RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
SEMA4D-224ENST00000544513 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
SEMA4D-224ENST00000544513 SYT17Q9BSW7 474 aa19.43■□□□□ 0.7
SEMA4D-224ENST00000544513 FHDC1Q9C0D6 1143 aaPredicted RBP19.43■□□□□ 0.7
SEMA4D-224ENST00000544513 NSD2O96028 1365 aa19.43■□□□□ 0.7
SEMA4D-224ENST00000544513 CGNL1Q0VF96 1302 aa19.42■□□□□ 0.7
SEMA4D-224ENST00000544513 CDCA8Q53HL2 280 aa19.41■□□□□ 0.7
SEMA4D-224ENST00000544513 INSRP06213 1382 aa19.4■□□□□ 0.7
SEMA4D-224ENST00000544513 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
SEMA4D-224ENST00000544513 GOLGB1Q14789 3259 aaKnown RBP19.4■□□□□ 0.7
SEMA4D-224ENST00000544513 ARXQ96QS3 562 aa19.39■□□□□ 0.69
SEMA4D-224ENST00000544513 CARD14Q9BXL6 1004 aa19.39■□□□□ 0.69
SEMA4D-224ENST00000544513 KIF24Q5T7B8 1368 aa19.39■□□□□ 0.69
SEMA4D-224ENST00000544513 QSER1Q2KHR3 1735 aa19.39■□□□□ 0.69
SEMA4D-224ENST00000544513 LY75O60449 1722 aa19.38■□□□□ 0.69
SEMA4D-224ENST00000544513 HSP90AB2PQ58FF8 381 aa19.38■□□□□ 0.69
SEMA4D-224ENST00000544513 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
SEMA4D-224ENST00000544513 SLC16A10Q8TF71 515 aa19.38■□□□□ 0.69
SEMA4D-224ENST00000544513 SYTL4Q96C24 671 aaPredicted RBP19.38■□□□□ 0.69
SEMA4D-224ENST00000544513 TIMELESSQ9UNS1 1208 aa19.38■□□□□ 0.69
SEMA4D-224ENST00000544513 SMG6Q86US8 1419 aaKnown RBP19.37■□□□□ 0.69
SEMA4D-224ENST00000544513 PNPLA7Q6ZV29 1317 aa19.37■□□□□ 0.69
SEMA4D-224ENST00000544513 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
SEMA4D-224ENST00000544513 COL24A1Q17RW2 1714 aa19.37■□□□□ 0.69
SEMA4D-224ENST00000544513 FLT4P35916 1363 aa19.36■□□□□ 0.69
SEMA4D-224ENST00000544513 KCNQ4P56696 695 aa19.36■□□□□ 0.69
SEMA4D-224ENST00000544513 USHBP1Q8N6Y0 703 aa19.36■□□□□ 0.69
SEMA4D-224ENST00000544513 RAPGEF4Q8WZA2 1011 aa19.35■□□□□ 0.69
SEMA4D-224ENST00000544513 TUBGCP6Q96RT7 1819 aa19.33■□□□□ 0.69
SEMA4D-224ENST00000544513 TATP17735 454 aaPredicted RBP19.33■□□□□ 0.68
SEMA4D-224ENST00000544513 TFCP2L1Q9NZI6 479 aa19.33■□□□□ 0.68
SEMA4D-224ENST00000544513 NSD3Q9BZ95 1437 aa19.33■□□□□ 0.68
SEMA4D-224ENST00000544513 NCAPD2Q15021 1401 aa19.32■□□□□ 0.68
SEMA4D-224ENST00000544513 PCDH11XQ9BZA7 1347 aa19.31■□□□□ 0.68
SEMA4D-224ENST00000544513 PCDH11YQ9BZA8 1340 aa19.31■□□□□ 0.68
SEMA4D-224ENST00000544513 CLSPNQ9HAW4 1339 aa19.31■□□□□ 0.68
SEMA4D-224ENST00000544513 CCNL1Q9UK58 526 aaPredicted RBP19.31■□□□□ 0.68
SEMA4D-224ENST00000544513 EMILIN1Q9Y6C2 1016 aa19.31■□□□□ 0.68
SEMA4D-224ENST00000544513 CYP27B1O15528 508 aa19.3■□□□□ 0.68
SEMA4D-224ENST00000544513 ANKRD26Q9UPS8 1709 aa19.29■□□□□ 0.68
SEMA4D-224ENST00000544513 POLD1P28340 1107 aa19.28■□□□□ 0.68
SEMA4D-224ENST00000544513 WASHC2AQ641Q2 1341 aa19.27■□□□□ 0.68
SEMA4D-224ENST00000544513 PKD1L3Q7Z443 1732 aa19.26■□□□□ 0.67
SEMA4D-224ENST00000544513 COL23A1Q86Y22 540 aaPredicted RBP19.26■□□□□ 0.67
SEMA4D-224ENST00000544513 ZNF784Q8NCA9 323 aaPredicted RBP19.26■□□□□ 0.67
SEMA4D-224ENST00000544513 CHD4Q14839 1912 aa19.25■□□□□ 0.67
SEMA4D-224ENST00000544513 NKX1-1Q15270 411 aaPredicted RBP19.25■□□□□ 0.67
SEMA4D-224ENST00000544513 PALLDQ8WX93 1383 aa19.24■□□□□ 0.67
SEMA4D-224ENST00000544513 TOGARAM1Q9Y4F4 1720 aa19.24■□□□□ 0.67
SEMA4D-224ENST00000544513 HMGB2P26583 209 aaKnown RBP19.23■□□□□ 0.67
SEMA4D-224ENST00000544513 MPRIPQ6WCQ1 1025 aa19.23■□□□□ 0.67
SEMA4D-224ENST00000544513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.23■□□□□ 0.67
SEMA4D-224ENST00000544513 POLKQ9UBT6 870 aa19.23■□□□□ 0.67
SEMA4D-224ENST00000544513 C5P01031 1676 aa19.23■□□□□ 0.67
SEMA4D-224ENST00000544513 EYA1Q99502 592 aa19.22■□□□□ 0.67
SEMA4D-224ENST00000544513 MAP2P11137 1827 aaKnown RBP19.21■□□□□ 0.67
SEMA4D-224ENST00000544513 ITGB4P16144 1822 aa19.21■□□□□ 0.67
SEMA4D-224ENST00000544513 TAF1LQ8IZX4 1826 aa19.21■□□□□ 0.67
SEMA4D-224ENST00000544513 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
SEMA4D-224ENST00000544513 GPR162Q16538 588 aa19.21■□□□□ 0.67
SEMA4D-224ENST00000544513 NLGN2Q8NFZ4 835 aa19.21■□□□□ 0.67
SEMA4D-224ENST00000544513 PIGBQ92521 554 aa19.21■□□□□ 0.67
SEMA4D-224ENST00000544513 SMARCC1Q92922 1105 aaPredicted RBP19.21■□□□□ 0.67
SEMA4D-224ENST00000544513 SPG7Q9UQ90 795 aa19.2■□□□□ 0.66
SEMA4D-224ENST00000544513 FLAD1Q8NFF5 587 aa19.19■□□□□ 0.66
SEMA4D-224ENST00000544513 MSH5O43196 834 aa19.18■□□□□ 0.66
SEMA4D-224ENST00000544513 KLHL34Q8N239 644 aa19.18■□□□□ 0.66
SEMA4D-224ENST00000544513 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
SEMA4D-224ENST00000544513 PLEKHG2Q9H7P9 1386 aa19.18■□□□□ 0.66
SEMA4D-224ENST00000544513 C4BP0C0L5 1744 aa19.17■□□□□ 0.66
SEMA4D-224ENST00000544513 EIF4A2Q14240 407 aaKnown RBP19.16■□□□□ 0.66
SEMA4D-224ENST00000544513 MSL1Q68DK7 614 aa19.16■□□□□ 0.66
SEMA4D-224ENST00000544513 AMIGO3Q86WK7 504 aa19.16■□□□□ 0.66
SEMA4D-224ENST00000544513 PHKG2P15735 406 aa19.15■□□□□ 0.66
SEMA4D-224ENST00000544513 EIF4G2P78344 907 aaKnown RBP eCLIP19.14■□□□□ 0.65
SEMA4D-224ENST00000544513 IFNL2Q8IZJ0 200 aa19.14■□□□□ 0.65
SEMA4D-224ENST00000544513 LOC102724428A0A0B4J2F2 783 aa19.13■□□□□ 0.65
SEMA4D-224ENST00000544513 HSPA5P11021 654 aaKnown RBP19.13■□□□□ 0.65
SEMA4D-224ENST00000544513 YBX3P16989 372 aaKnown RBP eCLIP19.13■□□□□ 0.65
SEMA4D-224ENST00000544513 TNNT2P45379 298 aaPredicted RBP19.13■□□□□ 0.65
SEMA4D-224ENST00000544513 SIK1P57059 783 aa19.13■□□□□ 0.65
SEMA4D-224ENST00000544513 PANK3Q9H999 370 aa19.13■□□□□ 0.65
SEMA4D-224ENST00000544513 CD2APQ9Y5K6 639 aa19.13■□□□□ 0.65
SEMA4D-224ENST00000544513 UBR3Q6ZT12 1888 aa19.13■□□□□ 0.65
SEMA4D-224ENST00000544513 IGSF1Q8N6C5 1336 aa19.12■□□□□ 0.65
SEMA4D-224ENST00000544513 LINC00116Q8NCU8 138 aa19.12■□□□□ 0.65
SEMA4D-224ENST00000544513 AK7Q96M32 723 aa19.12■□□□□ 0.65
SEMA4D-224ENST00000544513 POLR3GLQ9BT43 218 aa19.12■□□□□ 0.65
SEMA4D-224ENST00000544513 TMOD3Q9NYL9 352 aa19.12■□□□□ 0.65
SEMA4D-224ENST00000544513 ASAP1Q9ULH1 1129 aa19.12■□□□□ 0.65
SEMA4D-224ENST00000544513 GRIN3BO60391 1043 aa19.11■□□□□ 0.65
SEMA4D-224ENST00000544513 PELP1Q8IZL8 1130 aaKnown RBP19.11■□□□□ 0.65
SEMA4D-224ENST00000544513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.1■□□□□ 0.65
SEMA4D-224ENST00000544513 SSFA2P28290 1259 aa19.1■□□□□ 0.65
SEMA4D-224ENST00000544513 ITPK1Q13572 414 aa19.1■□□□□ 0.65
SEMA4D-224ENST00000544513 SMIM5Q71RC9 77 aa19.09■□□□□ 0.65
SEMA4D-224ENST00000544513 ATG3Q9NT62 314 aa19.09■□□□□ 0.65
SEMA4D-224ENST00000544513 ERVV-2B6SEH9 535 aa19.07■□□□□ 0.64
SEMA4D-224ENST00000544513 C1QTNF8P60827 252 aa19.07■□□□□ 0.64
SEMA4D-224ENST00000544513 KDRP35968 1356 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms