RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 SLC12A5Q9H2X9 1139 aa26.05■■□□□ 1.76
RAP1B-229ENST00000543393 FAM208AQ9UK61 1670 aaKnown RBP26.05■■□□□ 1.76
RAP1B-229ENST00000543393 ANKRD36BQ8N2N9 1353 aa26.05■■□□□ 1.76
RAP1B-229ENST00000543393 YBX3P16989 372 aaKnown RBP eCLIP26.03■■□□□ 1.763e-11■■■□□ 17.4
RAP1B-229ENST00000543393 GRIN3BO60391 1043 aa26.02■■□□□ 1.76
RAP1B-229ENST00000543393 NSD2O96028 1365 aa26.02■■□□□ 1.76
RAP1B-229ENST00000543393 NEUROD1Q13562 356 aa26.01■■□□□ 1.75
RAP1B-229ENST00000543393 A0A1W2PP64 1363 aa26■■□□□ 1.75
RAP1B-229ENST00000543393 MSH5O43196 834 aa25.99■■□□□ 1.75
RAP1B-229ENST00000543393 TERF2IPQ9NYB0 399 aa25.99■■□□□ 1.75
RAP1B-229ENST00000543393 CCNL1Q9UK58 526 aaPredicted RBP25.99■■□□□ 1.75
RAP1B-229ENST00000543393 COL23A1Q86Y22 540 aaPredicted RBP25.98■■□□□ 1.75
RAP1B-229ENST00000543393 RGPD2P0DJD1 1756 aa25.97■■□□□ 1.75
RAP1B-229ENST00000543393 ZCRB1Q8TBF4 217 aaKnown RBP25.96■■□□□ 1.75
RAP1B-229ENST00000543393 CARD11Q9BXL7 1154 aa25.95■■□□□ 1.74
RAP1B-229ENST00000543393 HOXC9P31274 260 aa25.94■■□□□ 1.74
RAP1B-229ENST00000543393 MSL1Q68DK7 614 aa25.94■■□□□ 1.74
RAP1B-229ENST00000543393 MEGF6O75095 1541 aa25.93■■□□□ 1.74
RAP1B-229ENST00000543393 MAP3K19Q56UN5 1328 aa25.93■■□□□ 1.74
RAP1B-229ENST00000543393 ATP10DQ9P241 1426 aa25.93■■□□□ 1.74
RAP1B-229ENST00000543393 USP47Q96K76 1375 aa25.93■■□□□ 1.74
RAP1B-229ENST00000543393 FBLN1P23142 703 aa25.91■■□□□ 1.74
RAP1B-229ENST00000543393 AMPHP49418 695 aa25.91■■□□□ 1.74
RAP1B-229ENST00000543393 COG3Q96JB2 828 aa25.9■■□□□ 1.74
RAP1B-229ENST00000543393 C5P01031 1676 aa25.88■■□□□ 1.73
RAP1B-229ENST00000543393 PUS7Q96PZ0 661 aaKnown RBP25.88■■□□□ 1.73
RAP1B-229ENST00000543393 GPBP1L1Q9HC44 474 aaPredicted RBP25.87■■□□□ 1.73
RAP1B-229ENST00000543393 CD2APQ9Y5K6 639 aa25.87■■□□□ 1.73
RAP1B-229ENST00000543393 NBPF6Q5VWK0 638 aa25.85■■□□□ 1.73
RAP1B-229ENST00000543393 NBPF4Q96M43 638 aa25.85■■□□□ 1.73
RAP1B-229ENST00000543393 TAF1LQ8IZX4 1826 aa25.84■■□□□ 1.73
RAP1B-229ENST00000543393 CGNL1Q0VF96 1302 aa25.83■■□□□ 1.73
RAP1B-229ENST00000543393 ADCY9O60503 1353 aa25.82■■□□□ 1.72
RAP1B-229ENST00000543393 USHBP1Q8N6Y0 703 aa25.82■■□□□ 1.72
RAP1B-229ENST00000543393 FLAD1Q8NFF5 587 aa25.82■■□□□ 1.72
RAP1B-229ENST00000543393 ZNF526Q8TF50 670 aaPredicted RBP25.82■■□□□ 1.72
RAP1B-229ENST00000543393 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
RAP1B-229ENST00000543393 RAPGEF4Q8WZA2 1011 aa25.81■■□□□ 1.72
RAP1B-229ENST00000543393 HSPA6P17066 643 aa25.8■■□□□ 1.72
RAP1B-229ENST00000543393 RRS1Q15050 365 aaKnown RBP25.8■■□□□ 1.72
RAP1B-229ENST00000543393 PALLDQ8WX93 1383 aa25.79■■□□□ 1.72
RAP1B-229ENST00000543393 HMGB2P26583 209 aaKnown RBP25.78■■□□□ 1.72
RAP1B-229ENST00000543393 TATP17735 454 aaPredicted RBP25.77■■□□□ 1.72
RAP1B-229ENST00000543393 C4BP0C0L5 1744 aa25.77■■□□□ 1.72
RAP1B-229ENST00000543393 MPRIPQ6WCQ1 1025 aa25.76■■□□□ 1.71
RAP1B-229ENST00000543393 TESK2Q96S53 571 aa25.76■■□□□ 1.71
RAP1B-229ENST00000543393 PCDH11XQ9BZA7 1347 aa25.76■■□□□ 1.71
RAP1B-229ENST00000543393 PCDH11YQ9BZA8 1340 aa25.76■■□□□ 1.71
RAP1B-229ENST00000543393 SMG6Q86US8 1419 aaKnown RBP25.76■■□□□ 1.71
RAP1B-229ENST00000543393 IGSF1Q8N6C5 1336 aa25.75■■□□□ 1.71
RAP1B-229ENST00000543393 AMIGO3Q86WK7 504 aa25.75■■□□□ 1.71
RAP1B-229ENST00000543393 WWC3Q9ULE0 1092 aa25.75■■□□□ 1.71
RAP1B-229ENST00000543393 TOGARAM1Q9Y4F4 1720 aa25.74■■□□□ 1.71
RAP1B-229ENST00000543393 AK7Q96M32 723 aa25.74■■□□□ 1.71
RAP1B-229ENST00000543393 UBR3Q6ZT12 1888 aa25.73■■□□□ 1.71
RAP1B-229ENST00000543393 ITGB4P16144 1822 aa25.73■■□□□ 1.71
RAP1B-229ENST00000543393 ST20-MTHFSA0A0A6YYL1 179 aa25.71■■□□□ 1.71
RAP1B-229ENST00000543393 FYB1O15117 783 aa25.71■■□□□ 1.71
RAP1B-229ENST00000543393 PHF14O94880 888 aa25.71■■□□□ 1.71
RAP1B-229ENST00000543393 SMIM5Q71RC9 77 aa25.71■■□□□ 1.71
RAP1B-229ENST00000543393 GGNBP2Q9H3C7 697 aa25.71■■□□□ 1.71
RAP1B-229ENST00000543393 CYP27B1O15528 508 aa25.7■■□□□ 1.7
RAP1B-229ENST00000543393 HSP90AB2PQ58FF8 381 aa25.7■■□□□ 1.7
RAP1B-229ENST00000543393 SMARCC1Q92922 1105 aaPredicted RBP25.7■■□□□ 1.7
RAP1B-229ENST00000543393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.68■■□□□ 1.7
RAP1B-229ENST00000543393 INSRP06213 1382 aa25.68■■□□□ 1.7
RAP1B-229ENST00000543393 KIF3CO14782 793 aa25.67■■□□□ 1.7
RAP1B-229ENST00000543393 NSD3Q9BZ95 1437 aa25.67■■□□□ 1.7
RAP1B-229ENST00000543393 TONSLQ96HA7 1378 aa25.66■■□□□ 1.7
RAP1B-229ENST00000543393 SSFA2P28290 1259 aa25.65■■□□□ 1.7
RAP1B-229ENST00000543393 PIGBQ92521 554 aa25.65■■□□□ 1.7
RAP1B-229ENST00000543393 FLT4P35916 1363 aa25.65■■□□□ 1.7
RAP1B-229ENST00000543393 PKD1L3Q7Z443 1732 aa25.64■■□□□ 1.7
RAP1B-229ENST00000543393 SLC24A1O60721 1099 aa25.64■■□□□ 1.7
RAP1B-229ENST00000543393 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.7
RAP1B-229ENST00000543393 LINC00116Q8NCU8 138 aa25.62■■□□□ 1.69
RAP1B-229ENST00000543393 KIF24Q5T7B8 1368 aa25.61■■□□□ 1.69
RAP1B-229ENST00000543393 LOC102724428A0A0B4J2F2 783 aa25.61■■□□□ 1.69
RAP1B-229ENST00000543393 SIK1P57059 783 aa25.61■■□□□ 1.69
RAP1B-229ENST00000543393 CICQ96RK0 1608 aaPredicted RBP25.61■■□□□ 1.69
RAP1B-229ENST00000543393 KIF20BQ96Q89 1820 aa25.6■■□□□ 1.69
RAP1B-229ENST00000543393 NKX1-1Q15270 411 aaPredicted RBP25.6■■□□□ 1.69
RAP1B-229ENST00000543393 GNPATO15228 680 aa25.57■■□□□ 1.68
RAP1B-229ENST00000543393 MMP10P09238 476 aa25.56■■□□□ 1.68
RAP1B-229ENST00000543393 APLP1P51693 650 aa25.56■■□□□ 1.68
RAP1B-229ENST00000543393 ITPK1Q13572 414 aa25.56■■□□□ 1.68
RAP1B-229ENST00000543393 SPG7Q9UQ90 795 aa25.56■■□□□ 1.68
RAP1B-229ENST00000543393 EMILIN1Q9Y6C2 1016 aa25.56■■□□□ 1.68
RAP1B-229ENST00000543393 KIF13BQ9NQT8 1826 aa25.56■■□□□ 1.68
RAP1B-229ENST00000543393 PXDNLA1KZ92 1463 aa25.55■■□□□ 1.68
RAP1B-229ENST00000543393 TMF1P82094 1093 aa25.55■■□□□ 1.68
RAP1B-229ENST00000543393 TMOD3Q9NYL9 352 aa25.55■■□□□ 1.68
RAP1B-229ENST00000543393 ASAP1Q9ULH1 1129 aa25.55■■□□□ 1.68
RAP1B-229ENST00000543393 NCAPD2Q15021 1401 aa25.54■■□□□ 1.68
RAP1B-229ENST00000543393 KIAA1551Q9HCM1 1747 aa25.54■■□□□ 1.68
RAP1B-229ENST00000543393 N4BP2Q86UW6 1770 aaPredicted RBP25.54■■□□□ 1.68
RAP1B-229ENST00000543393 ATP6V1AP38606 617 aa25.54■■□□□ 1.68
RAP1B-229ENST00000543393 TOMM70O94826 608 aa25.53■■□□□ 1.68
RAP1B-229ENST00000543393 DNAJC5GQ8N7S2 189 aa25.52■■□□□ 1.68
RAP1B-229ENST00000543393 BCS1LQ9Y276 419 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms