RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 CCDC85CA6NKD9 419 aa12.85□□□□□ -0.35
CD4-211ENST00000543755 SOX12O15370 315 aa12.85□□□□□ -0.35
CD4-211ENST00000543755 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
CD4-211ENST00000543755 MPHOSPH9Q99550 1183 aa12.85□□□□□ -0.35
CD4-211ENST00000543755 BCS1LQ9Y276 419 aa12.85□□□□□ -0.35
CD4-211ENST00000543755 KCPQ6ZWJ8 1503 aa12.84□□□□□ -0.35
CD4-211ENST00000543755 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
CD4-211ENST00000543755 NLRP2Q9NX02 1062 aa12.84□□□□□ -0.35
CD4-211ENST00000543755 COL18A1P39060 1754 aa12.84□□□□□ -0.35
CD4-211ENST00000543755 C9orf131Q5VYM1 1079 aa12.83□□□□□ -0.36
CD4-211ENST00000543755 AIDAQ96BJ3 306 aa12.83□□□□□ -0.36
CD4-211ENST00000543755 CTCFP49711 727 aaPredicted RBP12.82□□□□□ -0.36
CD4-211ENST00000543755 DDX54Q8TDD1 881 aaKnown RBP12.82□□□□□ -0.36
CD4-211ENST00000543755 MKRN1Q9UHC7 482 aaKnown RBP12.82□□□□□ -0.36
CD4-211ENST00000543755 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
CD4-211ENST00000543755 PIK3C2AO00443 1686 aa12.81□□□□□ -0.36
CD4-211ENST00000543755 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
CD4-211ENST00000543755 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
CD4-211ENST00000543755 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
CD4-211ENST00000543755 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
CD4-211ENST00000543755 LBX1P52954 281 aa12.79□□□□□ -0.36
CD4-211ENST00000543755 USP47Q96K76 1375 aa12.79□□□□□ -0.36
CD4-211ENST00000543755 RGPD5Q99666 1765 aa12.79□□□□□ -0.36
CD4-211ENST00000543755 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
CD4-211ENST00000543755 FCHSD2O94868 740 aa12.77□□□□□ -0.37
CD4-211ENST00000543755 RGS19P49795 217 aa12.77□□□□□ -0.37
CD4-211ENST00000543755 PPARGC1BQ86YN6 1023 aaKnown RBP12.77□□□□□ -0.37
CD4-211ENST00000543755 DCAF11Q8TEB1 546 aa12.77□□□□□ -0.37
CD4-211ENST00000543755 STAC3Q96MF2 364 aa12.77□□□□□ -0.37
CD4-211ENST00000543755 RNF181Q9P0P0 153 aa12.77□□□□□ -0.37
CD4-211ENST00000543755 ANKRD36BQ8N2N9 1353 aa12.77□□□□□ -0.37
CD4-211ENST00000543755 PHF14O94880 888 aa12.76□□□□□ -0.37
CD4-211ENST00000543755 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
CD4-211ENST00000543755 CABP1Q9NZU7 370 aa12.76□□□□□ -0.37
CD4-211ENST00000543755 ERBB3P21860 1342 aa12.76□□□□□ -0.37
CD4-211ENST00000543755 A0A0G2JLW4 131 aa12.75□□□□□ -0.37
CD4-211ENST00000543755 PXDNLA1KZ92 1463 aa12.75□□□□□ -0.37
CD4-211ENST00000543755 CABP2Q9NPB3 220 aa12.75□□□□□ -0.37
CD4-211ENST00000543755 LY75O60449 1722 aa12.74□□□□□ -0.37
CD4-211ENST00000543755 AK7Q96M32 723 aa12.74□□□□□ -0.37
CD4-211ENST00000543755 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
CD4-211ENST00000543755 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
CD4-211ENST00000543755 TGFB2P61812 414 aa12.72□□□□□ -0.37
CD4-211ENST00000543755 ANKRD24Q8TF21 1146 aa12.72□□□□□ -0.37
CD4-211ENST00000543755 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
CD4-211ENST00000543755 QRICH2Q9H0J4 1663 aa12.71□□□□□ -0.37
CD4-211ENST00000543755 TTC21AQ8NDW8 1320 aa12.71□□□□□ -0.37
CD4-211ENST00000543755 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
CD4-211ENST00000543755 NSD2O96028 1365 aa12.7□□□□□ -0.38
CD4-211ENST00000543755 TTC21BQ7Z4L5 1316 aa12.7□□□□□ -0.38
CD4-211ENST00000543755 VEGFAP15692 232 aaPredicted RBP12.7□□□□□ -0.38
CD4-211ENST00000543755 PKD1L3Q7Z443 1732 aa12.7□□□□□ -0.38
CD4-211ENST00000543755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
CD4-211ENST00000543755 HSPA8P11142 646 aaKnown RBP12.69□□□□□ -0.38
CD4-211ENST00000543755 DPEP1P16444 411 aa12.69□□□□□ -0.38
CD4-211ENST00000543755 CNTNAP1P78357 1384 aa12.69□□□□□ -0.38
CD4-211ENST00000543755 DOT1LQ8TEK3 1739 aa12.68□□□□□ -0.38
CD4-211ENST00000543755 C5P01031 1676 aa12.68□□□□□ -0.38
CD4-211ENST00000543755 MMP10P09238 476 aa12.68□□□□□ -0.38
CD4-211ENST00000543755 AMIGO3Q86WK7 504 aa12.68□□□□□ -0.38
CD4-211ENST00000543755 NFAT5O94916 1531 aa12.67□□□□□ -0.38
CD4-211ENST00000543755 SSFA2P28290 1259 aa12.67□□□□□ -0.38
CD4-211ENST00000543755 WBP1LQ9NX94 342 aa12.67□□□□□ -0.38
CD4-211ENST00000543755 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
CD4-211ENST00000543755 VEGFBP49765 207 aa12.66□□□□□ -0.38
CD4-211ENST00000543755 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
CD4-211ENST00000543755 USP54Q70EL1 1684 aa12.66□□□□□ -0.38
CD4-211ENST00000543755 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
CD4-211ENST00000543755 PALLDQ8WX93 1383 aa12.65□□□□□ -0.38
CD4-211ENST00000543755 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
CD4-211ENST00000543755 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
CD4-211ENST00000543755 TNRC18O15417 2968 aaPredicted RBP12.63□□□□□ -0.39
CD4-211ENST00000543755 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
CD4-211ENST00000543755 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
CD4-211ENST00000543755 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
CD4-211ENST00000543755 EVC2Q86UK5 1308 aa12.62□□□□□ -0.39
CD4-211ENST00000543755 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
CD4-211ENST00000543755 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
CD4-211ENST00000543755 KTN1Q86UP2 1357 aaKnown RBP12.62□□□□□ -0.39
CD4-211ENST00000543755 DALRD3Q5D0E6 543 aaKnown RBP12.62□□□□□ -0.39
CD4-211ENST00000543755 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
CD4-211ENST00000543755 RASSF7Q02833 373 aa12.61□□□□□ -0.39
CD4-211ENST00000543755 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
CD4-211ENST00000543755 MPRIPQ6WCQ1 1025 aa12.61□□□□□ -0.39
CD4-211ENST00000543755 NLGN1Q8N2Q7 840 aa12.61□□□□□ -0.39
CD4-211ENST00000543755 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
CD4-211ENST00000543755 PRPF38BQ5VTL8 546 aaKnown RBP12.6□□□□□ -0.39
CD4-211ENST00000543755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
CD4-211ENST00000543755 GNPATO15228 680 aa12.59□□□□□ -0.39
CD4-211ENST00000543755 PARP3Q9Y6F1 533 aa12.59□□□□□ -0.39
CD4-211ENST00000543755 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
CD4-211ENST00000543755 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
CD4-211ENST00000543755 LTN1O94822 1766 aa12.58□□□□□ -0.39
CD4-211ENST00000543755 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.4
CD4-211ENST00000543755 KCNA3P22001 575 aa12.58□□□□□ -0.4
CD4-211ENST00000543755 TMF1P82094 1093 aa12.58□□□□□ -0.4
CD4-211ENST00000543755 MAP2K1Q02750 393 aaPredicted RBP12.58□□□□□ -0.4
CD4-211ENST00000543755 CGNL1Q0VF96 1302 aa12.58□□□□□ -0.4
CD4-211ENST00000543755 FAM208AQ9UK61 1670 aaKnown RBP12.57□□□□□ -0.4
CD4-211ENST00000543755 USP31Q70CQ4 1352 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms