RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 CARD10Q9BWT7 1032 aa19.56■□□□□ 0.72
TMEM258-207ENST00000543510 RCAN3Q9UKA8 241 aa19.56■□□□□ 0.72
TMEM258-207ENST00000543510 IRX6P78412 446 aaPredicted RBP19.54■□□□□ 0.72
TMEM258-207ENST00000543510 NCAPD2Q15021 1401 aa19.54■□□□□ 0.72
TMEM258-207ENST00000543510 CCDC27Q2M243 656 aa19.54■□□□□ 0.72
TMEM258-207ENST00000543510 PLEKHO1Q53GL0 409 aaPredicted RBP19.54■□□□□ 0.72
TMEM258-207ENST00000543510 WWC1Q8IX03 1113 aa19.54■□□□□ 0.72
TMEM258-207ENST00000543510 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
TMEM258-207ENST00000543510 SLIT2O94813 1529 aa19.54■□□□□ 0.72
TMEM258-207ENST00000543510 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
TMEM258-207ENST00000543510 TRMT2AQ8IZ69 625 aaKnown RBP19.53■□□□□ 0.72
TMEM258-207ENST00000543510 MEGF6O75095 1541 aa19.53■□□□□ 0.72
TMEM258-207ENST00000543510 E9PSI1 815 aa19.52■□□□□ 0.72
TMEM258-207ENST00000543510 UNC5CLQ8IV45 518 aa19.52■□□□□ 0.72
TMEM258-207ENST00000543510 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
TMEM258-207ENST00000543510 USP21Q9UK80 565 aa19.52■□□□□ 0.72
TMEM258-207ENST00000543510 PARP4Q9UKK3 1724 aaKnown RBP19.52■□□□□ 0.72
TMEM258-207ENST00000543510 ZNF530Q6P9A1 599 aaPredicted RBP19.52■□□□□ 0.71
TMEM258-207ENST00000543510 TRIM35Q9UPQ4 493 aa19.52■□□□□ 0.71
TMEM258-207ENST00000543510 DCTN1Q14203 1278 aa19.51■□□□□ 0.71
TMEM258-207ENST00000543510 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
TMEM258-207ENST00000543510 THUMPD2Q9BTF0 503 aaKnown RBP19.51■□□□□ 0.71
TMEM258-207ENST00000543510 AFF2P51816 1311 aa19.51■□□□□ 0.71
TMEM258-207ENST00000543510 IL2RBP14784 551 aa19.5■□□□□ 0.71
TMEM258-207ENST00000543510 LMOD3Q0VAK6 560 aa19.5■□□□□ 0.71
TMEM258-207ENST00000543510 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
TMEM258-207ENST00000543510 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
TMEM258-207ENST00000543510 C1orf141Q5JVX7 400 aa19.49■□□□□ 0.71
TMEM258-207ENST00000543510 MCM10Q7L590 875 aa19.49■□□□□ 0.71
TMEM258-207ENST00000543510 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
TMEM258-207ENST00000543510 SPG7Q9UQ90 795 aa19.49■□□□□ 0.71
TMEM258-207ENST00000543510 LAS1LQ9Y4W2 734 aaKnown RBP19.49■□□□□ 0.71
TMEM258-207ENST00000543510 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
TMEM258-207ENST00000543510 GNAT3A8MTJ3 354 aa19.48■□□□□ 0.71
TMEM258-207ENST00000543510 FNBP4Q8N3X1 1017 aaPredicted RBP19.48■□□□□ 0.71
TMEM258-207ENST00000543510 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
TMEM258-207ENST00000543510 WNK3Q9BYP7 1800 aa19.47■□□□□ 0.71
TMEM258-207ENST00000543510 SPATA31A1Q5TZJ5 1347 aa19.47■□□□□ 0.71
TMEM258-207ENST00000543510 MAP3K5Q99683 1374 aa19.47■□□□□ 0.71
TMEM258-207ENST00000543510 RRP1P56182 461 aaKnown RBP19.46■□□□□ 0.71
TMEM258-207ENST00000543510 PKD1L3Q7Z443 1732 aa19.46■□□□□ 0.71
TMEM258-207ENST00000543510 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.46■□□□□ 0.71
TMEM258-207ENST00000543510 SPATA31A5Q5VU36 1347 aa19.45■□□□□ 0.7
TMEM258-207ENST00000543510 SPATA31A7Q8IWB4 1347 aa19.45■□□□□ 0.7
TMEM258-207ENST00000543510 OVOS2A0A0G2JMS6 1433 aa19.45■□□□□ 0.7
TMEM258-207ENST00000543510 A0A0G2JS52 829 aa19.45■□□□□ 0.7
TMEM258-207ENST00000543510 MYT1Q01538 1121 aa19.45■□□□□ 0.7
TMEM258-207ENST00000543510 ZCRB1Q8TBF4 217 aaKnown RBP19.45■□□□□ 0.7
TMEM258-207ENST00000543510 VPS72Q15906 364 aa19.44■□□□□ 0.7
TMEM258-207ENST00000543510 AKAP4Q5JQC9 854 aa19.44■□□□□ 0.7
TMEM258-207ENST00000543510 DDX54Q8TDD1 881 aaKnown RBP19.44■□□□□ 0.7
TMEM258-207ENST00000543510 MPRIPQ6WCQ1 1025 aa19.43■□□□□ 0.7
TMEM258-207ENST00000543510 FAM98CQ17RN3 349 aaKnown RBP19.43■□□□□ 0.7
TMEM258-207ENST00000543510 PPP4R2Q9NY27 417 aa19.43■□□□□ 0.7
TMEM258-207ENST00000543510 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
TMEM258-207ENST00000543510 IFNL2Q8IZJ0 200 aa19.42■□□□□ 0.7
TMEM258-207ENST00000543510 THRAP3Q9Y2W1 955 aaKnown RBP19.42■□□□□ 0.7
TMEM258-207ENST00000543510 PHKG2P15735 406 aa19.41■□□□□ 0.7
TMEM258-207ENST00000543510 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
TMEM258-207ENST00000543510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.41■□□□□ 0.7
TMEM258-207ENST00000543510 PCDH11XQ9BZA7 1347 aa19.4■□□□□ 0.7
TMEM258-207ENST00000543510 PCDH11YQ9BZA8 1340 aa19.4■□□□□ 0.7
TMEM258-207ENST00000543510 HTATSF1O43719 755 aaKnown RBP19.4■□□□□ 0.7
TMEM258-207ENST00000543510 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
TMEM258-207ENST00000543510 KAT6BQ8WYB5 2073 aa19.4■□□□□ 0.7
TMEM258-207ENST00000543510 EXOC5O00471 708 aa19.4■□□□□ 0.7
TMEM258-207ENST00000543510 CYP27B1O15528 508 aa19.4■□□□□ 0.7
TMEM258-207ENST00000543510 IL17REQ8NFR9 667 aa19.4■□□□□ 0.7
TMEM258-207ENST00000543510 TSR2Q969E8 191 aaKnown RBP19.4■□□□□ 0.7
TMEM258-207ENST00000543510 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
TMEM258-207ENST00000543510 TRPC5Q9UL62 973 aaPredicted RBP19.4■□□□□ 0.7
TMEM258-207ENST00000543510 DISP2A7MBM2 1401 aa19.39■□□□□ 0.69
TMEM258-207ENST00000543510 CDCA7Q9BWT1 371 aaPredicted RBP19.38■□□□□ 0.69
TMEM258-207ENST00000543510 QTRT2Q9H974 415 aaKnown RBP19.38■□□□□ 0.69
TMEM258-207ENST00000543510 IL16Q14005 1332 aa19.37■□□□□ 0.69
TMEM258-207ENST00000543510 RNMTO43148 476 aaKnown RBP19.37■□□□□ 0.69
TMEM258-207ENST00000543510 TEFQ10587 303 aa19.37■□□□□ 0.69
TMEM258-207ENST00000543510 DDB1Q16531 1140 aa19.37■□□□□ 0.69
TMEM258-207ENST00000543510 SCN11AQ9UI33 1791 aa19.37■□□□□ 0.69
TMEM258-207ENST00000543510 GNAI1P63096 354 aa19.36■□□□□ 0.69
TMEM258-207ENST00000543510 BARGINQ6ZT62 677 aa19.36■□□□□ 0.69
TMEM258-207ENST00000543510 GJD4Q96KN9 370 aaPredicted RBP19.36■□□□□ 0.69
TMEM258-207ENST00000543510 MIS18AQ9NYP9 233 aa19.36■□□□□ 0.69
TMEM258-207ENST00000543510 PLEKHG2Q9H7P9 1386 aa19.36■□□□□ 0.69
TMEM258-207ENST00000543510 IFT57Q9NWB7 429 aa19.36■□□□□ 0.69
TMEM258-207ENST00000543510 LRRC37A3O60309 1634 aa19.36■□□□□ 0.69
TMEM258-207ENST00000543510 FANCIQ9NVI1 1328 aa19.35■□□□□ 0.69
TMEM258-207ENST00000543510 HSP90AB1P08238 724 aaKnown RBP19.35■□□□□ 0.69
TMEM258-207ENST00000543510 PELP1Q8IZL8 1130 aaKnown RBP19.35■□□□□ 0.69
TMEM258-207ENST00000543510 ATRNO75882 1429 aa19.35■□□□□ 0.69
TMEM258-207ENST00000543510 GLI3P10071 1580 aa19.35■□□□□ 0.69
TMEM258-207ENST00000543510 TNS2Q63HR2 1409 aa19.34■□□□□ 0.69
TMEM258-207ENST00000543510 ZNF772Q68DY9 489 aaPredicted RBP19.33■□□□□ 0.69
TMEM258-207ENST00000543510 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.33■□□□□ 0.69
TMEM258-207ENST00000543510 DCAF5Q96JK2 942 aa19.33■□□□□ 0.69
TMEM258-207ENST00000543510 CFAP44Q96MT7 982 aa19.33■□□□□ 0.69
TMEM258-207ENST00000543510 MBIPQ9NS73 344 aa19.33■□□□□ 0.69
TMEM258-207ENST00000543510 TSPYL4Q9UJ04 414 aa19.33■□□□□ 0.69
TMEM258-207ENST00000543510 KDM6AO15550 1401 aaPredicted RBP19.33■□□□□ 0.68
TMEM258-207ENST00000543510 PLIN1O60240 522 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms