RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 PRIM1P49642 420 aaKnown RBP38.35■■■■□ 3.73
PDCD2-211ENST00000544336 NBPF6Q5VWK0 638 aa38.35■■■■□ 3.73
PDCD2-211ENST00000544336 NBPF4Q96M43 638 aa38.35■■■■□ 3.73
PDCD2-211ENST00000544336 SMG6Q86US8 1419 aaKnown RBP38.33■■■■□ 3.73
PDCD2-211ENST00000544336 FHDC1Q9C0D6 1143 aaPredicted RBP38.32■■■■□ 3.72
PDCD2-211ENST00000544336 KCNQ4P56696 695 aa38.3■■■■□ 3.72
PDCD2-211ENST00000544336 SGIP1Q9BQI5 828 aa38.3■■■■□ 3.72
PDCD2-211ENST00000544336 SLC27A3Q5K4L6 730 aa38.29■■■■□ 3.72
PDCD2-211ENST00000544336 HSP90AB2PQ58FF8 381 aa38.28■■■■□ 3.72
PDCD2-211ENST00000544336 RAPGEF4Q8WZA2 1011 aa38.27■■■■□ 3.72
PDCD2-211ENST00000544336 AKT1S1Q96B36 256 aa38.27■■■■□ 3.72
PDCD2-211ENST00000544336 SYT17Q9BSW7 474 aa38.27■■■■□ 3.72
PDCD2-211ENST00000544336 NSD2O96028 1365 aa38.27■■■■□ 3.72
PDCD2-211ENST00000544336 LY75O60449 1722 aa38.26■■■■□ 3.72
PDCD2-211ENST00000544336 CARD14Q9BXL6 1004 aa38.25■■■■□ 3.71
PDCD2-211ENST00000544336 NSD3Q9BZ95 1437 aa38.25■■■■□ 3.71
PDCD2-211ENST00000544336 TUBGCP6Q96RT7 1819 aa38.24■■■■□ 3.71
PDCD2-211ENST00000544336 QSER1Q2KHR3 1735 aa38.24■■■■□ 3.71
PDCD2-211ENST00000544336 INSRP06213 1382 aa38.24■■■■□ 3.71
PDCD2-211ENST00000544336 FLT4P35916 1363 aa38.24■■■■□ 3.71
PDCD2-211ENST00000544336 ARXQ96QS3 562 aa38.24■■■■□ 3.71
PDCD2-211ENST00000544336 TATP17735 454 aaPredicted RBP38.22■■■■□ 3.71
PDCD2-211ENST00000544336 PCGF6Q9BYE7 350 aa38.22■■■■□ 3.71
PDCD2-211ENST00000544336 CGNL1Q0VF96 1302 aa38.21■■■■□ 3.71
PDCD2-211ENST00000544336 TFCP2L1Q9NZI6 479 aa38.19■■■■□ 3.7
PDCD2-211ENST00000544336 EMILIN1Q9Y6C2 1016 aa38.19■■■■□ 3.7
PDCD2-211ENST00000544336 PNPLA7Q6ZV29 1317 aa38.18■■■■□ 3.7
PDCD2-211ENST00000544336 CCNL1Q9UK58 526 aaPredicted RBP38.17■■■■□ 3.7
PDCD2-211ENST00000544336 TIMELESSQ9UNS1 1208 aa38.16■■■■□ 3.7
PDCD2-211ENST00000544336 KIF24Q5T7B8 1368 aa38.16■■■■□ 3.7
PDCD2-211ENST00000544336 PPM1GO15355 546 aaPredicted RBP38.14■■■■□ 3.7
PDCD2-211ENST00000544336 POLR3GLQ9BT43 218 aa38.14■■■■□ 3.7
PDCD2-211ENST00000544336 PCDH11XQ9BZA7 1347 aa38.13■■■■□ 3.7
PDCD2-211ENST00000544336 PCDH11YQ9BZA8 1340 aa38.13■■■■□ 3.7
PDCD2-211ENST00000544336 KLHL34Q8N239 644 aa38.12■■■■□ 3.69
PDCD2-211ENST00000544336 SLC16A10Q8TF71 515 aa38.12■■■■□ 3.69
PDCD2-211ENST00000544336 POLD1P28340 1107 aa38.09■■■■□ 3.69
PDCD2-211ENST00000544336 MAP2P11137 1827 aaKnown RBP38.08■■■■□ 3.69
PDCD2-211ENST00000544336 ANKRD26Q9UPS8 1709 aa38.08■■■■□ 3.69
PDCD2-211ENST00000544336 COL24A1Q17RW2 1714 aa38.07■■■■□ 3.69
PDCD2-211ENST00000544336 MAP3K5Q99683 1374 aa38.06■■■■□ 3.68
PDCD2-211ENST00000544336 TOGARAM1Q9Y4F4 1720 aa38.06■■■■□ 3.68
PDCD2-211ENST00000544336 CLSPNQ9HAW4 1339 aa38.06■■■■□ 3.68
PDCD2-211ENST00000544336 PKD1L3Q7Z443 1732 aa38.05■■■■□ 3.68
PDCD2-211ENST00000544336 CYP27B1O15528 508 aa38.05■■■■□ 3.68
PDCD2-211ENST00000544336 MSH5O43196 834 aa38.05■■■■□ 3.68
PDCD2-211ENST00000544336 C5P01031 1676 aa38.04■■■■□ 3.68
PDCD2-211ENST00000544336 MPRIPQ6WCQ1 1025 aa38.04■■■■□ 3.68
PDCD2-211ENST00000544336 ITGB4P16144 1822 aa38.03■■■■□ 3.68
PDCD2-211ENST00000544336 CHD4Q14839 1912 aa38■■■■□ 3.67
PDCD2-211ENST00000544336 PALLDQ8WX93 1383 aa38■■■■□ 3.67
PDCD2-211ENST00000544336 COL23A1Q86Y22 540 aaPredicted RBP37.99■■■■□ 3.67
PDCD2-211ENST00000544336 TAF1LQ8IZX4 1826 aa37.98■■■■□ 3.67
PDCD2-211ENST00000544336 WASHC2AQ641Q2 1341 aa37.98■■■■□ 3.67
PDCD2-211ENST00000544336 NCAPD2Q15021 1401 aa37.97■■■■□ 3.67
PDCD2-211ENST00000544336 TNNT2P45379 298 aaPredicted RBP37.97■■■■□ 3.67
PDCD2-211ENST00000544336 GPR162Q16538 588 aa37.97■■■■□ 3.67
PDCD2-211ENST00000544336 UTRNP46939 3433 aa37.97■■■■□ 3.67
PDCD2-211ENST00000544336 EYA1Q99502 592 aa37.95■■■■□ 3.67
PDCD2-211ENST00000544336 POLKQ9UBT6 870 aa37.95■■■■□ 3.67
PDCD2-211ENST00000544336 PELP1Q8IZL8 1130 aaKnown RBP37.94■■■■□ 3.66
PDCD2-211ENST00000544336 SPG7Q9UQ90 795 aa37.94■■■■□ 3.66
PDCD2-211ENST00000544336 MSL1Q68DK7 614 aa37.93■■■■□ 3.66
PDCD2-211ENST00000544336 ZNF784Q8NCA9 323 aaPredicted RBP37.92■■■■□ 3.66
PDCD2-211ENST00000544336 NLGN2Q8NFZ4 835 aa37.91■■■■□ 3.66
PDCD2-211ENST00000544336 HSPA5P11021 654 aaKnown RBP37.9■■■■□ 3.66
PDCD2-211ENST00000544336 EIF4G2P78344 907 aaKnown RBP eCLIP37.9■■■■□ 3.66
PDCD2-211ENST00000544336 PIGBQ92521 554 aa37.89■■■■□ 3.66
PDCD2-211ENST00000544336 SMARCC1Q92922 1105 aaPredicted RBP37.89■■■■□ 3.66
PDCD2-211ENST00000544336 C4BP0C0L5 1744 aa37.88■■■■□ 3.65
PDCD2-211ENST00000544336 NKX1-1Q15270 411 aaPredicted RBP37.87■■■■□ 3.65
PDCD2-211ENST00000544336 EIF4A2Q14240 407 aaKnown RBP37.85■■■■□ 3.65
PDCD2-211ENST00000544336 AK7Q96M32 723 aa37.83■■■■□ 3.65
PDCD2-211ENST00000544336 PANK3Q9H999 370 aa37.83■■■■□ 3.65
PDCD2-211ENST00000544336 HMGB2P26583 209 aaKnown RBP37.82■■■■□ 3.64
PDCD2-211ENST00000544336 FLAD1Q8NFF5 587 aa37.81■■■■□ 3.64
PDCD2-211ENST00000544336 CCER1Q8TC90 406 aaPredicted RBP37.81■■■■□ 3.64
PDCD2-211ENST00000544336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.81■■■■□ 3.64
PDCD2-211ENST00000544336 TMOD3Q9NYL9 352 aa37.81■■■■□ 3.64
PDCD2-211ENST00000544336 IFNL2Q8IZJ0 200 aa37.8■■■■□ 3.64
PDCD2-211ENST00000544336 UBR3Q6ZT12 1888 aa37.79■■■■□ 3.64
PDCD2-211ENST00000544336 PHF14O94880 888 aa37.79■■■■□ 3.64
PDCD2-211ENST00000544336 PHKG2P15735 406 aa37.79■■■■□ 3.64
PDCD2-211ENST00000544336 SMIM5Q71RC9 77 aa37.79■■■■□ 3.64
PDCD2-211ENST00000544336 AMIGO3Q86WK7 504 aa37.78■■■■□ 3.64
PDCD2-211ENST00000544336 ASAP1Q9ULH1 1129 aa37.76■■■■□ 3.64
PDCD2-211ENST00000544336 LOC102724428A0A0B4J2F2 783 aa37.75■■■■□ 3.63
PDCD2-211ENST00000544336 SIK1P57059 783 aa37.75■■■■□ 3.63
PDCD2-211ENST00000544336 LINC00116Q8NCU8 138 aa37.73■■■■□ 3.63
PDCD2-211ENST00000544336 GOLGB1Q14789 3259 aaKnown RBP37.72■■■■□ 3.63
PDCD2-211ENST00000544336 IGSF1Q8N6C5 1336 aa37.71■■■■□ 3.63
PDCD2-211ENST00000544336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.71■■■■□ 3.63
PDCD2-211ENST00000544336 YBX3P16989 372 aaKnown RBP eCLIP37.71■■■■□ 3.63
PDCD2-211ENST00000544336 ATP6V1AP38606 617 aa37.68■■■■□ 3.62
PDCD2-211ENST00000544336 ITPK1Q13572 414 aa37.68■■■■□ 3.62
PDCD2-211ENST00000544336 MORC1Q86VD1 984 aa37.68■■■■□ 3.62
PDCD2-211ENST00000544336 ATG3Q9NT62 314 aa37.67■■■■□ 3.62
PDCD2-211ENST00000544336 CD2APQ9Y5K6 639 aa37.65■■■■□ 3.62
PDCD2-211ENST00000544336 GNPATO15228 680 aa37.64■■■■□ 3.62
PDCD2-211ENST00000544336 SSFA2P28290 1259 aa37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms