RNA–Protein interactions for RNA: ENST00000543259.1

C12orf56-206, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 4

Gene C12orf56, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-206ENST00000543259 YY1P25490 414 aa16.43■□□□□ 0.22
C12orf56-206ENST00000543259 LTV1Q96GA3 475 aaPredicted RBP16.42■□□□□ 0.22
C12orf56-206ENST00000543259 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
C12orf56-206ENST00000543259 INSRP06213 1382 aa16.41■□□□□ 0.22
C12orf56-206ENST00000543259 TUBGCP6Q96RT7 1819 aa16.41■□□□□ 0.22
C12orf56-206ENST00000543259 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
C12orf56-206ENST00000543259 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
C12orf56-206ENST00000543259 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
C12orf56-206ENST00000543259 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
C12orf56-206ENST00000543259 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
C12orf56-206ENST00000543259 RGPD2P0DJD1 1756 aa16.39■□□□□ 0.21
C12orf56-206ENST00000543259 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
C12orf56-206ENST00000543259 SGIP1Q9BQI5 828 aa16.39■□□□□ 0.21
C12orf56-206ENST00000543259 CARD14Q9BXL6 1004 aa16.39■□□□□ 0.21
C12orf56-206ENST00000543259 STK32BQ9NY57 414 aa16.39■□□□□ 0.21
C12orf56-206ENST00000543259 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
C12orf56-206ENST00000543259 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
C12orf56-206ENST00000543259 NSD2O96028 1365 aa16.38■□□□□ 0.21
C12orf56-206ENST00000543259 LY75O60449 1722 aa16.37■□□□□ 0.21
C12orf56-206ENST00000543259 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
C12orf56-206ENST00000543259 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
C12orf56-206ENST00000543259 CHD4Q14839 1912 aa16.37■□□□□ 0.21
C12orf56-206ENST00000543259 MTFR1LQ9H019 292 aa16.36■□□□□ 0.21
C12orf56-206ENST00000543259 KAT6BQ8WYB5 2073 aa16.35■□□□□ 0.21
C12orf56-206ENST00000543259 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
C12orf56-206ENST00000543259 FBLN1P23142 703 aa16.34■□□□□ 0.21
C12orf56-206ENST00000543259 ZNF827Q17R98 1081 aa16.34■□□□□ 0.21
C12orf56-206ENST00000543259 ZCRB1Q8TBF4 217 aaKnown RBP16.34■□□□□ 0.21
C12orf56-206ENST00000543259 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
C12orf56-206ENST00000543259 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
C12orf56-206ENST00000543259 MEGF6O75095 1541 aa16.34■□□□□ 0.21
C12orf56-206ENST00000543259 TATP17735 454 aaPredicted RBP16.33■□□□□ 0.2
C12orf56-206ENST00000543259 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.2
C12orf56-206ENST00000543259 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.2
C12orf56-206ENST00000543259 LRRC4BQ9NT99 713 aa16.33■□□□□ 0.2
C12orf56-206ENST00000543259 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
C12orf56-206ENST00000543259 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
C12orf56-206ENST00000543259 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
C12orf56-206ENST00000543259 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
C12orf56-206ENST00000543259 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
C12orf56-206ENST00000543259 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
C12orf56-206ENST00000543259 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
C12orf56-206ENST00000543259 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
C12orf56-206ENST00000543259 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
C12orf56-206ENST00000543259 UTRNP46939 3433 aa16.31■□□□□ 0.2
C12orf56-206ENST00000543259 PLEKHG2Q9H7P9 1386 aa16.3■□□□□ 0.2
C12orf56-206ENST00000543259 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
C12orf56-206ENST00000543259 PANK3Q9H999 370 aa16.3■□□□□ 0.2
C12orf56-206ENST00000543259 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
C12orf56-206ENST00000543259 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
C12orf56-206ENST00000543259 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
C12orf56-206ENST00000543259 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
C12orf56-206ENST00000543259 KNSTRNQ9Y448 316 aa16.28■□□□□ 0.2
C12orf56-206ENST00000543259 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
C12orf56-206ENST00000543259 PKD1L3Q7Z443 1732 aa16.27■□□□□ 0.19
C12orf56-206ENST00000543259 PNPLA7Q6ZV29 1317 aa16.26■□□□□ 0.19
C12orf56-206ENST00000543259 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
C12orf56-206ENST00000543259 ARXQ96QS3 562 aa16.26■□□□□ 0.19
C12orf56-206ENST00000543259 POLKQ9UBT6 870 aa16.26■□□□□ 0.19
C12orf56-206ENST00000543259 C5P01031 1676 aa16.25■□□□□ 0.19
C12orf56-206ENST00000543259 ZNF784Q8NCA9 323 aaPredicted RBP16.25■□□□□ 0.19
C12orf56-206ENST00000543259 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
C12orf56-206ENST00000543259 TOGARAM1Q9Y4F4 1720 aa16.25■□□□□ 0.19
C12orf56-206ENST00000543259 TAF1LQ8IZX4 1826 aa16.24■□□□□ 0.19
C12orf56-206ENST00000543259 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
C12orf56-206ENST00000543259 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
C12orf56-206ENST00000543259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
C12orf56-206ENST00000543259 KIF7Q2M1P5 1343 aa16.23■□□□□ 0.19
C12orf56-206ENST00000543259 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
C12orf56-206ENST00000543259 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
C12orf56-206ENST00000543259 KCNQ4P56696 695 aa16.21■□□□□ 0.19
C12orf56-206ENST00000543259 EYA1Q99502 592 aa16.21■□□□□ 0.19
C12orf56-206ENST00000543259 ITGB4P16144 1822 aa16.2■□□□□ 0.18
C12orf56-206ENST00000543259 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
C12orf56-206ENST00000543259 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
C12orf56-206ENST00000543259 CYP27B1O15528 508 aa16.18■□□□□ 0.18
C12orf56-206ENST00000543259 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
C12orf56-206ENST00000543259 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
C12orf56-206ENST00000543259 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
C12orf56-206ENST00000543259 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
C12orf56-206ENST00000543259 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
C12orf56-206ENST00000543259 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
C12orf56-206ENST00000543259 C4BP0C0L5 1744 aa16.16■□□□□ 0.18
C12orf56-206ENST00000543259 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
C12orf56-206ENST00000543259 GOLGB1Q14789 3259 aaKnown RBP16.16■□□□□ 0.18
C12orf56-206ENST00000543259 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
C12orf56-206ENST00000543259 NPC1L1Q9UHC9 1359 aa16.15■□□□□ 0.18
C12orf56-206ENST00000543259 HSP90AB1P08238 724 aaKnown RBP16.15■□□□□ 0.18
C12orf56-206ENST00000543259 POLD1P28340 1107 aa16.15■□□□□ 0.18
C12orf56-206ENST00000543259 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
C12orf56-206ENST00000543259 AMOTQ4VCS5 1084 aa16.14■□□□□ 0.17
C12orf56-206ENST00000543259 MPRIPQ6WCQ1 1025 aa16.14■□□□□ 0.17
C12orf56-206ENST00000543259 PHKG2P15735 406 aa16.13■□□□□ 0.17
C12orf56-206ENST00000543259 PLEKHO1Q53GL0 409 aaPredicted RBP16.13■□□□□ 0.17
C12orf56-206ENST00000543259 TMOD3Q9NYL9 352 aa16.13■□□□□ 0.17
C12orf56-206ENST00000543259 GPR162Q16538 588 aa16.12■□□□□ 0.17
C12orf56-206ENST00000543259 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
C12orf56-206ENST00000543259 KLHL34Q8N239 644 aa16.11■□□□□ 0.17
C12orf56-206ENST00000543259 KDRP35968 1356 aa16.11■□□□□ 0.17
C12orf56-206ENST00000543259 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms