RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 KCNQ4P56696 695 aa17.92■□□□□ 0.46
GPN3-203ENST00000543199 TMF1P82094 1093 aa17.92■□□□□ 0.46
GPN3-203ENST00000543199 FYB1O15117 783 aa17.91■□□□□ 0.46
GPN3-203ENST00000543199 PRIM1P49642 420 aaKnown RBP17.91■□□□□ 0.46
GPN3-203ENST00000543199 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
GPN3-203ENST00000543199 DOT1LQ8TEK3 1739 aa17.91■□□□□ 0.46
GPN3-203ENST00000543199 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
GPN3-203ENST00000543199 USHBP1Q8N6Y0 703 aa17.9■□□□□ 0.46
GPN3-203ENST00000543199 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
GPN3-203ENST00000543199 AKT1S1Q96B36 256 aa17.9■□□□□ 0.46
GPN3-203ENST00000543199 ARXQ96QS3 562 aa17.9■□□□□ 0.46
GPN3-203ENST00000543199 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
GPN3-203ENST00000543199 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
GPN3-203ENST00000543199 SHANK3Q9BYB0 1731 aa17.9■□□□□ 0.46
GPN3-203ENST00000543199 NSD2O96028 1365 aa17.88■□□□□ 0.45
GPN3-203ENST00000543199 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
GPN3-203ENST00000543199 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
GPN3-203ENST00000543199 PNPLA7Q6ZV29 1317 aa17.87■□□□□ 0.45
GPN3-203ENST00000543199 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
GPN3-203ENST00000543199 KLHL34Q8N239 644 aa17.86■□□□□ 0.45
GPN3-203ENST00000543199 RAPGEF4Q8WZA2 1011 aa17.86■□□□□ 0.45
GPN3-203ENST00000543199 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
GPN3-203ENST00000543199 GOLGB1Q14789 3259 aaKnown RBP17.85■□□□□ 0.45
GPN3-203ENST00000543199 KIF20BQ96Q89 1820 aa17.84■□□□□ 0.45
GPN3-203ENST00000543199 CCNL1Q9UK58 526 aaPredicted RBP17.84■□□□□ 0.45
GPN3-203ENST00000543199 MAP3K5Q99683 1374 aa17.84■□□□□ 0.45
GPN3-203ENST00000543199 LY75O60449 1722 aa17.84■□□□□ 0.45
GPN3-203ENST00000543199 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
GPN3-203ENST00000543199 POLD1P28340 1107 aa17.83■□□□□ 0.45
GPN3-203ENST00000543199 CDCA8Q53HL2 280 aa17.83■□□□□ 0.45
GPN3-203ENST00000543199 SLC16A10Q8TF71 515 aa17.83■□□□□ 0.45
GPN3-203ENST00000543199 CGNL1Q0VF96 1302 aa17.83■□□□□ 0.45
GPN3-203ENST00000543199 QSER1Q2KHR3 1735 aa17.83■□□□□ 0.45
GPN3-203ENST00000543199 FLT4P35916 1363 aa17.83■□□□□ 0.45
GPN3-203ENST00000543199 TATP17735 454 aaPredicted RBP17.83■□□□□ 0.44
GPN3-203ENST00000543199 ZNF784Q8NCA9 323 aaPredicted RBP17.83■□□□□ 0.44
GPN3-203ENST00000543199 INSRP06213 1382 aa17.83■□□□□ 0.44
GPN3-203ENST00000543199 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
GPN3-203ENST00000543199 PCDH11XQ9BZA7 1347 aa17.8■□□□□ 0.44
GPN3-203ENST00000543199 PCDH11YQ9BZA8 1340 aa17.8■□□□□ 0.44
GPN3-203ENST00000543199 CARD14Q9BXL6 1004 aa17.8■□□□□ 0.44
GPN3-203ENST00000543199 EMILIN1Q9Y6C2 1016 aa17.8■□□□□ 0.44
GPN3-203ENST00000543199 GPR162Q16538 588 aa17.8■□□□□ 0.44
GPN3-203ENST00000543199 KIF24Q5T7B8 1368 aa17.79■□□□□ 0.44
GPN3-203ENST00000543199 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
GPN3-203ENST00000543199 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
GPN3-203ENST00000543199 MPRIPQ6WCQ1 1025 aa17.77■□□□□ 0.44
GPN3-203ENST00000543199 COL24A1Q17RW2 1714 aa17.77■□□□□ 0.44
GPN3-203ENST00000543199 CHD4Q14839 1912 aa17.77■□□□□ 0.43
GPN3-203ENST00000543199 CYP27B1O15528 508 aa17.76■□□□□ 0.43
GPN3-203ENST00000543199 COL23A1Q86Y22 540 aaPredicted RBP17.76■□□□□ 0.43
GPN3-203ENST00000543199 NLGN2Q8NFZ4 835 aa17.76■□□□□ 0.43
GPN3-203ENST00000543199 PALLDQ8WX93 1383 aa17.76■□□□□ 0.43
GPN3-203ENST00000543199 MSL1Q68DK7 614 aa17.75■□□□□ 0.43
GPN3-203ENST00000543199 C5P01031 1676 aa17.74■□□□□ 0.43
GPN3-203ENST00000543199 TOGARAM1Q9Y4F4 1720 aa17.73■□□□□ 0.43
GPN3-203ENST00000543199 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
GPN3-203ENST00000543199 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
GPN3-203ENST00000543199 PCGF6Q9BYE7 350 aa17.72■□□□□ 0.43
GPN3-203ENST00000543199 ANKRD26Q9UPS8 1709 aa17.71■□□□□ 0.42
GPN3-203ENST00000543199 NCAPD2Q15021 1401 aa17.71■□□□□ 0.42
GPN3-203ENST00000543199 TIMELESSQ9UNS1 1208 aa17.7■□□□□ 0.42
GPN3-203ENST00000543199 ITGB4P16144 1822 aa17.7■□□□□ 0.42
GPN3-203ENST00000543199 WASHC2AQ641Q2 1341 aa17.7■□□□□ 0.42
GPN3-203ENST00000543199 TAF1LQ8IZX4 1826 aa17.69■□□□□ 0.42
GPN3-203ENST00000543199 PIGBQ92521 554 aa17.69■□□□□ 0.42
GPN3-203ENST00000543199 EYA1Q99502 592 aa17.69■□□□□ 0.42
GPN3-203ENST00000543199 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
GPN3-203ENST00000543199 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
GPN3-203ENST00000543199 SMARCC1Q92922 1105 aaPredicted RBP17.69■□□□□ 0.42
GPN3-203ENST00000543199 C4BP0C0L5 1744 aa17.68■□□□□ 0.42
GPN3-203ENST00000543199 YBX3P16989 372 aaKnown RBP eCLIP17.68■□□□□ 0.423e-7■■■■□ 24.6
GPN3-203ENST00000543199 FLAD1Q8NFF5 587 aa17.68■□□□□ 0.42
GPN3-203ENST00000543199 AK7Q96M32 723 aa17.68■□□□□ 0.42
GPN3-203ENST00000543199 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
GPN3-203ENST00000543199 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
GPN3-203ENST00000543199 PHF14O94880 888 aa17.67■□□□□ 0.42
GPN3-203ENST00000543199 NKX1-1Q15270 411 aaPredicted RBP17.67■□□□□ 0.42
GPN3-203ENST00000543199 AMIGO3Q86WK7 504 aa17.67■□□□□ 0.42
GPN3-203ENST00000543199 HMGB2P26583 209 aaKnown RBP17.66■□□□□ 0.42
GPN3-203ENST00000543199 SMIM5Q71RC9 77 aa17.66■□□□□ 0.42
GPN3-203ENST00000543199 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
GPN3-203ENST00000543199 TMOD3Q9NYL9 352 aa17.65■□□□□ 0.42
GPN3-203ENST00000543199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.64■□□□□ 0.41
GPN3-203ENST00000543199 LOC102724428A0A0B4J2F2 783 aa17.64■□□□□ 0.41
GPN3-203ENST00000543199 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
GPN3-203ENST00000543199 SIK1P57059 783 aa17.64■□□□□ 0.41
GPN3-203ENST00000543199 C1QTNF8P60827 252 aa17.64■□□□□ 0.41
GPN3-203ENST00000543199 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
GPN3-203ENST00000543199 CLSPNQ9HAW4 1339 aa17.64■□□□□ 0.41
GPN3-203ENST00000543199 GRIN3BO60391 1043 aa17.63■□□□□ 0.41
GPN3-203ENST00000543199 PHKG2P15735 406 aa17.63■□□□□ 0.41
GPN3-203ENST00000543199 IFNL2Q8IZJ0 200 aa17.63■□□□□ 0.41
GPN3-203ENST00000543199 LINC00116Q8NCU8 138 aa17.63■□□□□ 0.41
GPN3-203ENST00000543199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.63■□□□□ 0.414e-6■■■□□ 17.2
GPN3-203ENST00000543199 ASAP1Q9ULH1 1129 aa17.63■□□□□ 0.41
GPN3-203ENST00000543199 UBR3Q6ZT12 1888 aa17.62■□□□□ 0.41
GPN3-203ENST00000543199 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
GPN3-203ENST00000543199 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
GPN3-203ENST00000543199 GIGYF1O75420 1035 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms