RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 USHBP1Q8N6Y0 703 aa23.97■■□□□ 1.43
LTBR-210ENST00000542830 ANKRD26Q9UPS8 1709 aa23.97■■□□□ 1.43
LTBR-210ENST00000542830 TXNRD1Q16881 649 aa23.96■■□□□ 1.43
LTBR-210ENST00000542830 PROM2Q8N271 834 aa23.96■■□□□ 1.43
LTBR-210ENST00000542830 KAT6BQ8WYB5 2073 aa23.96■■□□□ 1.43
LTBR-210ENST00000542830 POLKQ9UBT6 870 aa23.95■■□□□ 1.42
LTBR-210ENST00000542830 MAP2P11137 1827 aaKnown RBP23.95■■□□□ 1.42
LTBR-210ENST00000542830 KIF7Q2M1P5 1343 aa23.93■■□□□ 1.42
LTBR-210ENST00000542830 KNSTRNQ9Y448 316 aa23.93■■□□□ 1.42
LTBR-210ENST00000542830 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
LTBR-210ENST00000542830 SHANK3Q9BYB0 1731 aa23.9■■□□□ 1.42
LTBR-210ENST00000542830 BTAF1O14981 1849 aa23.9■■□□□ 1.42
LTBR-210ENST00000542830 ANO8Q9HCE9 1232 aaPredicted RBP23.9■■□□□ 1.42
LTBR-210ENST00000542830 NCAPD2Q15021 1401 aa23.9■■□□□ 1.42
LTBR-210ENST00000542830 PCDH11XQ9BZA7 1347 aa23.89■■□□□ 1.42
LTBR-210ENST00000542830 PCDH11YQ9BZA8 1340 aa23.89■■□□□ 1.42
LTBR-210ENST00000542830 MORC1Q86VD1 984 aa23.89■■□□□ 1.41
LTBR-210ENST00000542830 STK32BQ9NY57 414 aa23.89■■□□□ 1.41
LTBR-210ENST00000542830 PRIM1P49642 420 aaKnown RBP23.88■■□□□ 1.41
LTBR-210ENST00000542830 SYTL4Q96C24 671 aaPredicted RBP23.88■■□□□ 1.41
LTBR-210ENST00000542830 EYA1Q99502 592 aa23.86■■□□□ 1.41
LTBR-210ENST00000542830 DOT1LQ8TEK3 1739 aa23.85■■□□□ 1.41
LTBR-210ENST00000542830 EIF4A2Q14240 407 aaKnown RBP23.85■■□□□ 1.41
LTBR-210ENST00000542830 SLC15A2Q16348 729 aa23.84■■□□□ 1.41
LTBR-210ENST00000542830 SLC27A3Q5K4L6 730 aa23.84■■□□□ 1.41
LTBR-210ENST00000542830 SPON1Q9HCB6 807 aa23.84■■□□□ 1.41
LTBR-210ENST00000542830 AMER1Q5JTC6 1135 aaPredicted RBP23.83■■□□□ 1.41
LTBR-210ENST00000542830 SPG7Q9UQ90 795 aa23.83■■□□□ 1.41
LTBR-210ENST00000542830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.82■■□□□ 1.4
LTBR-210ENST00000542830 PLEKHG2Q9H7P9 1386 aa23.81■■□□□ 1.4
LTBR-210ENST00000542830 CYP27B1O15528 508 aa23.81■■□□□ 1.4
LTBR-210ENST00000542830 PKD1L3Q7Z443 1732 aa23.81■■□□□ 1.4
LTBR-210ENST00000542830 LRRC4BQ9NT99 713 aa23.79■■□□□ 1.4
LTBR-210ENST00000542830 PAPPAQ13219 1627 aa23.79■■□□□ 1.4
LTBR-210ENST00000542830 IGSF1Q8N6C5 1336 aa23.79■■□□□ 1.4
LTBR-210ENST00000542830 CASZ1Q86V15 1759 aa23.78■■□□□ 1.4
LTBR-210ENST00000542830 PER1O15534 1290 aaPredicted RBP23.77■■□□□ 1.4
LTBR-210ENST00000542830 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
LTBR-210ENST00000542830 HMGB2P26583 209 aaKnown RBP23.75■■□□□ 1.39
LTBR-210ENST00000542830 PPP1R1BQ9UD71 204 aaPredicted RBP23.75■■□□□ 1.39
LTBR-210ENST00000542830 IFNL2Q8IZJ0 200 aa23.74■■□□□ 1.39
LTBR-210ENST00000542830 PDGFDQ9GZP0 370 aaPredicted RBP23.74■■□□□ 1.39
LTBR-210ENST00000542830 LY75O60449 1722 aa23.73■■□□□ 1.39
LTBR-210ENST00000542830 ZNF827Q17R98 1081 aa23.73■■□□□ 1.39
LTBR-210ENST00000542830 MPRIPQ6WCQ1 1025 aa23.73■■□□□ 1.39
LTBR-210ENST00000542830 CCNL1Q9UK58 526 aaPredicted RBP23.73■■□□□ 1.39
LTBR-210ENST00000542830 ZBTB7AO95365 584 aa23.72■■□□□ 1.39
LTBR-210ENST00000542830 AKT1S1Q96B36 256 aa23.72■■□□□ 1.39
LTBR-210ENST00000542830 NPC1L1Q9UHC9 1359 aa23.72■■□□□ 1.39
LTBR-210ENST00000542830 PHKG2P15735 406 aa23.71■■□□□ 1.39
LTBR-210ENST00000542830 SMARCC1Q92922 1105 aaPredicted RBP23.71■■□□□ 1.39
LTBR-210ENST00000542830 MTFR1LQ9H019 292 aa23.71■■□□□ 1.39
LTBR-210ENST00000542830 PLEKHO1Q53GL0 409 aaPredicted RBP23.7■■□□□ 1.38
LTBR-210ENST00000542830 CC2D1BQ5T0F9 858 aaKnown RBP23.7■■□□□ 1.38
LTBR-210ENST00000542830 AMOTQ4VCS5 1084 aa23.69■■□□□ 1.38
LTBR-210ENST00000542830 TOGARAM1Q9Y4F4 1720 aa23.69■■□□□ 1.38
LTBR-210ENST00000542830 PALLDQ8WX93 1383 aa23.68■■□□□ 1.38
LTBR-210ENST00000542830 IL13P35225 146 aa23.68■■□□□ 1.38
LTBR-210ENST00000542830 MTHFSP49914 203 aa23.68■■□□□ 1.38
LTBR-210ENST00000542830 KCNQ4P56696 695 aa23.68■■□□□ 1.38
LTBR-210ENST00000542830 HSP90AB1P08238 724 aaKnown RBP23.67■■□□□ 1.38
LTBR-210ENST00000542830 TFCP2L1Q9NZI6 479 aa23.67■■□□□ 1.38
LTBR-210ENST00000542830 ATF5Q9Y2D1 282 aaPredicted RBP23.67■■□□□ 1.38
LTBR-210ENST00000542830 ITGB4P16144 1822 aa23.66■■□□□ 1.38
LTBR-210ENST00000542830 PTGER2P43116 358 aa23.66■■□□□ 1.38
LTBR-210ENST00000542830 SLC16A10Q8TF71 515 aa23.66■■□□□ 1.38
LTBR-210ENST00000542830 PIGBQ92521 554 aa23.66■■□□□ 1.38
LTBR-210ENST00000542830 TMOD3Q9NYL9 352 aa23.66■■□□□ 1.38
LTBR-210ENST00000542830 KDRP35968 1356 aa23.65■■□□□ 1.38
LTBR-210ENST00000542830 QSER1Q2KHR3 1735 aa23.65■■□□□ 1.38
LTBR-210ENST00000542830 SULT6B1Q6IMI4 303 aa23.65■■□□□ 1.38
LTBR-210ENST00000542830 AEBP1Q8IUX7 1158 aa23.64■■□□□ 1.37
LTBR-210ENST00000542830 PNPLA7Q6ZV29 1317 aa23.63■■□□□ 1.37
LTBR-210ENST00000542830 ZNF530Q6P9A1 599 aaPredicted RBP23.63■■□□□ 1.37
LTBR-210ENST00000542830 DCAF5Q96JK2 942 aa23.63■■□□□ 1.37
LTBR-210ENST00000542830 ERVV-2B6SEH9 535 aa23.61■■□□□ 1.37
LTBR-210ENST00000542830 C1orf141Q5JVX7 400 aa23.61■■□□□ 1.37
LTBR-210ENST00000542830 SGIP1Q9BQI5 828 aa23.61■■□□□ 1.37
LTBR-210ENST00000542830 DIAPH1O60610 1272 aaKnown RBP23.6■■□□□ 1.37
LTBR-210ENST00000542830 C5P01031 1676 aa23.58■■□□□ 1.37
LTBR-210ENST00000542830 TUBGCP6Q96RT7 1819 aa23.57■■□□□ 1.36
LTBR-210ENST00000542830 LOC102724428A0A0B4J2F2 783 aa23.57■■□□□ 1.36
LTBR-210ENST00000542830 SIK1P57059 783 aa23.57■■□□□ 1.36
LTBR-210ENST00000542830 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
LTBR-210ENST00000542830 ASAP1Q9ULH1 1129 aa23.57■■□□□ 1.36
LTBR-210ENST00000542830 DCAF8L1A6NGE4 600 aa23.56■■□□□ 1.36
LTBR-210ENST00000542830 POLD1P28340 1107 aa23.56■■□□□ 1.36
LTBR-210ENST00000542830 FLAD1Q8NFF5 587 aa23.56■■□□□ 1.36
LTBR-210ENST00000542830 ARXQ96QS3 562 aa23.56■■□□□ 1.36
LTBR-210ENST00000542830 TAF1LQ8IZX4 1826 aa23.55■■□□□ 1.36
LTBR-210ENST00000542830 ATG3Q9NT62 314 aa23.55■■□□□ 1.36
LTBR-210ENST00000542830 KDM6AO15550 1401 aaPredicted RBP23.55■■□□□ 1.36
LTBR-210ENST00000542830 MSH5O43196 834 aa23.54■■□□□ 1.36
LTBR-210ENST00000542830 CABP4P57796 275 aa23.54■■□□□ 1.36
LTBR-210ENST00000542830 AK7Q96M32 723 aa23.54■■□□□ 1.36
LTBR-210ENST00000542830 HMOX1P09601 288 aa23.53■■□□□ 1.36
LTBR-210ENST00000542830 AKAP4Q5JQC9 854 aa23.53■■□□□ 1.36
LTBR-210ENST00000542830 COL23A1Q86Y22 540 aaPredicted RBP23.53■■□□□ 1.36
LTBR-210ENST00000542830 FHDC1Q9C0D6 1143 aaPredicted RBP23.52■■□□□ 1.36
LTBR-210ENST00000542830 C4BP0C0L5 1744 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms