RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 FAM98CQ17RN3 349 aaKnown RBP30.59■■■□□ 2.49
HOMER3-205ENST00000542541 AMOTQ4VCS5 1084 aa30.59■■■□□ 2.49
HOMER3-205ENST00000542541 PLEKHO1Q53GL0 409 aaPredicted RBP30.59■■■□□ 2.49
HOMER3-205ENST00000542541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.59■■■□□ 2.49
HOMER3-205ENST00000542541 CCDC146Q8IYE0 955 aa30.58■■■□□ 2.49
HOMER3-205ENST00000542541 SPG7Q9UQ90 795 aa30.57■■■□□ 2.48
HOMER3-205ENST00000542541 DISP2A7MBM2 1401 aa30.57■■■□□ 2.48
HOMER3-205ENST00000542541 MEGF6O75095 1541 aa30.56■■■□□ 2.48
HOMER3-205ENST00000542541 ONECUT3O60422 494 aaPredicted RBP30.56■■■□□ 2.48
HOMER3-205ENST00000542541 RXRBP28702 533 aa30.55■■■□□ 2.48
HOMER3-205ENST00000542541 PHACTR3Q96KR7 559 aa30.55■■■□□ 2.48
HOMER3-205ENST00000542541 OVOS2A0A0G2JMS6 1433 aa30.55■■■□□ 2.48
HOMER3-205ENST00000542541 EXOC5O00471 708 aa30.55■■■□□ 2.48
HOMER3-205ENST00000542541 ZCRB1Q8TBF4 217 aaKnown RBP30.55■■■□□ 2.48
HOMER3-205ENST00000542541 WNK3Q9BYP7 1800 aa30.54■■■□□ 2.48
HOMER3-205ENST00000542541 A0A0G2JS52 829 aa30.53■■■□□ 2.48
HOMER3-205ENST00000542541 MYT1Q01538 1121 aa30.53■■■□□ 2.48
HOMER3-205ENST00000542541 GAS2L2Q8NHY3 880 aa30.53■■■□□ 2.48
HOMER3-205ENST00000542541 DDB1Q16531 1140 aa30.51■■■□□ 2.48
HOMER3-205ENST00000542541 PARP4Q9UKK3 1724 aaKnown RBP30.5■■■□□ 2.47
HOMER3-205ENST00000542541 MTHFSDQ2M296 383 aaKnown RBP30.5■■■□□ 2.47
HOMER3-205ENST00000542541 APAF1O14727 1248 aa30.48■■■□□ 2.47
HOMER3-205ENST00000542541 NFE2L2Q16236 605 aa30.47■■■□□ 2.47
HOMER3-205ENST00000542541 ZNF530Q6P9A1 599 aaPredicted RBP30.47■■■□□ 2.47
HOMER3-205ENST00000542541 SEPT12Q8IYM1 358 aa30.47■■■□□ 2.47
HOMER3-205ENST00000542541 PCDH11XQ9BZA7 1347 aa30.47■■■□□ 2.47
HOMER3-205ENST00000542541 PCDH11YQ9BZA8 1340 aa30.47■■■□□ 2.47
HOMER3-205ENST00000542541 THSD7AQ9UPZ6 1657 aa30.47■■■□□ 2.47
HOMER3-205ENST00000542541 TMPOP42166 694 aaKnown RBP30.46■■■□□ 2.47
HOMER3-205ENST00000542541 C1orf141Q5JVX7 400 aa30.46■■■□□ 2.47
HOMER3-205ENST00000542541 IFNL2Q8IZJ0 200 aa30.45■■■□□ 2.47
HOMER3-205ENST00000542541 TNS2Q63HR2 1409 aa30.44■■■□□ 2.46
HOMER3-205ENST00000542541 PDE3BQ13370 1112 aa30.44■■■□□ 2.46
HOMER3-205ENST00000542541 NGEFQ8N5V2 710 aa30.44■■■□□ 2.46
HOMER3-205ENST00000542541 DDX54Q8TDD1 881 aaKnown RBP30.44■■■□□ 2.46
HOMER3-205ENST00000542541 BRWD3Q6RI45 1802 aa30.43■■■□□ 2.46
HOMER3-205ENST00000542541 AKAP4Q5JQC9 854 aa30.43■■■□□ 2.46
HOMER3-205ENST00000542541 RGS12O14924 1447 aa30.43■■■□□ 2.46
HOMER3-205ENST00000542541 RIPK4P57078 832 aa30.42■■■□□ 2.46
HOMER3-205ENST00000542541 NEUROD2Q15784 382 aa30.41■■■□□ 2.46
HOMER3-205ENST00000542541 NCBP3Q53F19 620 aaKnown RBP30.41■■■□□ 2.46
HOMER3-205ENST00000542541 PKD1L3Q7Z443 1732 aa30.41■■■□□ 2.46
HOMER3-205ENST00000542541 GNAT3A8MTJ3 354 aa30.4■■■□□ 2.46
HOMER3-205ENST00000542541 CYP27B1O15528 508 aa30.4■■■□□ 2.46
HOMER3-205ENST00000542541 HSP90AB1P08238 724 aaKnown RBP30.4■■■□□ 2.46
HOMER3-205ENST00000542541 PHKG2P15735 406 aa30.4■■■□□ 2.46
HOMER3-205ENST00000542541 RRP7AQ9Y3A4 280 aaKnown RBP30.4■■■□□ 2.46
HOMER3-205ENST00000542541 HTATSF1O43719 755 aaKnown RBP30.4■■■□□ 2.46
HOMER3-205ENST00000542541 LMOD3Q0VAK6 560 aa30.4■■■□□ 2.46
HOMER3-205ENST00000542541 RTF1Q92541 710 aaKnown RBP30.39■■■□□ 2.46
HOMER3-205ENST00000542541 MAP3K5Q99683 1374 aa30.38■■■□□ 2.45
HOMER3-205ENST00000542541 LRRC37A3O60309 1634 aa30.37■■■□□ 2.45
HOMER3-205ENST00000542541 HNRNPUQ00839 825 aaKnown RBP eCLIP30.35■■■□□ 2.45
HOMER3-205ENST00000542541 NKX1-1Q15270 411 aaPredicted RBP30.35■■■□□ 2.45
HOMER3-205ENST00000542541 ILDR2Q71H61 639 aa30.35■■■□□ 2.45
HOMER3-205ENST00000542541 MARCH10Q8NA82 808 aaPredicted RBP30.35■■■□□ 2.45
HOMER3-205ENST00000542541 DCAF5Q96JK2 942 aa30.34■■■□□ 2.45
HOMER3-205ENST00000542541 CCDC27Q2M243 656 aa30.33■■■□□ 2.45
HOMER3-205ENST00000542541 KRT27Q7Z3Y8 459 aa30.33■■■□□ 2.45
HOMER3-205ENST00000542541 SENP3-EIF4A1A0A087X0R7 540 aa30.33■■■□□ 2.45
HOMER3-205ENST00000542541 MPRIPQ6WCQ1 1025 aa30.32■■■□□ 2.44
HOMER3-205ENST00000542541 SALL2Q9Y467 1007 aaPredicted RBP30.32■■■□□ 2.44
HOMER3-205ENST00000542541 TRIM35Q9UPQ4 493 aa30.3■■■□□ 2.44
HOMER3-205ENST00000542541 SHANK3Q9BYB0 1731 aa30.3■■■□□ 2.44
HOMER3-205ENST00000542541 RNMTO43148 476 aaKnown RBP30.28■■■□□ 2.44
HOMER3-205ENST00000542541 IL17REQ8NFR9 667 aa30.28■■■□□ 2.44
HOMER3-205ENST00000542541 MCM10Q7L590 875 aa30.27■■■□□ 2.44
HOMER3-205ENST00000542541 WWC1Q8IX03 1113 aa30.27■■■□□ 2.44
HOMER3-205ENST00000542541 CALD1Q05682 793 aaKnown RBP30.26■■■□□ 2.44
HOMER3-205ENST00000542541 LGR6Q9HBX8 967 aa30.26■■■□□ 2.44
HOMER3-205ENST00000542541 DCTN1Q14203 1278 aa30.25■■■□□ 2.43
HOMER3-205ENST00000542541 ERVV-2B6SEH9 535 aa30.25■■■□□ 2.43
HOMER3-205ENST00000542541 EP400Q96L91 3159 aa30.24■■■□□ 2.43
HOMER3-205ENST00000542541 FAM196AQ6ZSG2 479 aa30.24■■■□□ 2.43
HOMER3-205ENST00000542541 CEMIPQ8WUJ3 1361 aa30.24■■■□□ 2.43
HOMER3-205ENST00000542541 TEFQ10587 303 aa30.23■■■□□ 2.43
HOMER3-205ENST00000542541 BCL9O00512 1426 aa30.23■■■□□ 2.43
HOMER3-205ENST00000542541 KDM6AO15550 1401 aaPredicted RBP30.23■■■□□ 2.43
HOMER3-205ENST00000542541 DLG5Q8TDM6 1919 aa30.22■■■□□ 2.43
HOMER3-205ENST00000542541 WDR63Q8IWG1 891 aa30.22■■■□□ 2.43
HOMER3-205ENST00000542541 YTHDC1Q96MU7 727 aaKnown RBP30.22■■■□□ 2.43
HOMER3-205ENST00000542541 CABP4P57796 275 aa30.21■■■□□ 2.43
HOMER3-205ENST00000542541 FAM182BQ5T319 152 aa30.21■■■□□ 2.43
HOMER3-205ENST00000542541 THUMPD2Q9BTF0 503 aaKnown RBP30.21■■■□□ 2.43
HOMER3-205ENST00000542541 ZBED9Q6R2W3 1325 aa30.19■■■□□ 2.42
HOMER3-205ENST00000542541 SLC52A2Q9HAB3 445 aa30.19■■■□□ 2.42
HOMER3-205ENST00000542541 ZNF521Q96K83 1311 aa30.18■■■□□ 2.42
HOMER3-205ENST00000542541 TAF7Q15545 349 aaPredicted RBP30.17■■■□□ 2.42
HOMER3-205ENST00000542541 NFATC2IPQ8NCF5 419 aa30.17■■■□□ 2.42
HOMER3-205ENST00000542541 ADAMTS7Q9UKP4 1686 aa30.16■■■□□ 2.42
HOMER3-205ENST00000542541 PRIM1P49642 420 aaKnown RBP30.16■■■□□ 2.42
HOMER3-205ENST00000542541 SYTL4Q96C24 671 aaPredicted RBP30.16■■■□□ 2.42
HOMER3-205ENST00000542541 TMOD3Q9NYL9 352 aa30.16■■■□□ 2.42
HOMER3-205ENST00000542541 IL16Q14005 1332 aa30.16■■■□□ 2.42
HOMER3-205ENST00000542541 ACSBG1Q96GR2 724 aa30.15■■■□□ 2.42
HOMER3-205ENST00000542541 SCN11AQ9UI33 1791 aa30.14■■■□□ 2.42
HOMER3-205ENST00000542541 GOLGA2Q08379 1002 aa30.14■■■□□ 2.41
HOMER3-205ENST00000542541 GNAI1P63096 354 aa30.13■■■□□ 2.41
HOMER3-205ENST00000542541 BABAM1Q9NWV8 329 aa30.13■■■□□ 2.41
HOMER3-205ENST00000542541 CFAP44Q96MT7 982 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms