aa25.32■■□□□ 1.64
CCDC189-209ENST00000544643 IPO9Q96P70 1041 aaKnown RBP25.31■■□□□ 1.64
CCDC189-209ENST00000544643 FAM208AQ9UK61 1670 aaKnown RBP25.3■■□□□ 1.64
CCDC189-209ENST00000544643 PLEKHG2Q9H7P9 1386 aa25.3■■□□□ 1.64
CCDC189-209ENST00000544643 CACNA1FO60840 1977 aa25.3■■□□□ 1.64
CCDC189-209ENST00000544643 SOS2Q07890 1332 aaPredicted RBP25.3■■□□□ 1.64
CCDC189-209ENST00000544643 KDM3BQ7LBC6 1761 aa25.3■■□□□ 1.64
CCDC189-209ENST00000544643 RNMTO43148 476 aaKnown RBP25.29■■□□□ 1.64
CCDC189-209ENST00000544643 CABLES1Q8TDN4 633 aa25.29■■□□□ 1.64
CCDC189-209ENST00000544643 VIRMAQ69YN4 1812 aaKnown RBP25.29■■□□□ 1.64
CCDC189-209ENST00000544643 TEFQ10587 303 aa25.28■■□□□ 1.64
CCDC189-209ENST00000544643 GCC1Q96CN9 775 aa25.28■■□□□ 1.64
CCDC189-209ENST00000544643 CHMP4AQ9BY43 222 aa25.28■■□□□ 1.64
CCDC189-209ENST00000544643 HOXB7P09629 217 aa25.28■■□□□ 1.64
CCDC189-209ENST00000544643 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
CCDC189-209ENST00000544643 G2E3Q7L622 706 aa25.27■■□□□ 1.64
CCDC189-209ENST00000544643 EIF4A1P60842 406 aaKnown RBP25.26■■□□□ 1.63
CCDC189-209ENST00000544643 NUCB1Q02818 461 aa25.26■■□□□ 1.63
CCDC189-209ENST00000544643 NLRP2Q9NX02 1062 aa25.26■■□□□ 1.63
CCDC189-209ENST00000544643 MPRIPQ6WCQ1 1025 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms