RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 MEN1O00255 615 aa10.63□□□□□ -0.71
XRCC4-206ENST00000542685 VSIG8P0DPA2 414 aa10.62□□□□□ -0.71
XRCC4-206ENST00000542685 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
XRCC4-206ENST00000542685 A0A1W2PRU2 124 aa10.61□□□□□ -0.71
XRCC4-206ENST00000542685 CCDC85AQ96PX6 553 aaPredicted RBP10.61□□□□□ -0.71
XRCC4-206ENST00000542685 LYSMD3Q7Z3D4 306 aa10.6□□□□□ -0.71
XRCC4-206ENST00000542685 PRICKLE2Q7Z3G6 844 aa10.6□□□□□ -0.71
XRCC4-206ENST00000542685 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
XRCC4-206ENST00000542685 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
XRCC4-206ENST00000542685 SLC35F4A4IF30 521 aa10.59□□□□□ -0.71
XRCC4-206ENST00000542685 OSBPL3Q9H4L5 887 aa10.59□□□□□ -0.71
XRCC4-206ENST00000542685 RNF144AP50876 292 aaPredicted RBP10.58□□□□□ -0.72
XRCC4-206ENST00000542685 SLFNL1Q499Z3 407 aa10.58□□□□□ -0.72
XRCC4-206ENST00000542685 NLRP3Q96P20 1036 aa10.58□□□□□ -0.72
XRCC4-206ENST00000542685 TRAK2O60296 914 aa10.57□□□□□ -0.72
XRCC4-206ENST00000542685 WASHC4Q2M389 1173 aa10.57□□□□□ -0.72
XRCC4-206ENST00000542685 TSGA10IPQ3SY00 556 aa10.57□□□□□ -0.72
XRCC4-206ENST00000542685 ARHGEF10LQ9HCE6 1279 aa10.57□□□□□ -0.72
XRCC4-206ENST00000542685 STK17AQ9UEE5 414 aa10.57□□□□□ -0.72
XRCC4-206ENST00000542685 COG6Q9Y2V7 657 aa10.57□□□□□ -0.72
XRCC4-206ENST00000542685 SENP3-EIF4A1A0A087X0R7 540 aa10.56□□□□□ -0.72
XRCC4-206ENST00000542685 MYCP01106 439 aaPredicted RBP10.56□□□□□ -0.72
XRCC4-206ENST00000542685 RHOQP17081 205 aa10.56□□□□□ -0.72
XRCC4-206ENST00000542685 ITGA6P23229 1130 aa10.56□□□□□ -0.72
XRCC4-206ENST00000542685 RNF135Q8IUD6 432 aa10.56□□□□□ -0.72
XRCC4-206ENST00000542685 RAB6BQ9NRW1 208 aa10.56□□□□□ -0.72
XRCC4-206ENST00000542685 SLC27A3Q5K4L6 730 aa10.55□□□□□ -0.72
XRCC4-206ENST00000542685 PHTF2Q8N3S3 785 aa10.55□□□□□ -0.72
XRCC4-206ENST00000542685 GPR161Q8N6U8 529 aaKnown RBP10.55□□□□□ -0.72
XRCC4-206ENST00000542685 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
XRCC4-206ENST00000542685 DOLKQ9UPQ8 538 aa10.55□□□□□ -0.72
XRCC4-206ENST00000542685 CDC14CA4D256 554 aa10.54□□□□□ -0.72
XRCC4-206ENST00000542685 GPC1P35052 558 aa10.54□□□□□ -0.72
XRCC4-206ENST00000542685 SEMA3FQ13275 785 aa10.54□□□□□ -0.72
XRCC4-206ENST00000542685 CLN3Q13286 438 aa10.54□□□□□ -0.72
XRCC4-206ENST00000542685 VWA5B2Q8N398 1253 aa10.53□□□□□ -0.72
XRCC4-206ENST00000542685 POM121Q96HA1 1249 aa10.53□□□□□ -0.72
XRCC4-206ENST00000542685 GNRH1P01148 92 aa10.52□□□□□ -0.73
XRCC4-206ENST00000542685 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
XRCC4-206ENST00000542685 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
XRCC4-206ENST00000542685 NANOS1Q8WY41 292 aaKnown RBP10.52□□□□□ -0.73
XRCC4-206ENST00000542685 POU4F2Q12837 409 aa10.51□□□□□ -0.73
XRCC4-206ENST00000542685 USP4Q13107 963 aa10.51□□□□□ -0.73
XRCC4-206ENST00000542685 CNKSR1Q969H4 720 aa10.51□□□□□ -0.73
XRCC4-206ENST00000542685 SV2AQ7L0J3 742 aa10.5□□□□□ -0.73
XRCC4-206ENST00000542685 CNTNAP3BQ96NU0 1288 aa10.5□□□□□ -0.73
XRCC4-206ENST00000542685 COL25A1Q9BXS0 654 aaPredicted RBP10.5□□□□□ -0.73
XRCC4-206ENST00000542685 CNTNAP3Q9BZ76 1288 aa10.5□□□□□ -0.73
XRCC4-206ENST00000542685 GRIP2Q9C0E4 1043 aa10.5□□□□□ -0.73
XRCC4-206ENST00000542685 RAD21O60216 631 aa10.49□□□□□ -0.73
XRCC4-206ENST00000542685 IL2RAP01589 272 aa10.49□□□□□ -0.73
XRCC4-206ENST00000542685 SOX11P35716 441 aa10.49□□□□□ -0.73
XRCC4-206ENST00000542685 KRT76Q01546 638 aa10.49□□□□□ -0.73
XRCC4-206ENST00000542685 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
XRCC4-206ENST00000542685 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
XRCC4-206ENST00000542685 UBTFP17480 764 aaKnown RBP10.48□□□□□ -0.73
XRCC4-206ENST00000542685 FLIIQ13045 1269 aa10.48□□□□□ -0.73
XRCC4-206ENST00000542685 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
XRCC4-206ENST00000542685 CUEDC1Q9NWM3 386 aaPredicted RBP10.48□□□□□ -0.73
XRCC4-206ENST00000542685 CHIC2Q9UKJ5 165 aa10.48□□□□□ -0.73
XRCC4-206ENST00000542685 STAU1O95793 577 aaKnown RBP10.47□□□□□ -0.73
XRCC4-206ENST00000542685 CENPCQ03188 943 aa10.47□□□□□ -0.73
XRCC4-206ENST00000542685 TMEM132AQ24JP5 1023 aa10.47□□□□□ -0.73
XRCC4-206ENST00000542685 NBPF10Q6P3W6 841 aaKnown RBP10.47□□□□□ -0.73
XRCC4-206ENST00000542685 RIPOR1Q6ZS17 1223 aa10.47□□□□□ -0.73
XRCC4-206ENST00000542685 NBPF15Q8N660 670 aa10.47□□□□□ -0.73
XRCC4-206ENST00000542685 PLPP7Q8NBV4 271 aa10.47□□□□□ -0.73
XRCC4-206ENST00000542685 RNFT1Q5M7Z0 435 aa10.46□□□□□ -0.73
XRCC4-206ENST00000542685 GAS2L1Q99501 681 aaPredicted RBP10.46□□□□□ -0.73
XRCC4-206ENST00000542685 NISCHQ9Y2I1 1504 aa10.46□□□□□ -0.74
XRCC4-206ENST00000542685 SIRT1Q96EB6 747 aa10.45□□□□□ -0.74
XRCC4-206ENST00000542685 XAGE2Q96GT9 111 aa10.45□□□□□ -0.74
XRCC4-206ENST00000542685 PIK3CDO00329 1044 aa10.44□□□□□ -0.74
XRCC4-206ENST00000542685 WASLO00401 505 aaPredicted RBP10.44□□□□□ -0.74
XRCC4-206ENST00000542685 MAP7D1Q3KQU3 841 aa10.44□□□□□ -0.74
XRCC4-206ENST00000542685 ESCO1Q5FWF5 840 aa10.44□□□□□ -0.74
XRCC4-206ENST00000542685 TAS1R3Q7RTX0 852 aa10.44□□□□□ -0.74
XRCC4-206ENST00000542685 DYRK1BQ9Y463 629 aa10.44□□□□□ -0.74
XRCC4-206ENST00000542685 SPATA31C2B4DYI2 1134 aa10.43□□□□□ -0.74
XRCC4-206ENST00000542685 ZSCAN10Q96SZ4 725 aaPredicted RBP10.43□□□□□ -0.74
XRCC4-206ENST00000542685 ALG2Q9H553 416 aa10.43□□□□□ -0.74
XRCC4-206ENST00000542685 ETNK1Q9HBU6 452 aa10.43□□□□□ -0.74
XRCC4-206ENST00000542685 TIMMDC1Q9NPL8 285 aa10.43□□□□□ -0.74
XRCC4-206ENST00000542685 GTF2E1P29083 439 aaPredicted RBP10.42□□□□□ -0.74
XRCC4-206ENST00000542685 PHKA2P46019 1235 aa10.42□□□□□ -0.74
XRCC4-206ENST00000542685 TMEM214Q6NUQ4 689 aaKnown RBP10.42□□□□□ -0.74
XRCC4-206ENST00000542685 TRIM22Q8IYM9 498 aa10.42□□□□□ -0.74
XRCC4-206ENST00000542685 HRH3Q9Y5N1 445 aa10.42□□□□□ -0.74
XRCC4-206ENST00000542685 DBN1Q16643 649 aa10.41□□□□□ -0.74
XRCC4-206ENST00000542685 WDR44Q5JSH3 913 aa10.41□□□□□ -0.74
XRCC4-206ENST00000542685 ZNF837Q96EG3 531 aaPredicted RBP10.41□□□□□ -0.74
XRCC4-206ENST00000542685 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
XRCC4-206ENST00000542685 POM121CA8CG34 1229 aa10.4□□□□□ -0.74
XRCC4-206ENST00000542685 SKIP12755 728 aa10.4□□□□□ -0.74
XRCC4-206ENST00000542685 GPR25O00155 361 aa10.39□□□□□ -0.75
XRCC4-206ENST00000542685 GDF10P55107 478 aa10.39□□□□□ -0.75
XRCC4-206ENST00000542685 TLR1Q15399 786 aa10.39□□□□□ -0.75
XRCC4-206ENST00000542685 GNASQ5JWF2 1037 aa10.39□□□□□ -0.75
XRCC4-206ENST00000542685 H7C1W4 665 aa10.38□□□□□ -0.75
XRCC4-206ENST00000542685 SCNN1DP51172 638 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms