RNA–Protein interactions for RNA: ENST00000543214.1

FAM9A-202, Transcript of family with sequence similarity 9 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM9A, Length 1,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM9A-202ENST00000543214 MIER1Q8N108 512 aa23.94■■□□□ 1.42
FAM9A-202ENST00000543214 PARP4Q9UKK3 1724 aaKnown RBP23.93■■□□□ 1.42
FAM9A-202ENST00000543214 FCHSD2O94868 740 aa23.92■■□□□ 1.42
FAM9A-202ENST00000543214 ZCRB1Q8TBF4 217 aaKnown RBP23.91■■□□□ 1.42
FAM9A-202ENST00000543214 RSPH6AQ9H0K4 717 aa23.91■■□□□ 1.42
FAM9A-202ENST00000543214 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
FAM9A-202ENST00000543214 LRRC37A3O60309 1634 aa23.9■■□□□ 1.42
FAM9A-202ENST00000543214 CCER2I3L3R5 266 aa23.9■■□□□ 1.42
FAM9A-202ENST00000543214 PDE3BQ13370 1112 aa23.9■■□□□ 1.42
FAM9A-202ENST00000543214 TNS2Q63HR2 1409 aa23.9■■□□□ 1.42
FAM9A-202ENST00000543214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.89■■□□□ 1.42
FAM9A-202ENST00000543214 PRKAR2BP31323 418 aa23.89■■□□□ 1.41
FAM9A-202ENST00000543214 SPG7Q9UQ90 795 aa23.89■■□□□ 1.41
FAM9A-202ENST00000543214 PLEKHO1Q53GL0 409 aaPredicted RBP23.88■■□□□ 1.41
FAM9A-202ENST00000543214 KRT27Q7Z3Y8 459 aa23.88■■□□□ 1.41
FAM9A-202ENST00000543214 PNISRQ8TF01 805 aaKnown RBP23.88■■□□□ 1.41
FAM9A-202ENST00000543214 ADAMTS8Q9UP79 889 aa23.88■■□□□ 1.41
FAM9A-202ENST00000543214 AMOTQ4VCS5 1084 aa23.87■■□□□ 1.41
FAM9A-202ENST00000543214 PNNQ9H307 717 aaKnown RBP23.87■■□□□ 1.41
FAM9A-202ENST00000543214 BRWD3Q6RI45 1802 aa23.86■■□□□ 1.41
FAM9A-202ENST00000543214 DDX54Q8TDD1 881 aaKnown RBP23.85■■□□□ 1.41
FAM9A-202ENST00000543214 PKD1L3Q7Z443 1732 aa23.85■■□□□ 1.41
FAM9A-202ENST00000543214 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
FAM9A-202ENST00000543214 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
FAM9A-202ENST00000543214 MARCH10Q8NA82 808 aaPredicted RBP23.84■■□□□ 1.41
FAM9A-202ENST00000543214 NEFMP07197 916 aa23.83■■□□□ 1.41
FAM9A-202ENST00000543214 PLEKHF1Q96S99 279 aa23.83■■□□□ 1.41
FAM9A-202ENST00000543214 PHACTR3Q96KR7 559 aa23.82■■□□□ 1.4
FAM9A-202ENST00000543214 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
FAM9A-202ENST00000543214 CYP27B1O15528 508 aa23.8■■□□□ 1.4
FAM9A-202ENST00000543214 MTHFSDQ2M296 383 aaKnown RBP23.8■■□□□ 1.4
FAM9A-202ENST00000543214 FAM182BQ5T319 152 aa23.8■■□□□ 1.4
FAM9A-202ENST00000543214 ZNF530Q6P9A1 599 aaPredicted RBP23.8■■□□□ 1.4
FAM9A-202ENST00000543214 ILDR2Q71H61 639 aa23.8■■□□□ 1.4
FAM9A-202ENST00000543214 IFNL2Q8IZJ0 200 aa23.79■■□□□ 1.4
FAM9A-202ENST00000543214 MAPK8IP3Q9UPT6 1336 aa23.79■■□□□ 1.4
FAM9A-202ENST00000543214 PHKG2P15735 406 aa23.79■■□□□ 1.4
FAM9A-202ENST00000543214 GAS2L2Q8NHY3 880 aa23.79■■□□□ 1.4
FAM9A-202ENST00000543214 C1orf141Q5JVX7 400 aa23.78■■□□□ 1.4
FAM9A-202ENST00000543214 CCDC146Q8IYE0 955 aa23.78■■□□□ 1.4
FAM9A-202ENST00000543214 FAM9BQ8IZU0 186 aa23.78■■□□□ 1.4
FAM9A-202ENST00000543214 RUNDC1Q96C34 613 aa23.78■■□□□ 1.4
FAM9A-202ENST00000543214 AKAP4Q5JQC9 854 aa23.76■■□□□ 1.39
FAM9A-202ENST00000543214 FAM196AQ6ZSG2 479 aa23.76■■□□□ 1.39
FAM9A-202ENST00000543214 NKX1-1Q15270 411 aaPredicted RBP23.74■■□□□ 1.39
FAM9A-202ENST00000543214 BCL9O00512 1426 aa23.74■■□□□ 1.39
FAM9A-202ENST00000543214 HSP90AB1P08238 724 aaKnown RBP23.74■■□□□ 1.39
FAM9A-202ENST00000543214 NFE2L2Q16236 605 aa23.72■■□□□ 1.39
FAM9A-202ENST00000543214 GNAT3A8MTJ3 354 aa23.71■■□□□ 1.39
FAM9A-202ENST00000543214 EP400Q96L91 3159 aa23.71■■□□□ 1.39
FAM9A-202ENST00000543214 DCAF5Q96JK2 942 aa23.7■■□□□ 1.38
FAM9A-202ENST00000543214 MAP3K5Q99683 1374 aa23.7■■□□□ 1.38
FAM9A-202ENST00000543214 TMPOP42166 694 aaKnown RBP23.69■■□□□ 1.38
FAM9A-202ENST00000543214 MPRIPQ6WCQ1 1025 aa23.69■■□□□ 1.38
FAM9A-202ENST00000543214 ACSBG1Q96GR2 724 aa23.68■■□□□ 1.38
FAM9A-202ENST00000543214 APAF1O14727 1248 aa23.67■■□□□ 1.38
FAM9A-202ENST00000543214 KDM6AO15550 1401 aaPredicted RBP23.66■■□□□ 1.38
FAM9A-202ENST00000543214 HTATSF1O43719 755 aaKnown RBP23.66■■□□□ 1.38
FAM9A-202ENST00000543214 RIPK4P57078 832 aa23.66■■□□□ 1.38
FAM9A-202ENST00000543214 RTF1Q92541 710 aaKnown RBP23.66■■□□□ 1.38
FAM9A-202ENST00000543214 RNMTO43148 476 aaKnown RBP23.65■■□□□ 1.38
FAM9A-202ENST00000543214 TRIM37O94972 964 aa23.65■■□□□ 1.38
FAM9A-202ENST00000543214 PRIM1P49642 420 aaKnown RBP23.65■■□□□ 1.38
FAM9A-202ENST00000543214 LGR6Q9HBX8 967 aa23.65■■□□□ 1.38
FAM9A-202ENST00000543214 RRP7AQ9Y3A4 280 aaKnown RBP23.65■■□□□ 1.38
FAM9A-202ENST00000543214 ERVV-2B6SEH9 535 aa23.64■■□□□ 1.38
FAM9A-202ENST00000543214 KCNQ2O43526 872 aa23.64■■□□□ 1.38
FAM9A-202ENST00000543214 NEUROD2Q15784 382 aa23.64■■□□□ 1.38
FAM9A-202ENST00000543214 DOT1LQ8TEK3 1739 aa23.64■■□□□ 1.37
FAM9A-202ENST00000543214 SYTL4Q96C24 671 aaPredicted RBP23.64■■□□□ 1.37
FAM9A-202ENST00000543214 SBF2Q86WG5 1849 aa23.63■■□□□ 1.37
FAM9A-202ENST00000543214 IL17REQ8NFR9 667 aa23.63■■□□□ 1.37
FAM9A-202ENST00000543214 BCL11BQ9C0K0 894 aaPredicted RBP23.63■■□□□ 1.37
FAM9A-202ENST00000543214 TOGARAM1Q9Y4F4 1720 aa23.62■■□□□ 1.37
FAM9A-202ENST00000543214 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
FAM9A-202ENST00000543214 SCN11AQ9UI33 1791 aa23.61■■□□□ 1.37
FAM9A-202ENST00000543214 DLG5Q8TDM6 1919 aa23.61■■□□□ 1.37
FAM9A-202ENST00000543214 NHSQ6T4R5 1651 aa23.61■■□□□ 1.37
FAM9A-202ENST00000543214 ADAMTS7Q9UKP4 1686 aa23.61■■□□□ 1.37
FAM9A-202ENST00000543214 CABP4P57796 275 aa23.61■■□□□ 1.37
FAM9A-202ENST00000543214 MCM10Q7L590 875 aa23.61■■□□□ 1.37
FAM9A-202ENST00000543214 DCTN1Q14203 1278 aa23.6■■□□□ 1.37
FAM9A-202ENST00000543214 PTF1AQ7RTS3 328 aa23.6■■□□□ 1.37
FAM9A-202ENST00000543214 TMOD3Q9NYL9 352 aa23.6■■□□□ 1.37
FAM9A-202ENST00000543214 CEMIPQ8WUJ3 1361 aa23.6■■□□□ 1.37
FAM9A-202ENST00000543214 KAT6BQ8WYB5 2073 aa23.6■■□□□ 1.37
FAM9A-202ENST00000543214 CCDC125Q86Z20 511 aa23.59■■□□□ 1.37
FAM9A-202ENST00000543214 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
FAM9A-202ENST00000543214 TRIM35Q9UPQ4 493 aa23.59■■□□□ 1.37
FAM9A-202ENST00000543214 TEFQ10587 303 aa23.58■■□□□ 1.36
FAM9A-202ENST00000543214 NFATC2IPQ8NCF5 419 aa23.58■■□□□ 1.36
FAM9A-202ENST00000543214 PIGBQ92521 554 aa23.58■■□□□ 1.36
FAM9A-202ENST00000543214 SENP3-EIF4A1A0A087X0R7 540 aa23.57■■□□□ 1.36
FAM9A-202ENST00000543214 SF3B2Q13435 895 aaKnown RBP23.57■■□□□ 1.36
FAM9A-202ENST00000543214 UPF1Q92900 1129 aaKnown RBP eCLIP23.57■■□□□ 1.36
FAM9A-202ENST00000543214 ITGB4P16144 1822 aa23.57■■□□□ 1.36
FAM9A-202ENST00000543214 MRC1P22897 1456 aa23.57■■□□□ 1.36
FAM9A-202ENST00000543214 VIRMAQ69YN4 1812 aaKnown RBP23.56■■□□□ 1.36
FAM9A-202ENST00000543214 NCBP3Q53F19 620 aaKnown RBP23.56■■□□□ 1.36
FAM9A-202ENST00000543214 APBA3O96018 575 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms