RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 TNNT2P45379 298 aaPredicted RBP30.31■■■□□ 2.44
C2CD3-216ENST00000541922 WASHC2AQ641Q2 1341 aa30.3■■■□□ 2.44
C2CD3-216ENST00000541922 POLKQ9UBT6 870 aa30.3■■■□□ 2.44
C2CD3-216ENST00000541922 LRP5O75197 1615 aa30.29■■■□□ 2.44
C2CD3-216ENST00000541922 NSD2O96028 1365 aa30.29■■■□□ 2.44
C2CD3-216ENST00000541922 SHANK3Q9BYB0 1731 aa30.28■■■□□ 2.44
C2CD3-216ENST00000541922 TATP17735 454 aaPredicted RBP30.28■■■□□ 2.44
C2CD3-216ENST00000541922 KNSTRNQ9Y448 316 aa30.28■■■□□ 2.44
C2CD3-216ENST00000541922 BTAF1O14981 1849 aa30.27■■■□□ 2.44
C2CD3-216ENST00000541922 PROM2Q8N271 834 aa30.27■■■□□ 2.44
C2CD3-216ENST00000541922 TXNRD1Q16881 649 aa30.26■■■□□ 2.43
C2CD3-216ENST00000541922 MORC1Q86VD1 984 aa30.23■■■□□ 2.43
C2CD3-216ENST00000541922 DOT1LQ8TEK3 1739 aa30.21■■■□□ 2.43
C2CD3-216ENST00000541922 SYTL4Q96C24 671 aaPredicted RBP30.2■■■□□ 2.43
C2CD3-216ENST00000541922 ANO8Q9HCE9 1232 aaPredicted RBP30.19■■■□□ 2.42
C2CD3-216ENST00000541922 NCAPD2Q15021 1401 aa30.19■■■□□ 2.42
C2CD3-216ENST00000541922 PRIM1P49642 420 aaKnown RBP30.18■■■□□ 2.42
C2CD3-216ENST00000541922 EYA1Q99502 592 aa30.18■■■□□ 2.42
C2CD3-216ENST00000541922 SRCAPQ6ZRS2 3230 aa30.18■■■□□ 2.42
C2CD3-216ENST00000541922 PCDH11XQ9BZA7 1347 aa30.18■■■□□ 2.42
C2CD3-216ENST00000541922 PCDH11YQ9BZA8 1340 aa30.18■■■□□ 2.42
C2CD3-216ENST00000541922 EIF4A2Q14240 407 aaKnown RBP30.16■■■□□ 2.42
C2CD3-216ENST00000541922 AMER1Q5JTC6 1135 aaPredicted RBP30.15■■■□□ 2.42
C2CD3-216ENST00000541922 STK32BQ9NY57 414 aa30.15■■■□□ 2.42
C2CD3-216ENST00000541922 PKD1L3Q7Z443 1732 aa30.13■■■□□ 2.41
C2CD3-216ENST00000541922 SPG7Q9UQ90 795 aa30.11■■■□□ 2.41
C2CD3-216ENST00000541922 CYP27B1O15528 508 aa30.1■■■□□ 2.41
C2CD3-216ENST00000541922 SLC15A2Q16348 729 aa30.1■■■□□ 2.41
C2CD3-216ENST00000541922 PER1O15534 1290 aaPredicted RBP30.09■■■□□ 2.41
C2CD3-216ENST00000541922 SLC27A3Q5K4L6 730 aa30.07■■■□□ 2.4
C2CD3-216ENST00000541922 SPON1Q9HCB6 807 aa30.07■■■□□ 2.4
C2CD3-216ENST00000541922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.07■■■□□ 2.4
C2CD3-216ENST00000541922 CASZ1Q86V15 1759 aa30.06■■■□□ 2.4
C2CD3-216ENST00000541922 IGSF1Q8N6C5 1336 aa30.06■■■□□ 2.4
C2CD3-216ENST00000541922 LRRC4BQ9NT99 713 aa30.06■■■□□ 2.4
C2CD3-216ENST00000541922 PAPPAQ13219 1627 aa30.06■■■□□ 2.4
C2CD3-216ENST00000541922 LY75O60449 1722 aa30.04■■■□□ 2.4
C2CD3-216ENST00000541922 CC2D1BQ5T0F9 858 aaKnown RBP30.03■■■□□ 2.4
C2CD3-216ENST00000541922 PDGFDQ9GZP0 370 aaPredicted RBP30.03■■■□□ 2.4
C2CD3-216ENST00000541922 NKX1-1Q15270 411 aaPredicted RBP30.01■■■□□ 2.39
C2CD3-216ENST00000541922 TOGARAM1Q9Y4F4 1720 aa30.01■■■□□ 2.39
C2CD3-216ENST00000541922 ITGB4P16144 1822 aa30.01■■■□□ 2.39
C2CD3-216ENST00000541922 MPRIPQ6WCQ1 1025 aa30■■■□□ 2.39
C2CD3-216ENST00000541922 PLEKHG2Q9H7P9 1386 aa30■■■□□ 2.39
C2CD3-216ENST00000541922 IFNL2Q8IZJ0 200 aa29.99■■■□□ 2.39
C2CD3-216ENST00000541922 KCNQ4P56696 695 aa29.98■■■□□ 2.39
C2CD3-216ENST00000541922 ZNF827Q17R98 1081 aa29.98■■■□□ 2.39
C2CD3-216ENST00000541922 CCNL1Q9UK58 526 aaPredicted RBP29.98■■■□□ 2.39
C2CD3-216ENST00000541922 ZBTB7AO95365 584 aa29.97■■■□□ 2.39
C2CD3-216ENST00000541922 PHKG2P15735 406 aa29.97■■■□□ 2.39
C2CD3-216ENST00000541922 MTHFSP49914 203 aa29.97■■■□□ 2.39
C2CD3-216ENST00000541922 PPP1R1BQ9UD71 204 aaPredicted RBP29.97■■■□□ 2.39
C2CD3-216ENST00000541922 NPC1L1Q9UHC9 1359 aa29.97■■■□□ 2.39
C2CD3-216ENST00000541922 IL13P35225 146 aa29.95■■■□□ 2.39
C2CD3-216ENST00000541922 CNGB1Q14028 1251 aaPredicted RBP29.95■■■□□ 2.39
C2CD3-216ENST00000541922 AKT1S1Q96B36 256 aa29.95■■■□□ 2.39
C2CD3-216ENST00000541922 PLEKHO1Q53GL0 409 aaPredicted RBP29.94■■■□□ 2.38
C2CD3-216ENST00000541922 SULT6B1Q6IMI4 303 aa29.93■■■□□ 2.38
C2CD3-216ENST00000541922 AEBP1Q8IUX7 1158 aa29.93■■■□□ 2.38
C2CD3-216ENST00000541922 PALLDQ8WX93 1383 aa29.92■■■□□ 2.38
C2CD3-216ENST00000541922 SMARCC1Q92922 1105 aaPredicted RBP29.92■■■□□ 2.38
C2CD3-216ENST00000541922 ATF5Q9Y2D1 282 aaPredicted RBP29.92■■■□□ 2.38
C2CD3-216ENST00000541922 AMOTQ4VCS5 1084 aa29.91■■■□□ 2.38
C2CD3-216ENST00000541922 PIGBQ92521 554 aa29.91■■■□□ 2.38
C2CD3-216ENST00000541922 MTFR1LQ9H019 292 aa29.91■■■□□ 2.38
C2CD3-216ENST00000541922 QSER1Q2KHR3 1735 aa29.91■■■□□ 2.38
C2CD3-216ENST00000541922 TMOD3Q9NYL9 352 aa29.9■■■□□ 2.38
C2CD3-216ENST00000541922 TFCP2L1Q9NZI6 479 aa29.9■■■□□ 2.38
C2CD3-216ENST00000541922 KDRP35968 1356 aa29.89■■■□□ 2.37
C2CD3-216ENST00000541922 HSP90AB1P08238 724 aaKnown RBP29.88■■■□□ 2.37
C2CD3-216ENST00000541922 HMGB2P26583 209 aaKnown RBP29.88■■■□□ 2.37
C2CD3-216ENST00000541922 ZNF530Q6P9A1 599 aaPredicted RBP29.88■■■□□ 2.37
C2CD3-216ENST00000541922 TUBGCP6Q96RT7 1819 aa29.87■■■□□ 2.37
C2CD3-216ENST00000541922 C5P01031 1676 aa29.86■■■□□ 2.37
C2CD3-216ENST00000541922 PTGER2P43116 358 aa29.86■■■□□ 2.37
C2CD3-216ENST00000541922 DIAPH1O60610 1272 aaKnown RBP29.85■■■□□ 2.37
C2CD3-216ENST00000541922 C1orf141Q5JVX7 400 aa29.84■■■□□ 2.37
C2CD3-216ENST00000541922 DCAF5Q96JK2 942 aa29.84■■■□□ 2.37
C2CD3-216ENST00000541922 PNPLA7Q6ZV29 1317 aa29.84■■■□□ 2.37
C2CD3-216ENST00000541922 TAF1LQ8IZX4 1826 aa29.84■■■□□ 2.37
C2CD3-216ENST00000541922 ERVV-2B6SEH9 535 aa29.82■■■□□ 2.36
C2CD3-216ENST00000541922 SLC16A10Q8TF71 515 aa29.82■■■□□ 2.36
C2CD3-216ENST00000541922 HMOX1P09601 288 aa29.8■■■□□ 2.36
C2CD3-216ENST00000541922 ASAP1Q9ULH1 1129 aa29.8■■■□□ 2.36
C2CD3-216ENST00000541922 SGIP1Q9BQI5 828 aa29.79■■■□□ 2.36
C2CD3-216ENST00000541922 KDM6AO15550 1401 aaPredicted RBP29.79■■■□□ 2.36
C2CD3-216ENST00000541922 LOC102724428A0A0B4J2F2 783 aa29.78■■■□□ 2.36
C2CD3-216ENST00000541922 SIK1P57059 783 aa29.78■■■□□ 2.36
C2CD3-216ENST00000541922 ATG3Q9NT62 314 aa29.77■■■□□ 2.36
C2CD3-216ENST00000541922 COL3A1P02461 1466 aaPredicted RBP29.76■■■□□ 2.35
C2CD3-216ENST00000541922 MSH5O43196 834 aa29.76■■■□□ 2.35
C2CD3-216ENST00000541922 CABP4P57796 275 aa29.76■■■□□ 2.35
C2CD3-216ENST00000541922 C4BP0C0L5 1744 aa29.76■■■□□ 2.35
C2CD3-216ENST00000541922 U2SURPO15042 1029 aaKnown RBP29.73■■■□□ 2.35
C2CD3-216ENST00000541922 COL23A1Q86Y22 540 aaPredicted RBP29.73■■■□□ 2.35
C2CD3-216ENST00000541922 AK7Q96M32 723 aa29.73■■■□□ 2.35
C2CD3-216ENST00000541922 CFAP53Q96M91 514 aa29.73■■■□□ 2.35
C2CD3-216ENST00000541922 ARXQ96QS3 562 aa29.73■■■□□ 2.35
C2CD3-216ENST00000541922 ATP6V1AP38606 617 aa29.72■■■□□ 2.35
C2CD3-216ENST00000541922 AKAP4Q5JQC9 854 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms