RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 CCDC184Q52MB2 194 aa28.04■■■□□ 2.08
MSRB3-211ENST00000541897 DISP2A7MBM2 1401 aa28.03■■■□□ 2.08
MSRB3-211ENST00000541897 TNS1Q9HBL0 1735 aaKnown RBP28.03■■■□□ 2.08
MSRB3-211ENST00000541897 PSDA5PKW4 1024 aaPredicted RBP28.02■■■□□ 2.08
MSRB3-211ENST00000541897 SULT6B1Q6IMI4 303 aa28.01■■■□□ 2.07
MSRB3-211ENST00000541897 USHBP1Q8N6Y0 703 aa28.01■■■□□ 2.07
MSRB3-211ENST00000541897 WNK3Q9BYP7 1800 aa28■■■□□ 2.07
MSRB3-211ENST00000541897 FCHSD2O94868 740 aa28■■■□□ 2.07
MSRB3-211ENST00000541897 U2AF1L5P0DN76 240 aaPredicted RBP28■■■□□ 2.07
MSRB3-211ENST00000541897 IL2RBP14784 551 aa28■■■□□ 2.07
MSRB3-211ENST00000541897 U2AF1Q01081 240 aaKnown RBP eCLIP28■■■□□ 2.07
MSRB3-211ENST00000541897 WDR43Q15061 677 aaKnown RBP eCLIP27.99■■■□□ 2.07
MSRB3-211ENST00000541897 PNISRQ8TF01 805 aaKnown RBP27.99■■■□□ 2.07
MSRB3-211ENST00000541897 RAPGEF4Q8WZA2 1011 aa27.99■■■□□ 2.07
MSRB3-211ENST00000541897 TRIM37O94972 964 aa27.97■■■□□ 2.07
MSRB3-211ENST00000541897 AEBP1Q8IUX7 1158 aa27.97■■■□□ 2.07
MSRB3-211ENST00000541897 PARP4Q9UKK3 1724 aaKnown RBP27.96■■■□□ 2.07
MSRB3-211ENST00000541897 OVOS2A0A0G2JMS6 1433 aa27.96■■■□□ 2.07
MSRB3-211ENST00000541897 TATP17735 454 aaPredicted RBP27.96■■■□□ 2.07
MSRB3-211ENST00000541897 FAM196AQ6ZSG2 479 aa27.96■■■□□ 2.07
MSRB3-211ENST00000541897 RSPH6AQ9H0K4 717 aa27.96■■■□□ 2.07
MSRB3-211ENST00000541897 PNNQ9H307 717 aaKnown RBP27.96■■■□□ 2.07
MSRB3-211ENST00000541897 MEGF6O75095 1541 aa27.96■■■□□ 2.07
MSRB3-211ENST00000541897 HMOX1P09601 288 aa27.95■■■□□ 2.06
MSRB3-211ENST00000541897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.95■■■□□ 2.06
MSRB3-211ENST00000541897 EZH2Q15910 746 aaKnown RBP27.94■■■□□ 2.06
MSRB3-211ENST00000541897 PDE3BQ13370 1112 aa27.93■■■□□ 2.06
MSRB3-211ENST00000541897 ADAMTS8Q9UP79 889 aa27.92■■■□□ 2.06
MSRB3-211ENST00000541897 TNS2Q63HR2 1409 aa27.91■■■□□ 2.06
MSRB3-211ENST00000541897 AMOTQ4VCS5 1084 aa27.9■■■□□ 2.06
MSRB3-211ENST00000541897 PRKAR2BP31323 418 aa27.89■■■□□ 2.06
MSRB3-211ENST00000541897 PKD1L3Q7Z443 1732 aa27.89■■■□□ 2.05
MSRB3-211ENST00000541897 LRRC37A3O60309 1634 aa27.89■■■□□ 2.05
MSRB3-211ENST00000541897 EXOC5O00471 708 aa27.88■■■□□ 2.05
MSRB3-211ENST00000541897 APBA3O96018 575 aa27.88■■■□□ 2.05
MSRB3-211ENST00000541897 R3HDM1Q15032 1099 aaKnown RBP27.88■■■□□ 2.05
MSRB3-211ENST00000541897 DDB1Q16531 1140 aa27.88■■■□□ 2.05
MSRB3-211ENST00000541897 CAMKK2Q96RR4 588 aa27.88■■■□□ 2.05
MSRB3-211ENST00000541897 PLEKHF1Q96S99 279 aa27.88■■■□□ 2.05
MSRB3-211ENST00000541897 PLEKHO1Q53GL0 409 aaPredicted RBP27.87■■■□□ 2.05
MSRB3-211ENST00000541897 ZCRB1Q8TBF4 217 aaKnown RBP27.87■■■□□ 2.05
MSRB3-211ENST00000541897 SPG7Q9UQ90 795 aa27.87■■■□□ 2.05
MSRB3-211ENST00000541897 NEFMP07197 916 aa27.85■■■□□ 2.05
MSRB3-211ENST00000541897 PCDH11XQ9BZA7 1347 aa27.84■■■□□ 2.05
MSRB3-211ENST00000541897 PCDH11YQ9BZA8 1340 aa27.84■■■□□ 2.05
MSRB3-211ENST00000541897 RUNDC1Q96C34 613 aa27.83■■■□□ 2.05
MSRB3-211ENST00000541897 GAS2L2Q8NHY3 880 aa27.81■■■□□ 2.04
MSRB3-211ENST00000541897 PHACTR3Q96KR7 559 aa27.81■■■□□ 2.04
MSRB3-211ENST00000541897 SHANK3Q9BYB0 1731 aa27.81■■■□□ 2.04
MSRB3-211ENST00000541897 FAM9BQ8IZU0 186 aa27.8■■■□□ 2.04
MSRB3-211ENST00000541897 MAPK8IP3Q9UPT6 1336 aa27.8■■■□□ 2.04
MSRB3-211ENST00000541897 RREB1Q92766 1687 aa27.8■■■□□ 2.04
MSRB3-211ENST00000541897 MTHFSDQ2M296 383 aaKnown RBP27.79■■■□□ 2.04
MSRB3-211ENST00000541897 IFNL2Q8IZJ0 200 aa27.78■■■□□ 2.04
MSRB3-211ENST00000541897 SBF2Q86WG5 1849 aa27.78■■■□□ 2.04
MSRB3-211ENST00000541897 NUP188Q5SRE5 1749 aa27.78■■■□□ 2.04
MSRB3-211ENST00000541897 BCL9O00512 1426 aa27.77■■■□□ 2.04
MSRB3-211ENST00000541897 CYP27B1O15528 508 aa27.77■■■□□ 2.04
MSRB3-211ENST00000541897 PHKG2P15735 406 aa27.76■■■□□ 2.03
MSRB3-211ENST00000541897 ZNF530Q6P9A1 599 aaPredicted RBP27.76■■■□□ 2.03
MSRB3-211ENST00000541897 NKX1-1Q15270 411 aaPredicted RBP27.75■■■□□ 2.03
MSRB3-211ENST00000541897 AKAP4Q5JQC9 854 aa27.75■■■□□ 2.03
MSRB3-211ENST00000541897 CCDC146Q8IYE0 955 aa27.75■■■□□ 2.03
MSRB3-211ENST00000541897 MARCH10Q8NA82 808 aaPredicted RBP27.75■■■□□ 2.03
MSRB3-211ENST00000541897 HSP90AB1P08238 724 aaKnown RBP27.74■■■□□ 2.03
MSRB3-211ENST00000541897 NFE2L2Q16236 605 aa27.74■■■□□ 2.03
MSRB3-211ENST00000541897 C1orf141Q5JVX7 400 aa27.74■■■□□ 2.03
MSRB3-211ENST00000541897 DDX54Q8TDD1 881 aaKnown RBP27.74■■■□□ 2.03
MSRB3-211ENST00000541897 NCBP3Q53F19 620 aaKnown RBP27.72■■■□□ 2.03
MSRB3-211ENST00000541897 HTATSF1O43719 755 aaKnown RBP27.71■■■□□ 2.03
MSRB3-211ENST00000541897 MAP3K5Q99683 1374 aa27.71■■■□□ 2.03
MSRB3-211ENST00000541897 TMPOP42166 694 aaKnown RBP27.7■■■□□ 2.02
MSRB3-211ENST00000541897 GNAT3A8MTJ3 354 aa27.69■■■□□ 2.02
MSRB3-211ENST00000541897 DCAF5Q96JK2 942 aa27.69■■■□□ 2.02
MSRB3-211ENST00000541897 NGEFQ8N5V2 710 aa27.68■■■□□ 2.02
MSRB3-211ENST00000541897 APAF1O14727 1248 aa27.67■■■□□ 2.02
MSRB3-211ENST00000541897 NBPF14Q5TI25 921 aa27.67■■■□□ 2.02
MSRB3-211ENST00000541897 PTF1AQ7RTS3 328 aa27.67■■■□□ 2.02
MSRB3-211ENST00000541897 ADAMTS7Q9UKP4 1686 aa27.67■■■□□ 2.02
MSRB3-211ENST00000541897 LMOD3Q0VAK6 560 aa27.65■■■□□ 2.02
MSRB3-211ENST00000541897 RIPK4P57078 832 aa27.64■■■□□ 2.02
MSRB3-211ENST00000541897 KDM6AO15550 1401 aaPredicted RBP27.64■■■□□ 2.02
MSRB3-211ENST00000541897 RTF1Q92541 710 aaKnown RBP27.63■■■□□ 2.01
MSRB3-211ENST00000541897 CEMIPQ8WUJ3 1361 aa27.62■■■□□ 2.01
MSRB3-211ENST00000541897 ERVV-2B6SEH9 535 aa27.62■■■□□ 2.01
MSRB3-211ENST00000541897 CCDC27Q2M243 656 aa27.62■■■□□ 2.01
MSRB3-211ENST00000541897 DLG5Q8TDM6 1919 aa27.61■■■□□ 2.01
MSRB3-211ENST00000541897 RNMTO43148 476 aaKnown RBP27.61■■■□□ 2.01
MSRB3-211ENST00000541897 MPRIPQ6WCQ1 1025 aa27.61■■■□□ 2.01
MSRB3-211ENST00000541897 BCL11BQ9C0K0 894 aaPredicted RBP27.61■■■□□ 2.01
MSRB3-211ENST00000541897 RGPD3A6NKT7 1758 aaPredicted RBP27.6■■■□□ 2.01
MSRB3-211ENST00000541897 RGPD4Q7Z3J3 1758 aa27.6■■■□□ 2.01
MSRB3-211ENST00000541897 SCN11AQ9UI33 1791 aa27.6■■■□□ 2.01
MSRB3-211ENST00000541897 PLSCR1O15162 318 aa27.59■■■□□ 2.01
MSRB3-211ENST00000541897 IL17REQ8NFR9 667 aa27.59■■■□□ 2.01
MSRB3-211ENST00000541897 RRP7AQ9Y3A4 280 aaKnown RBP27.59■■■□□ 2.01
MSRB3-211ENST00000541897 TOGARAM1Q9Y4F4 1720 aa27.58■■■□□ 2.01
MSRB3-211ENST00000541897 MRC1P22897 1456 aa27.58■■■□□ 2.01
MSRB3-211ENST00000541897 TRIM35Q9UPQ4 493 aa27.58■■■□□ 2.01
MSRB3-211ENST00000541897 KAT6BQ8WYB5 2073 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms