RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
CNOT9-208ENST00000542068 TSPYL4Q9UJ04 414 aa18.86■□□□□ 0.61
CNOT9-208ENST00000542068 NCOA3Q9Y6Q9 1424 aa18.86■□□□□ 0.61
CNOT9-208ENST00000542068 RBM10P98175 930 aaKnown RBP18.85■□□□□ 0.61
CNOT9-208ENST00000542068 MPNDQ8N594 471 aa18.85■□□□□ 0.61
CNOT9-208ENST00000542068 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
CNOT9-208ENST00000542068 API5Q9BZZ5 524 aaKnown RBP18.85■□□□□ 0.61
CNOT9-208ENST00000542068 MSNP26038 577 aaKnown RBP18.85■□□□□ 0.61
CNOT9-208ENST00000542068 KIAA1211Q6ZU35 1233 aa18.85■□□□□ 0.61
CNOT9-208ENST00000542068 RNF214Q8ND24 703 aa18.85■□□□□ 0.61
CNOT9-208ENST00000542068 ADGRB2O60241 1585 aa18.84■□□□□ 0.61
CNOT9-208ENST00000542068 GLIPR1L2Q4G1C9 344 aa18.84■□□□□ 0.61
CNOT9-208ENST00000542068 CHMP4BQ9H444 224 aaKnown RBP18.84■□□□□ 0.61
CNOT9-208ENST00000542068 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
CNOT9-208ENST00000542068 TTC21BQ7Z4L5 1316 aa18.84■□□□□ 0.61
CNOT9-208ENST00000542068 SDSP20132 328 aa18.84■□□□□ 0.61
CNOT9-208ENST00000542068 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
CNOT9-208ENST00000542068 USHBP1Q8N6Y0 703 aa18.84■□□□□ 0.61
CNOT9-208ENST00000542068 COL3A1P02461 1466 aaPredicted RBP18.83■□□□□ 0.6
CNOT9-208ENST00000542068 TTC22Q5TAA0 569 aa18.83■□□□□ 0.6
CNOT9-208ENST00000542068 ZFYVE9O95405 1425 aa18.82■□□□□ 0.6
CNOT9-208ENST00000542068 A2ML1A8K2U0 1454 aa18.82■□□□□ 0.6
CNOT9-208ENST00000542068 RABEP1Q15276 862 aa18.82■□□□□ 0.6
CNOT9-208ENST00000542068 MEIS3Q99687 375 aa18.82■□□□□ 0.6
CNOT9-208ENST00000542068 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
CNOT9-208ENST00000542068 CCDC173Q0VFZ6 552 aa18.81■□□□□ 0.6
CNOT9-208ENST00000542068 KLHL40Q2TBA0 621 aa18.81■□□□□ 0.6
CNOT9-208ENST00000542068 USP26Q9BXU7 913 aa18.81■□□□□ 0.6
CNOT9-208ENST00000542068 ZSCAN23Q3MJ62 389 aa18.8■□□□□ 0.6
CNOT9-208ENST00000542068 INTS3Q68E01 1043 aaKnown RBP18.8■□□□□ 0.6
CNOT9-208ENST00000542068 RBSNQ9H1K0 784 aa18.8■□□□□ 0.6
CNOT9-208ENST00000542068 ABCC4O15439 1325 aa18.8■□□□□ 0.6
CNOT9-208ENST00000542068 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
CNOT9-208ENST00000542068 PRIM1P49642 420 aaKnown RBP18.8■□□□□ 0.6
CNOT9-208ENST00000542068 ISY1Q9ULR0 285 aaKnown RBP18.8■□□□□ 0.6
CNOT9-208ENST00000542068 R3HCC1Q9Y3T6 440 aaKnown RBP18.8■□□□□ 0.6
CNOT9-208ENST00000542068 TNRQ92752 1358 aa18.79■□□□□ 0.6
CNOT9-208ENST00000542068 ROBO2Q9HCK4 1378 aa18.79■□□□□ 0.6
CNOT9-208ENST00000542068 ARHGAP45Q92619 1136 aa18.79■□□□□ 0.6
CNOT9-208ENST00000542068 DCTPP1Q9H773 170 aa18.79■□□□□ 0.6
CNOT9-208ENST00000542068 EIF2S2P20042 333 aaKnown RBP18.79■□□□□ 0.6
CNOT9-208ENST00000542068 FKBP5Q13451 457 aaPredicted RBP18.79■□□□□ 0.6
CNOT9-208ENST00000542068 CASC1Q6TDU7 716 aa18.79■□□□□ 0.6
CNOT9-208ENST00000542068 PNPLA6Q8IY17 1366 aa18.79■□□□□ 0.6
CNOT9-208ENST00000542068 XPCQ01831 940 aaPredicted RBP18.78■□□□□ 0.6
CNOT9-208ENST00000542068 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
CNOT9-208ENST00000542068 G2E3Q7L622 706 aa18.78■□□□□ 0.6
CNOT9-208ENST00000542068 SYCE3A1L190 88 aa18.78■□□□□ 0.6
CNOT9-208ENST00000542068 ST18O60284 1047 aa18.78■□□□□ 0.6
CNOT9-208ENST00000542068 NEK4P51957 841 aa18.78■□□□□ 0.6
CNOT9-208ENST00000542068 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
CNOT9-208ENST00000542068 EXOC6BQ9Y2D4 811 aa18.78■□□□□ 0.6
CNOT9-208ENST00000542068 EDC4Q6P2E9 1401 aaKnown RBP18.78■□□□□ 0.6
CNOT9-208ENST00000542068 NUCB2P80303 420 aa18.77■□□□□ 0.6
CNOT9-208ENST00000542068 ZSCAN30Q86W11 494 aa18.77■□□□□ 0.6
CNOT9-208ENST00000542068 STK31Q9BXU1 1019 aa18.77■□□□□ 0.6
CNOT9-208ENST00000542068 LMBRD1Q9NUN5 540 aa18.77■□□□□ 0.6
CNOT9-208ENST00000542068 NSFL1CQ9UNZ2 370 aaKnown RBP18.77■□□□□ 0.6
CNOT9-208ENST00000542068 PREX1Q8TCU6 1659 aa18.77■□□□□ 0.6
CNOT9-208ENST00000542068 DTNBO60941 627 aa18.77■□□□□ 0.6
CNOT9-208ENST00000542068 PTMSP20962 102 aa18.77■□□□□ 0.6
CNOT9-208ENST00000542068 MTHFSDQ2M296 383 aaKnown RBP18.77■□□□□ 0.6
CNOT9-208ENST00000542068 FAM135BQ49AJ0 1406 aa18.77■□□□□ 0.6
CNOT9-208ENST00000542068 MAP3K19Q56UN5 1328 aa18.76■□□□□ 0.59
CNOT9-208ENST00000542068 CEP85Q6P2H3 762 aa18.76■□□□□ 0.59
CNOT9-208ENST00000542068 RILPL2Q969X0 211 aa18.76■□□□□ 0.59
CNOT9-208ENST00000542068 FAM13BQ9NYF5 915 aa18.76■□□□□ 0.59
CNOT9-208ENST00000542068 GDPD2Q9HCC8 539 aa18.75■□□□□ 0.59
CNOT9-208ENST00000542068 RRP9O43818 475 aaKnown RBP18.75■□□□□ 0.59
CNOT9-208ENST00000542068 ZMYND15Q9H091 742 aa18.75■□□□□ 0.59
CNOT9-208ENST00000542068 TRIM6-TRIM34B2RNG4 842 aa18.75■□□□□ 0.59
CNOT9-208ENST00000542068 ZNF853P0CG23 659 aa18.75■□□□□ 0.59
CNOT9-208ENST00000542068 GPT2Q8TD30 523 aa18.75■□□□□ 0.59
CNOT9-208ENST00000542068 PPP6R1Q9UPN7 881 aa18.74■□□□□ 0.59
CNOT9-208ENST00000542068 ANKRD44Q8N8A2 993 aa18.74■□□□□ 0.59
CNOT9-208ENST00000542068 USP32Q8NFA0 1604 aa18.74■□□□□ 0.59
CNOT9-208ENST00000542068 RICTORQ6R327 1708 aa18.73■□□□□ 0.59
CNOT9-208ENST00000542068 CPS1P31327 1500 aa18.73■□□□□ 0.59
CNOT9-208ENST00000542068 CLTCQ00610 1675 aaKnown RBP18.72■□□□□ 0.59
CNOT9-208ENST00000542068 UPF3BQ9BZI7 483 aaKnown RBP18.72■□□□□ 0.59
CNOT9-208ENST00000542068 MSH6P52701 1360 aa18.72■□□□□ 0.59
CNOT9-208ENST00000542068 BRPF1P55201 1214 aaPredicted RBP18.72■□□□□ 0.59
CNOT9-208ENST00000542068 EYA1Q99502 592 aa18.72■□□□□ 0.59
CNOT9-208ENST00000542068 LARP6Q9BRS8 491 aaKnown RBP18.72■□□□□ 0.59
CNOT9-208ENST00000542068 ZDHHC9Q9Y397 364 aa18.72■□□□□ 0.59
CNOT9-208ENST00000542068 PTCH1Q13635 1447 aa18.72■□□□□ 0.59
CNOT9-208ENST00000542068 PTMAP06454 111 aaKnown RBP18.71■□□□□ 0.59
CNOT9-208ENST00000542068 ANO2Q9NQ90 1003 aa18.71■□□□□ 0.59
CNOT9-208ENST00000542068 MED14O60244 1454 aa18.71■□□□□ 0.59
CNOT9-208ENST00000542068 TMEM63CQ9P1W3 806 aa18.71■□□□□ 0.59
CNOT9-208ENST00000542068 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
CNOT9-208ENST00000542068 REC8O95072 547 aa18.7■□□□□ 0.58
CNOT9-208ENST00000542068 ERC2O15083 957 aa18.7■□□□□ 0.58
CNOT9-208ENST00000542068 MAP4K4O95819 1239 aaPredicted RBP18.7■□□□□ 0.58
CNOT9-208ENST00000542068 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
CNOT9-208ENST00000542068 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
CNOT9-208ENST00000542068 ANXA1P04083 346 aa18.69■□□□□ 0.58
CNOT9-208ENST00000542068 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
CNOT9-208ENST00000542068 PKNOX2Q96KN3 472 aa18.68■□□□□ 0.58
CNOT9-208ENST00000542068 ATP7BP35670 1465 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms