RNA–Protein interactions for RNA: ENST00000544377.1

SLC3A2-221, Transcript of solute carrier family 3 member 2, humanhuman

TSL 4

Gene SLC3A2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-221ENST00000544377 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
SLC3A2-221ENST00000544377 BTAF1O14981 1849 aa22.78■■□□□ 1.24
SLC3A2-221ENST00000544377 BCL9O00512 1426 aa22.78■■□□□ 1.24
SLC3A2-221ENST00000544377 KCNQ2O43526 872 aa22.78■■□□□ 1.24
SLC3A2-221ENST00000544377 R3HDM1Q15032 1099 aaKnown RBP22.78■■□□□ 1.24
SLC3A2-221ENST00000544377 TATP17735 454 aaPredicted RBP22.77■■□□□ 1.24
SLC3A2-221ENST00000544377 CNGB1Q14028 1251 aaPredicted RBP22.77■■□□□ 1.24
SLC3A2-221ENST00000544377 ZCRB1Q8TBF4 217 aaKnown RBP22.77■■□□□ 1.24
SLC3A2-221ENST00000544377 WASHC2AQ641Q2 1341 aa22.76■■□□□ 1.23
SLC3A2-221ENST00000544377 NBPF14Q5TI25 921 aa22.74■■□□□ 1.23
SLC3A2-221ENST00000544377 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
SLC3A2-221ENST00000544377 PLSCR1O15162 318 aa22.73■■□□□ 1.23
SLC3A2-221ENST00000544377 CC2D1BQ5T0F9 858 aaKnown RBP22.71■■□□□ 1.23
SLC3A2-221ENST00000544377 EIF4A2Q14240 407 aaKnown RBP22.7■■□□□ 1.22
SLC3A2-221ENST00000544377 EYA1Q99502 592 aa22.7■■□□□ 1.22
SLC3A2-221ENST00000544377 PKD1L3Q7Z443 1732 aa22.69■■□□□ 1.22
SLC3A2-221ENST00000544377 AMER1Q5JTC6 1135 aaPredicted RBP22.69■■□□□ 1.22
SLC3A2-221ENST00000544377 PCDH11XQ9BZA7 1347 aa22.67■■□□□ 1.22
SLC3A2-221ENST00000544377 PCDH11YQ9BZA8 1340 aa22.67■■□□□ 1.22
SLC3A2-221ENST00000544377 TXNRD1Q16881 649 aa22.67■■□□□ 1.22
SLC3A2-221ENST00000544377 PRIM1P49642 420 aaKnown RBP22.66■■□□□ 1.22
SLC3A2-221ENST00000544377 ITGB4P16144 1822 aa22.64■■□□□ 1.22
SLC3A2-221ENST00000544377 PER1O15534 1290 aaPredicted RBP22.64■■□□□ 1.21
SLC3A2-221ENST00000544377 PROM2Q8N271 834 aa22.64■■□□□ 1.21
SLC3A2-221ENST00000544377 SPG7Q9UQ90 795 aa22.63■■□□□ 1.21
SLC3A2-221ENST00000544377 LRP5O75197 1615 aa22.63■■□□□ 1.21
SLC3A2-221ENST00000544377 NCAPD2Q15021 1401 aa22.63■■□□□ 1.21
SLC3A2-221ENST00000544377 ANO8Q9HCE9 1232 aaPredicted RBP22.62■■□□□ 1.21
SLC3A2-221ENST00000544377 TOGARAM1Q9Y4F4 1720 aa22.62■■□□□ 1.21
SLC3A2-221ENST00000544377 CYP27B1O15528 508 aa22.6■■□□□ 1.21
SLC3A2-221ENST00000544377 MTHFSP49914 203 aa22.6■■□□□ 1.21
SLC3A2-221ENST00000544377 STK32BQ9NY57 414 aa22.6■■□□□ 1.21
SLC3A2-221ENST00000544377 IGSF1Q8N6C5 1336 aa22.59■■□□□ 1.21
SLC3A2-221ENST00000544377 LY75O60449 1722 aa22.59■■□□□ 1.21
SLC3A2-221ENST00000544377 MPRIPQ6WCQ1 1025 aa22.56■■□□□ 1.2
SLC3A2-221ENST00000544377 KCNQ4P56696 695 aa22.55■■□□□ 1.2
SLC3A2-221ENST00000544377 AEBP1Q8IUX7 1158 aa22.55■■□□□ 1.2
SLC3A2-221ENST00000544377 CASZ1Q86V15 1759 aa22.54■■□□□ 1.2
SLC3A2-221ENST00000544377 SLC15A2Q16348 729 aa22.54■■□□□ 1.2
SLC3A2-221ENST00000544377 SULT6B1Q6IMI4 303 aa22.54■■□□□ 1.2
SLC3A2-221ENST00000544377 IFNL2Q8IZJ0 200 aa22.54■■□□□ 1.2
SLC3A2-221ENST00000544377 PAPPAQ13219 1627 aa22.53■■□□□ 1.2
SLC3A2-221ENST00000544377 IL13P35225 146 aa22.53■■□□□ 1.2
SLC3A2-221ENST00000544377 LRRC4BQ9NT99 713 aa22.53■■□□□ 1.2
SLC3A2-221ENST00000544377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.53■■□□□ 1.2
SLC3A2-221ENST00000544377 NPC1L1Q9UHC9 1359 aa22.52■■□□□ 1.2
SLC3A2-221ENST00000544377 PHKG2P15735 406 aa22.52■■□□□ 1.2
SLC3A2-221ENST00000544377 PLEKHO1Q53GL0 409 aaPredicted RBP22.52■■□□□ 1.2
SLC3A2-221ENST00000544377 PDGFDQ9GZP0 370 aaPredicted RBP22.51■■□□□ 1.19
SLC3A2-221ENST00000544377 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
SLC3A2-221ENST00000544377 DIAPH1O60610 1272 aaKnown RBP22.5■■□□□ 1.19
SLC3A2-221ENST00000544377 HMOX1P09601 288 aa22.5■■□□□ 1.19
SLC3A2-221ENST00000544377 SLC27A3Q5K4L6 730 aa22.5■■□□□ 1.19
SLC3A2-221ENST00000544377 ZNF530Q6P9A1 599 aaPredicted RBP22.5■■□□□ 1.19
SLC3A2-221ENST00000544377 CCNL1Q9UK58 526 aaPredicted RBP22.5■■□□□ 1.19
SLC3A2-221ENST00000544377 C5P01031 1676 aa22.49■■□□□ 1.19
SLC3A2-221ENST00000544377 VIRMAQ69YN4 1812 aaKnown RBP22.48■■□□□ 1.19
SLC3A2-221ENST00000544377 NKX1-1Q15270 411 aaPredicted RBP22.48■■□□□ 1.19
SLC3A2-221ENST00000544377 ZNF827Q17R98 1081 aa22.48■■□□□ 1.19
SLC3A2-221ENST00000544377 SPON1Q9HCB6 807 aa22.48■■□□□ 1.19
SLC3A2-221ENST00000544377 TMOD3Q9NYL9 352 aa22.48■■□□□ 1.19
SLC3A2-221ENST00000544377 TAF1LQ8IZX4 1826 aa22.47■■□□□ 1.19
SLC3A2-221ENST00000544377 ZBTB7AO95365 584 aa22.47■■□□□ 1.19
SLC3A2-221ENST00000544377 AMOTQ4VCS5 1084 aa22.47■■□□□ 1.19
SLC3A2-221ENST00000544377 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
SLC3A2-221ENST00000544377 PPP1R1BQ9UD71 204 aaPredicted RBP22.47■■□□□ 1.19
SLC3A2-221ENST00000544377 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
SLC3A2-221ENST00000544377 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
SLC3A2-221ENST00000544377 PIGBQ92521 554 aa22.46■■□□□ 1.19
SLC3A2-221ENST00000544377 QSER1Q2KHR3 1735 aa22.45■■□□□ 1.19
SLC3A2-221ENST00000544377 ATF5Q9Y2D1 282 aaPredicted RBP22.45■■□□□ 1.18
SLC3A2-221ENST00000544377 HSP90AB1P08238 724 aaKnown RBP22.44■■□□□ 1.18
SLC3A2-221ENST00000544377 PLEKHG2Q9H7P9 1386 aa22.44■■□□□ 1.18
SLC3A2-221ENST00000544377 KDRP35968 1356 aa22.43■■□□□ 1.18
SLC3A2-221ENST00000544377 SMARCC1Q92922 1105 aaPredicted RBP22.43■■□□□ 1.18
SLC3A2-221ENST00000544377 CFAP53Q96M91 514 aa22.43■■□□□ 1.18
SLC3A2-221ENST00000544377 TFCP2L1Q9NZI6 479 aa22.43■■□□□ 1.18
SLC3A2-221ENST00000544377 COL3A1P02461 1466 aaPredicted RBP22.42■■□□□ 1.18
SLC3A2-221ENST00000544377 AKT1S1Q96B36 256 aa22.42■■□□□ 1.18
SLC3A2-221ENST00000544377 SCN11AQ9UI33 1791 aa22.42■■□□□ 1.18
SLC3A2-221ENST00000544377 MSH5O43196 834 aa22.4■■□□□ 1.18
SLC3A2-221ENST00000544377 DCAF5Q96JK2 942 aa22.4■■□□□ 1.18
SLC3A2-221ENST00000544377 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
SLC3A2-221ENST00000544377 KDM6AO15550 1401 aaPredicted RBP22.4■■□□□ 1.18
SLC3A2-221ENST00000544377 PPP2R1AP30153 589 aa22.39■■□□□ 1.17
SLC3A2-221ENST00000544377 CABP4P57796 275 aa22.39■■□□□ 1.17
SLC3A2-221ENST00000544377 C4BP0C0L5 1744 aa22.38■■□□□ 1.17
SLC3A2-221ENST00000544377 ERVV-2B6SEH9 535 aa22.37■■□□□ 1.17
SLC3A2-221ENST00000544377 MTFR1LQ9H019 292 aa22.37■■□□□ 1.17
SLC3A2-221ENST00000544377 PNPLA7Q6ZV29 1317 aa22.36■■□□□ 1.17
SLC3A2-221ENST00000544377 DDX10Q13206 875 aaKnown RBP22.36■■□□□ 1.17
SLC3A2-221ENST00000544377 ATG3Q9NT62 314 aa22.36■■□□□ 1.17
SLC3A2-221ENST00000544377 LOC102724428A0A0B4J2F2 783 aa22.35■■□□□ 1.17
SLC3A2-221ENST00000544377 SIK1P57059 783 aa22.35■■□□□ 1.17
SLC3A2-221ENST00000544377 AKAP4Q5JQC9 854 aa22.35■■□□□ 1.17
SLC3A2-221ENST00000544377 RBM42Q9BTD8 480 aaKnown RBP22.35■■□□□ 1.17
SLC3A2-221ENST00000544377 ATP6V1AP38606 617 aa22.34■■□□□ 1.17
SLC3A2-221ENST00000544377 MTHFSDQ2M296 383 aaKnown RBP22.34■■□□□ 1.17
SLC3A2-221ENST00000544377 AK7Q96M32 723 aa22.34■■□□□ 1.17
SLC3A2-221ENST00000544377 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms