RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 EIF4A2Q14240 407 aaKnown RBP17.96■□□□□ 0.47
CIT-214ENST00000544588 PEAK1Q9H792 1746 aa17.95■□□□□ 0.46
CIT-214ENST00000544588 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
CIT-214ENST00000544588 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
CIT-214ENST00000544588 SLC15A2Q16348 729 aa17.94■□□□□ 0.46
CIT-214ENST00000544588 SPON1Q9HCB6 807 aa17.94■□□□□ 0.46
CIT-214ENST00000544588 PPP1R1BQ9UD71 204 aaPredicted RBP17.94■□□□□ 0.46
CIT-214ENST00000544588 SPG7Q9UQ90 795 aa17.94■□□□□ 0.46
CIT-214ENST00000544588 MYOM1P52179 1685 aa17.93■□□□□ 0.46
CIT-214ENST00000544588 NSD2O96028 1365 aa17.93■□□□□ 0.46
CIT-214ENST00000544588 KCNQ4P56696 695 aa17.92■□□□□ 0.46
CIT-214ENST00000544588 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
CIT-214ENST00000544588 MPRIPQ6WCQ1 1025 aa17.92■□□□□ 0.46
CIT-214ENST00000544588 CYP27B1O15528 508 aa17.91■□□□□ 0.46
CIT-214ENST00000544588 ZBTB7AO95365 584 aa17.91■□□□□ 0.46
CIT-214ENST00000544588 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
CIT-214ENST00000544588 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
CIT-214ENST00000544588 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
CIT-214ENST00000544588 LRRC4BQ9NT99 713 aa17.9■□□□□ 0.46
CIT-214ENST00000544588 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
CIT-214ENST00000544588 CCNL1Q9UK58 526 aaPredicted RBP17.88■□□□□ 0.45
CIT-214ENST00000544588 KIF20BQ96Q89 1820 aa17.88■□□□□ 0.45
CIT-214ENST00000544588 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
CIT-214ENST00000544588 PER1O15534 1290 aaPredicted RBP17.86■□□□□ 0.45
CIT-214ENST00000544588 MTHFSP49914 203 aa17.86■□□□□ 0.45
CIT-214ENST00000544588 ZNF827Q17R98 1081 aa17.86■□□□□ 0.45
CIT-214ENST00000544588 IFNL2Q8IZJ0 200 aa17.86■□□□□ 0.45
CIT-214ENST00000544588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.45
CIT-214ENST00000544588 TFCP2L1Q9NZI6 479 aa17.86■□□□□ 0.45
CIT-214ENST00000544588 PLEKHO1Q53GL0 409 aaPredicted RBP17.85■□□□□ 0.45
CIT-214ENST00000544588 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
CIT-214ENST00000544588 IGSF1Q8N6C5 1336 aa17.84■□□□□ 0.45
CIT-214ENST00000544588 PHKG2P15735 406 aa17.84■□□□□ 0.45
CIT-214ENST00000544588 SULT6B1Q6IMI4 303 aa17.84■□□□□ 0.45
CIT-214ENST00000544588 NKX1-1Q15270 411 aaPredicted RBP17.83■□□□□ 0.44
CIT-214ENST00000544588 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
CIT-214ENST00000544588 PIGBQ92521 554 aa17.83■□□□□ 0.44
CIT-214ENST00000544588 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.44
CIT-214ENST00000544588 NUP188Q5SRE5 1749 aa17.82■□□□□ 0.44
CIT-214ENST00000544588 MSH5O43196 834 aa17.82■□□□□ 0.44
CIT-214ENST00000544588 IL13P35225 146 aa17.82■□□□□ 0.44
CIT-214ENST00000544588 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
CIT-214ENST00000544588 RREB1Q92766 1687 aa17.82■□□□□ 0.44
CIT-214ENST00000544588 NHSQ6T4R5 1651 aa17.81■□□□□ 0.44
CIT-214ENST00000544588 AMOTQ4VCS5 1084 aa17.81■□□□□ 0.44
CIT-214ENST00000544588 ZNF530Q6P9A1 599 aaPredicted RBP17.81■□□□□ 0.44
CIT-214ENST00000544588 AKT1S1Q96B36 256 aa17.81■□□□□ 0.44
CIT-214ENST00000544588 MTFR1LQ9H019 292 aa17.81■□□□□ 0.44
CIT-214ENST00000544588 SBF2Q86WG5 1849 aa17.81■□□□□ 0.44
CIT-214ENST00000544588 PALLDQ8WX93 1383 aa17.8■□□□□ 0.44
CIT-214ENST00000544588 LRP5O75197 1615 aa17.8■□□□□ 0.44
CIT-214ENST00000544588 C1orf141Q5JVX7 400 aa17.8■□□□□ 0.44
CIT-214ENST00000544588 NCAPD2Q15021 1401 aa17.8■□□□□ 0.44
CIT-214ENST00000544588 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
CIT-214ENST00000544588 HMOX1P09601 288 aa17.79■□□□□ 0.44
CIT-214ENST00000544588 RGPD2P0DJD1 1756 aa17.79■□□□□ 0.44
CIT-214ENST00000544588 KAT6BQ8WYB5 2073 aa17.78■□□□□ 0.44
CIT-214ENST00000544588 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
CIT-214ENST00000544588 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
CIT-214ENST00000544588 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.44
CIT-214ENST00000544588 PTGER2P43116 358 aa17.77■□□□□ 0.44
CIT-214ENST00000544588 CABP4P57796 275 aa17.77■□□□□ 0.44
CIT-214ENST00000544588 DCAF5Q96JK2 942 aa17.77■□□□□ 0.44
CIT-214ENST00000544588 ASAP1Q9ULH1 1129 aa17.77■□□□□ 0.44
CIT-214ENST00000544588 U2SURPO15042 1029 aaKnown RBP17.76■□□□□ 0.43
CIT-214ENST00000544588 PNPLA7Q6ZV29 1317 aa17.75■□□□□ 0.43
CIT-214ENST00000544588 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
CIT-214ENST00000544588 KLHL34Q8N239 644 aa17.75■□□□□ 0.43
CIT-214ENST00000544588 SLC16A10Q8TF71 515 aa17.75■□□□□ 0.43
CIT-214ENST00000544588 RGPD3A6NKT7 1758 aaPredicted RBP17.74■□□□□ 0.43
CIT-214ENST00000544588 RGPD4Q7Z3J3 1758 aa17.74■□□□□ 0.43
CIT-214ENST00000544588 LOC102724428A0A0B4J2F2 783 aa17.74■□□□□ 0.43
CIT-214ENST00000544588 POLD1P28340 1107 aa17.74■□□□□ 0.43
CIT-214ENST00000544588 SIK1P57059 783 aa17.74■□□□□ 0.43
CIT-214ENST00000544588 AK7Q96M32 723 aa17.74■□□□□ 0.43
CIT-214ENST00000544588 ARXQ96QS3 562 aa17.74■□□□□ 0.43
CIT-214ENST00000544588 BTAF1O14981 1849 aa17.73■□□□□ 0.43
CIT-214ENST00000544588 ATP6V1AP38606 617 aa17.73■□□□□ 0.43
CIT-214ENST00000544588 COL23A1Q86Y22 540 aaPredicted RBP17.73■□□□□ 0.43
CIT-214ENST00000544588 RBM42Q9BTD8 480 aaKnown RBP17.73■□□□□ 0.43
CIT-214ENST00000544588 ATG3Q9NT62 314 aa17.73■□□□□ 0.43
CIT-214ENST00000544588 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
CIT-214ENST00000544588 NPC1L1Q9UHC9 1359 aa17.72■□□□□ 0.43
CIT-214ENST00000544588 PHF14O94880 888 aa17.71■□□□□ 0.43
CIT-214ENST00000544588 CFAP53Q96M91 514 aa17.71■□□□□ 0.43
CIT-214ENST00000544588 FHDC1Q9C0D6 1143 aaPredicted RBP17.71■□□□□ 0.43
CIT-214ENST00000544588 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
CIT-214ENST00000544588 NFATC2IPQ8NCF5 419 aa17.7■□□□□ 0.42
CIT-214ENST00000544588 FLAD1Q8NFF5 587 aa17.7■□□□□ 0.42
CIT-214ENST00000544588 SYT17Q9BSW7 474 aa17.7■□□□□ 0.42
CIT-214ENST00000544588 DOT1LQ8TEK3 1739 aa17.69■□□□□ 0.42
CIT-214ENST00000544588 PLEKHG2Q9H7P9 1386 aa17.69■□□□□ 0.42
CIT-214ENST00000544588 AKAP4Q5JQC9 854 aa17.69■□□□□ 0.42
CIT-214ENST00000544588 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
CIT-214ENST00000544588 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
CIT-214ENST00000544588 SGIP1Q9BQI5 828 aa17.69■□□□□ 0.42
CIT-214ENST00000544588 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
CIT-214ENST00000544588 KDRP35968 1356 aa17.68■□□□□ 0.42
CIT-214ENST00000544588 ITPK1Q13572 414 aa17.68■□□□□ 0.42
CIT-214ENST00000544588 SHANK3Q9BYB0 1731 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms