RNA–Protein interactions for RNA: ENST00000543756.5

DDX11-226, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-226ENST00000543756 BRWD3Q6RI45 1802 aa23.11■■□□□ 1.29
DDX11-226ENST00000543756 U2SURPO15042 1029 aaKnown RBP23.11■■□□□ 1.29
DDX11-226ENST00000543756 AEBP1Q8IUX7 1158 aa23.11■■□□□ 1.29
DDX11-226ENST00000543756 ZCRB1Q8TBF4 217 aaKnown RBP23.11■■□□□ 1.29
DDX11-226ENST00000543756 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
DDX11-226ENST00000543756 FCHSD2O94868 740 aa23.09■■□□□ 1.29
DDX11-226ENST00000543756 AMOTQ4VCS5 1084 aa23.09■■□□□ 1.29
DDX11-226ENST00000543756 SPG7Q9UQ90 795 aa23.09■■□□□ 1.29
DDX11-226ENST00000543756 EP400Q96L91 3159 aa23.09■■□□□ 1.29
DDX11-226ENST00000543756 PCDH11XQ9BZA7 1347 aa23.08■■□□□ 1.29
DDX11-226ENST00000543756 PCDH11YQ9BZA8 1340 aa23.08■■□□□ 1.29
DDX11-226ENST00000543756 DIEXFQ68CQ4 756 aaKnown RBP23.08■■□□□ 1.29
DDX11-226ENST00000543756 HMOX1P09601 288 aa23.07■■□□□ 1.28
DDX11-226ENST00000543756 U2AF1L5P0DN76 240 aaPredicted RBP23.07■■□□□ 1.28
DDX11-226ENST00000543756 U2AF1Q01081 240 aaKnown RBP eCLIP23.07■■□□□ 1.28
DDX11-226ENST00000543756 MARCH10Q8NA82 808 aaPredicted RBP23.07■■□□□ 1.28
DDX11-226ENST00000543756 RSPH6AQ9H0K4 717 aa23.07■■□□□ 1.28
DDX11-226ENST00000543756 PLEKHO1Q53GL0 409 aaPredicted RBP23.06■■□□□ 1.28
DDX11-226ENST00000543756 FAM196AQ6ZSG2 479 aa23.06■■□□□ 1.28
DDX11-226ENST00000543756 SHANK3Q9BYB0 1731 aa23.05■■□□□ 1.28
DDX11-226ENST00000543756 PNNQ9H307 717 aaKnown RBP23.03■■□□□ 1.28
DDX11-226ENST00000543756 CYP27B1O15528 508 aa23.01■■□□□ 1.27
DDX11-226ENST00000543756 PRKAR2BP31323 418 aa23.01■■□□□ 1.27
DDX11-226ENST00000543756 WDR43Q15061 677 aaKnown RBP eCLIP23.01■■□□□ 1.27
DDX11-226ENST00000543756 NKX1-1Q15270 411 aaPredicted RBP23.01■■□□□ 1.27
DDX11-226ENST00000543756 IFNL2Q8IZJ0 200 aa23■■□□□ 1.27
DDX11-226ENST00000543756 DDX54Q8TDD1 881 aaKnown RBP23■■□□□ 1.27
DDX11-226ENST00000543756 PHKG2P15735 406 aa22.99■■□□□ 1.27
DDX11-226ENST00000543756 MRS2Q9HD23 443 aa22.99■■□□□ 1.27
DDX11-226ENST00000543756 CCER2I3L3R5 266 aa22.98■■□□□ 1.27
DDX11-226ENST00000543756 CCDC184Q52MB2 194 aa22.98■■□□□ 1.27
DDX11-226ENST00000543756 CCDC125Q86Z20 511 aa22.98■■□□□ 1.27
DDX11-226ENST00000543756 PLEKHF1Q96S99 279 aa22.98■■□□□ 1.27
DDX11-226ENST00000543756 HSP90AB1P08238 724 aaKnown RBP22.97■■□□□ 1.27
DDX11-226ENST00000543756 FAM182BQ5T319 152 aa22.97■■□□□ 1.27
DDX11-226ENST00000543756 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
DDX11-226ENST00000543756 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
DDX11-226ENST00000543756 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
DDX11-226ENST00000543756 NEFMP07197 916 aa22.95■■□□□ 1.26
DDX11-226ENST00000543756 MTHFSDQ2M296 383 aaKnown RBP22.95■■□□□ 1.26
DDX11-226ENST00000543756 AKAP4Q5JQC9 854 aa22.95■■□□□ 1.26
DDX11-226ENST00000543756 C1orf141Q5JVX7 400 aa22.95■■□□□ 1.26
DDX11-226ENST00000543756 PHACTR3Q96KR7 559 aa22.95■■□□□ 1.26
DDX11-226ENST00000543756 ADAMTS8Q9UP79 889 aa22.95■■□□□ 1.26
DDX11-226ENST00000543756 DCAF5Q96JK2 942 aa22.93■■□□□ 1.26
DDX11-226ENST00000543756 BCL11BQ9C0K0 894 aaPredicted RBP22.93■■□□□ 1.26
DDX11-226ENST00000543756 UPF1Q92900 1129 aaKnown RBP eCLIP22.92■■□□□ 1.26
DDX11-226ENST00000543756 NHSQ6T4R5 1651 aa22.92■■□□□ 1.26
DDX11-226ENST00000543756 SOCS7O14512 581 aa22.91■■□□□ 1.26
DDX11-226ENST00000543756 MAPK8IP3Q9UPT6 1336 aa22.9■■□□□ 1.26
DDX11-226ENST00000543756 RUNDC1Q96C34 613 aa22.9■■□□□ 1.26
DDX11-226ENST00000543756 MAP3K5Q99683 1374 aa22.89■■□□□ 1.26
DDX11-226ENST00000543756 SBF2Q86WG5 1849 aa22.89■■□□□ 1.26
DDX11-226ENST00000543756 ERVV-2B6SEH9 535 aa22.89■■□□□ 1.25
DDX11-226ENST00000543756 ADAMTS7Q9UKP4 1686 aa22.89■■□□□ 1.25
DDX11-226ENST00000543756 KDM6AO15550 1401 aaPredicted RBP22.89■■□□□ 1.25
DDX11-226ENST00000543756 GNAT3A8MTJ3 354 aa22.88■■□□□ 1.25
DDX11-226ENST00000543756 HTATSF1O43719 755 aaKnown RBP22.88■■□□□ 1.25
DDX11-226ENST00000543756 TRIM37O94972 964 aa22.88■■□□□ 1.25
DDX11-226ENST00000543756 DOT1LQ8TEK3 1739 aa22.87■■□□□ 1.25
DDX11-226ENST00000543756 TNS1Q9HBL0 1735 aaKnown RBP22.87■■□□□ 1.25
DDX11-226ENST00000543756 TOGARAM1Q9Y4F4 1720 aa22.86■■□□□ 1.25
DDX11-226ENST00000543756 NFE2L2Q16236 605 aa22.86■■□□□ 1.25
DDX11-226ENST00000543756 MRC1P22897 1456 aa22.85■■□□□ 1.25
DDX11-226ENST00000543756 PRIM1P49642 420 aaKnown RBP22.85■■□□□ 1.25
DDX11-226ENST00000543756 SF3B2Q13435 895 aaKnown RBP22.85■■□□□ 1.25
DDX11-226ENST00000543756 MIER1Q8N108 512 aa22.85■■□□□ 1.25
DDX11-226ENST00000543756 ACSBG1Q96GR2 724 aa22.85■■□□□ 1.25
DDX11-226ENST00000543756 KCNQ2O43526 872 aa22.84■■□□□ 1.25
DDX11-226ENST00000543756 MPRIPQ6WCQ1 1025 aa22.84■■□□□ 1.25
DDX11-226ENST00000543756 CEMIPQ8WUJ3 1361 aa22.84■■□□□ 1.25
DDX11-226ENST00000543756 RNMTO43148 476 aaKnown RBP22.83■■□□□ 1.25
DDX11-226ENST00000543756 PLSCR1O15162 318 aa22.82■■□□□ 1.24
DDX11-226ENST00000543756 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
DDX11-226ENST00000543756 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
DDX11-226ENST00000543756 SCN11AQ9UI33 1791 aa22.81■■□□□ 1.24
DDX11-226ENST00000543756 TMPOP42166 694 aaKnown RBP22.81■■□□□ 1.24
DDX11-226ENST00000543756 BAG6P46379 1132 aa22.81■■□□□ 1.24
DDX11-226ENST00000543756 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
DDX11-226ENST00000543756 CCDC146Q8IYE0 955 aa22.81■■□□□ 1.24
DDX11-226ENST00000543756 TMOD3Q9NYL9 352 aa22.81■■□□□ 1.24
DDX11-226ENST00000543756 APBA3O96018 575 aa22.8■■□□□ 1.24
DDX11-226ENST00000543756 LMOD3Q0VAK6 560 aa22.8■■□□□ 1.24
DDX11-226ENST00000543756 PTF1AQ7RTS3 328 aa22.8■■□□□ 1.24
DDX11-226ENST00000543756 RTF1Q92541 710 aaKnown RBP22.8■■□□□ 1.24
DDX11-226ENST00000543756 SYTL4Q96C24 671 aaPredicted RBP22.8■■□□□ 1.24
DDX11-226ENST00000543756 SLC52A2Q9HAB3 445 aa22.8■■□□□ 1.24
DDX11-226ENST00000543756 LGR6Q9HBX8 967 aa22.8■■□□□ 1.24
DDX11-226ENST00000543756 CABP4P57796 275 aa22.79■■□□□ 1.24
DDX11-226ENST00000543756 IL17REQ8NFR9 667 aa22.79■■□□□ 1.24
DDX11-226ENST00000543756 PIGBQ92521 554 aa22.79■■□□□ 1.24
DDX11-226ENST00000543756 BTAF1O14981 1849 aa22.78■■□□□ 1.24
DDX11-226ENST00000543756 RIPK4P57078 832 aa22.77■■□□□ 1.24
DDX11-226ENST00000543756 FAM9BQ8IZU0 186 aa22.77■■□□□ 1.24
DDX11-226ENST00000543756 ITGB4P16144 1822 aa22.77■■□□□ 1.24
DDX11-226ENST00000543756 SMARCC1Q92922 1105 aaPredicted RBP22.76■■□□□ 1.23
DDX11-226ENST00000543756 APAF1O14727 1248 aa22.75■■□□□ 1.23
DDX11-226ENST00000543756 NFATC2IPQ8NCF5 419 aa22.75■■□□□ 1.23
DDX11-226ENST00000543756 CAMKK2Q96RR4 588 aa22.75■■□□□ 1.23
DDX11-226ENST00000543756 TEFQ10587 303 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms