RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 REC8O95072 547 aa29.02■■■□□ 2.24
SHD-201ENST00000543264 CCDC39Q9UFE4 941 aa29.02■■■□□ 2.24
SHD-201ENST00000543264 ABCC3O15438 1527 aa29.02■■■□□ 2.24
SHD-201ENST00000543264 PTPRMP28827 1452 aa29■■■□□ 2.23
SHD-201ENST00000543264 SIGLEC1Q9BZZ2 1709 aa28.99■■■□□ 2.23
SHD-201ENST00000543264 YTHDC2Q9H6S0 1430 aaKnown RBP28.99■■■□□ 2.23
SHD-201ENST00000543264 MCM5P33992 734 aa28.99■■■□□ 2.23
SHD-201ENST00000543264 CEP85Q6P2H3 762 aa28.99■■■□□ 2.23
SHD-201ENST00000543264 ARID3AQ99856 593 aa28.99■■■□□ 2.23
SHD-201ENST00000543264 FRMPD1Q5SYB0 1578 aa28.99■■■□□ 2.23
SHD-201ENST00000543264 RPAP2Q8IXW5 612 aaPredicted RBP28.99■■■□□ 2.23
SHD-201ENST00000543264 HECW2Q9P2P5 1572 aa28.98■■■□□ 2.23
SHD-201ENST00000543264 KIF24Q5T7B8 1368 aa28.98■■■□□ 2.23
SHD-201ENST00000543264 ERC2O15083 957 aa28.98■■■□□ 2.23
SHD-201ENST00000543264 IL13P35225 146 aa28.98■■■□□ 2.23
SHD-201ENST00000543264 NEK4P51957 841 aa28.97■■■□□ 2.23
SHD-201ENST00000543264 ASXL2Q76L83 1435 aa28.97■■■□□ 2.23
SHD-201ENST00000543264 LMOD3Q0VAK6 560 aa28.96■■■□□ 2.23
SHD-201ENST00000543264 OSCARQ8IYS5 282 aa28.96■■■□□ 2.23
SHD-201ENST00000543264 TMX3Q96JJ7 454 aa28.95■■■□□ 2.23
SHD-201ENST00000543264 KIF20BQ96Q89 1820 aa28.95■■■□□ 2.23
SHD-201ENST00000543264 ATP10DQ9P241 1426 aa28.95■■■□□ 2.22
SHD-201ENST00000543264 PIK3C2BO00750 1634 aa28.95■■■□□ 2.22
SHD-201ENST00000543264 MBD3O95983 291 aa28.95■■■□□ 2.22
SHD-201ENST00000543264 PTMAP06454 111 aaKnown RBP28.95■■■□□ 2.22
SHD-201ENST00000543264 DYNC1I1O14576 645 aa28.94■■■□□ 2.22
SHD-201ENST00000543264 KRT24Q2M2I5 525 aa28.94■■■□□ 2.22
SHD-201ENST00000543264 MAP2P11137 1827 aaKnown RBP28.94■■■□□ 2.22
SHD-201ENST00000543264 SASS6Q6UVJ0 657 aa28.93■■■□□ 2.22
SHD-201ENST00000543264 ZBTB7CA1YPR0 619 aa28.92■■■□□ 2.22
SHD-201ENST00000543264 MEIS3Q99687 375 aa28.92■■■□□ 2.22
SHD-201ENST00000543264 YEATS2Q9ULM3 1422 aa28.92■■■□□ 2.22
SHD-201ENST00000543264 RIMS2Q9UQ26 1411 aa28.91■■■□□ 2.22
SHD-201ENST00000543264 NOL8Q76FK4 1167 aaKnown RBP28.91■■■□□ 2.22
SHD-201ENST00000543264 FOXD4L6Q3SYB3 417 aaPredicted RBP28.9■■■□□ 2.22
SHD-201ENST00000543264 FOXD4L3Q6VB84 417 aaPredicted RBP28.9■■■□□ 2.22
SHD-201ENST00000543264 TSPY26PQ9H489 355 aa28.9■■■□□ 2.22
SHD-201ENST00000543264 ZRANB1Q9UGI0 708 aa28.9■■■□□ 2.22
SHD-201ENST00000543264 RTL1A6NKG5 1358 aa28.89■■■□□ 2.22
SHD-201ENST00000543264 BRD1O95696 1058 aa28.88■■■□□ 2.21
SHD-201ENST00000543264 MSH6P52701 1360 aa28.88■■■□□ 2.21
SHD-201ENST00000543264 CLTCQ00610 1675 aaKnown RBP28.88■■■□□ 2.21
SHD-201ENST00000543264 MLH3Q9UHC1 1453 aa28.87■■■□□ 2.21
SHD-201ENST00000543264 POGZQ7Z3K3 1410 aa28.87■■■□□ 2.21
SHD-201ENST00000543264 NME9Q86XW9 330 aa28.87■■■□□ 2.21
SHD-201ENST00000543264 SLC52A1Q9NWF4 448 aa28.87■■■□□ 2.21
SHD-201ENST00000543264 MPNDQ8N594 471 aa28.87■■■□□ 2.21
SHD-201ENST00000543264 DLG5Q8TDM6 1919 aa28.87■■■□□ 2.21
SHD-201ENST00000543264 RRS1Q15050 365 aaKnown RBP28.86■■■□□ 2.21
SHD-201ENST00000543264 MTERF4Q7Z6M4 381 aaKnown RBP28.86■■■□□ 2.21
SHD-201ENST00000543264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.86■■■□□ 2.21
SHD-201ENST00000543264 ARHGEF40Q8TER5 1519 aa28.85■■■□□ 2.21
SHD-201ENST00000543264 PDE1AP54750 535 aa28.85■■■□□ 2.21
SHD-201ENST00000543264 PRDM4Q9UKN5 801 aa28.85■■■□□ 2.21
SHD-201ENST00000543264 KIAA2012Q0VF49 1180 aa28.85■■■□□ 2.21
SHD-201ENST00000543264 WAPLQ7Z5K2 1190 aa28.85■■■□□ 2.21
SHD-201ENST00000543264 DNTTIP2Q5QJE6 756 aaKnown RBP28.84■■■□□ 2.21
SHD-201ENST00000543264 TSHZ3Q63HK5 1081 aa28.84■■■□□ 2.21
SHD-201ENST00000543264 GDPD2Q9HCC8 539 aa28.84■■■□□ 2.21
SHD-201ENST00000543264 RGS12O14924 1447 aa28.84■■■□□ 2.21
SHD-201ENST00000543264 SYAP1Q96A49 352 aaPredicted RBP28.83■■■□□ 2.21
SHD-201ENST00000543264 MCM2P49736 904 aa28.82■■■□□ 2.2
SHD-201ENST00000543264 PALD1Q9ULE6 856 aa28.82■■■□□ 2.2
SHD-201ENST00000543264 MYO5BQ9ULV0 1848 aa28.82■■■□□ 2.2
SHD-201ENST00000543264 HMMRO75330 724 aa28.81■■■□□ 2.2
SHD-201ENST00000543264 GADD45BO75293 160 aaPredicted RBP28.81■■■□□ 2.2
SHD-201ENST00000543264 RAPGEF3O95398 923 aa28.81■■■□□ 2.2
SHD-201ENST00000543264 CUL4AQ13619 759 aa28.81■■■□□ 2.2
SHD-201ENST00000543264 ZNF830Q96NB3 372 aaPredicted RBP28.8■■■□□ 2.2
SHD-201ENST00000543264 OSBPL3Q9H4L5 887 aa28.8■■■□□ 2.2
SHD-201ENST00000543264 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.79■■■□□ 2.2
SHD-201ENST00000543264 HAP1P54257 671 aaPredicted RBP28.79■■■□□ 2.2
SHD-201ENST00000543264 SLC4A10Q6U841 1118 aa28.79■■■□□ 2.2
SHD-201ENST00000543264 ESYT1Q9BSJ8 1104 aa28.79■■■□□ 2.2
SHD-201ENST00000543264 MCCP23508 829 aa28.78■■■□□ 2.2
SHD-201ENST00000543264 SLC4A2P04920 1241 aa28.78■■■□□ 2.2
SHD-201ENST00000543264 MCM10Q7L590 875 aa28.78■■■□□ 2.2
SHD-201ENST00000543264 ANO2Q9NQ90 1003 aa28.77■■■□□ 2.2
SHD-201ENST00000543264 EXOC6BQ9Y2D4 811 aa28.77■■■□□ 2.2
SHD-201ENST00000543264 CPSF1Q10570 1443 aaKnown RBP28.77■■■□□ 2.2
SHD-201ENST00000543264 PTPRCP08575 1304 aa28.77■■■□□ 2.2
SHD-201ENST00000543264 TPRNQ4KMQ1 711 aa28.77■■■□□ 2.2
SHD-201ENST00000543264 JARID2Q92833 1246 aaPredicted RBP28.77■■■□□ 2.2
SHD-201ENST00000543264 USP48Q86UV5 1035 aa28.76■■■□□ 2.2
SHD-201ENST00000543264 AEBP1Q8IUX7 1158 aa28.76■■■□□ 2.19
SHD-201ENST00000543264 INTS4Q96HW7 963 aaKnown RBP28.76■■■□□ 2.19
SHD-201ENST00000543264 CDK12Q9NYV4 1490 aaPredicted RBP28.76■■■□□ 2.19
SHD-201ENST00000543264 CHL1O00533 1208 aa28.75■■■□□ 2.19
SHD-201ENST00000543264 RILPL2Q969X0 211 aa28.75■■■□□ 2.19
SHD-201ENST00000543264 COG3Q96JB2 828 aa28.75■■■□□ 2.19
SHD-201ENST00000543264 UPF3BQ9BZI7 483 aaKnown RBP28.75■■■□□ 2.19
SHD-201ENST00000543264 PHF14O94880 888 aa28.75■■■□□ 2.19
SHD-201ENST00000543264 ATP7BP35670 1465 aa28.74■■■□□ 2.19
SHD-201ENST00000543264 F6X3S4 739 aa28.74■■■□□ 2.19
SHD-201ENST00000543264 MYRIPQ8NFW9 859 aa28.74■■■□□ 2.19
SHD-201ENST00000543264 PRDM10Q9NQV6 1147 aa28.74■■■□□ 2.19
SHD-201ENST00000543264 TRIM6-TRIM34B2RNG4 842 aa28.73■■■□□ 2.19
SHD-201ENST00000543264 SMAP1Q8IYB5 467 aaPredicted RBP28.73■■■□□ 2.19
SHD-201ENST00000543264 TSC1Q92574 1164 aa28.73■■■□□ 2.19
SHD-201ENST00000543264 USP25Q9UHP3 1055 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms