RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 PLEKHG2Q9H7P9 1386 aa16.48■□□□□ 0.23
LMO3-228ENST00000541846 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
LMO3-228ENST00000541846 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
LMO3-228ENST00000541846 WNK3Q9BYP7 1800 aa16.47■□□□□ 0.23
LMO3-228ENST00000541846 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
LMO3-228ENST00000541846 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
LMO3-228ENST00000541846 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
LMO3-228ENST00000541846 MEGF6O75095 1541 aa16.45■□□□□ 0.22
LMO3-228ENST00000541846 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
LMO3-228ENST00000541846 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
LMO3-228ENST00000541846 CDCA7Q9BWT1 371 aaPredicted RBP16.45■□□□□ 0.22
LMO3-228ENST00000541846 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
LMO3-228ENST00000541846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.44■□□□□ 0.22
LMO3-228ENST00000541846 VIRMAQ69YN4 1812 aaKnown RBP16.44■□□□□ 0.22
LMO3-228ENST00000541846 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
LMO3-228ENST00000541846 IL2RBP14784 551 aa16.43■□□□□ 0.22
LMO3-228ENST00000541846 RIPK4P57078 832 aa16.43■□□□□ 0.22
LMO3-228ENST00000541846 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
LMO3-228ENST00000541846 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
LMO3-228ENST00000541846 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
LMO3-228ENST00000541846 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
LMO3-228ENST00000541846 USP35Q9P2H5 1018 aa16.43■□□□□ 0.22
LMO3-228ENST00000541846 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
LMO3-228ENST00000541846 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
LMO3-228ENST00000541846 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
LMO3-228ENST00000541846 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
LMO3-228ENST00000541846 POTEAQ6S8J7 498 aa16.41■□□□□ 0.22
LMO3-228ENST00000541846 WWC1Q8IX03 1113 aa16.41■□□□□ 0.22
LMO3-228ENST00000541846 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
LMO3-228ENST00000541846 SHANK3Q9BYB0 1731 aa16.41■□□□□ 0.22
LMO3-228ENST00000541846 OVOS2A0A0G2JMS6 1433 aa16.4■□□□□ 0.22
LMO3-228ENST00000541846 AMOTQ4VCS5 1084 aa16.4■□□□□ 0.22
LMO3-228ENST00000541846 PLEKHO1Q53GL0 409 aaPredicted RBP16.4■□□□□ 0.22
LMO3-228ENST00000541846 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
LMO3-228ENST00000541846 GLI3P10071 1580 aa16.38■□□□□ 0.21
LMO3-228ENST00000541846 RXRBP28702 533 aa16.38■□□□□ 0.21
LMO3-228ENST00000541846 ZCRB1Q8TBF4 217 aaKnown RBP16.38■□□□□ 0.21
LMO3-228ENST00000541846 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
LMO3-228ENST00000541846 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
LMO3-228ENST00000541846 CENPBP07199 599 aaPredicted RBP16.37■□□□□ 0.21
LMO3-228ENST00000541846 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
LMO3-228ENST00000541846 PDE3BQ13370 1112 aa16.37■□□□□ 0.21
LMO3-228ENST00000541846 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
LMO3-228ENST00000541846 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
LMO3-228ENST00000541846 EXOC5O00471 708 aa16.36■□□□□ 0.21
LMO3-228ENST00000541846 GOLGA2Q08379 1002 aa16.36■□□□□ 0.21
LMO3-228ENST00000541846 WDR63Q8IWG1 891 aa16.36■□□□□ 0.21
LMO3-228ENST00000541846 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
LMO3-228ENST00000541846 ADAMTS7Q9UKP4 1686 aa16.36■□□□□ 0.21
LMO3-228ENST00000541846 SCN11AQ9UI33 1791 aa16.36■□□□□ 0.21
LMO3-228ENST00000541846 GNAT3A8MTJ3 354 aa16.35■□□□□ 0.21
LMO3-228ENST00000541846 DCTN1Q14203 1278 aa16.35■□□□□ 0.21
LMO3-228ENST00000541846 SEPT12Q8IYM1 358 aa16.35■□□□□ 0.21
LMO3-228ENST00000541846 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
LMO3-228ENST00000541846 CYP27B1O15528 508 aa16.34■□□□□ 0.21
LMO3-228ENST00000541846 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
LMO3-228ENST00000541846 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
LMO3-228ENST00000541846 DDB1Q16531 1140 aa16.34■□□□□ 0.21
LMO3-228ENST00000541846 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
LMO3-228ENST00000541846 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
LMO3-228ENST00000541846 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
LMO3-228ENST00000541846 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
LMO3-228ENST00000541846 MCM10Q7L590 875 aa16.33■□□□□ 0.2
LMO3-228ENST00000541846 RTF1Q92541 710 aaKnown RBP16.33■□□□□ 0.2
LMO3-228ENST00000541846 PHKG2P15735 406 aa16.32■□□□□ 0.2
LMO3-228ENST00000541846 IL16Q14005 1332 aa16.32■□□□□ 0.2
LMO3-228ENST00000541846 TNS2Q63HR2 1409 aa16.32■□□□□ 0.2
LMO3-228ENST00000541846 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
LMO3-228ENST00000541846 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
LMO3-228ENST00000541846 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
LMO3-228ENST00000541846 THSD7AQ9UPZ6 1657 aa16.32■□□□□ 0.2
LMO3-228ENST00000541846 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
LMO3-228ENST00000541846 E9PSI1 815 aa16.31■□□□□ 0.2
LMO3-228ENST00000541846 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
LMO3-228ENST00000541846 MARCH10Q8NA82 808 aaPredicted RBP16.31■□□□□ 0.2
LMO3-228ENST00000541846 IL17REQ8NFR9 667 aa16.31■□□□□ 0.2
LMO3-228ENST00000541846 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
LMO3-228ENST00000541846 CALD1Q05682 793 aaKnown RBP16.3■□□□□ 0.2
LMO3-228ENST00000541846 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
LMO3-228ENST00000541846 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
LMO3-228ENST00000541846 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
LMO3-228ENST00000541846 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
LMO3-228ENST00000541846 DDX54Q8TDD1 881 aaKnown RBP16.29■□□□□ 0.2
LMO3-228ENST00000541846 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
LMO3-228ENST00000541846 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
LMO3-228ENST00000541846 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
LMO3-228ENST00000541846 BCL9O00512 1426 aa16.28■□□□□ 0.2
LMO3-228ENST00000541846 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
LMO3-228ENST00000541846 DCAF5Q96JK2 942 aa16.27■□□□□ 0.2
LMO3-228ENST00000541846 MYH16Q9H6N6 1097 aa16.27■□□□□ 0.2
LMO3-228ENST00000541846 IFT57Q9NWB7 429 aa16.27■□□□□ 0.2
LMO3-228ENST00000541846 KDM3BQ7LBC6 1761 aa16.27■□□□□ 0.2
LMO3-228ENST00000541846 RGS12O14924 1447 aa16.27■□□□□ 0.19
LMO3-228ENST00000541846 FANCIQ9NVI1 1328 aa16.26■□□□□ 0.19
LMO3-228ENST00000541846 GNAI1P63096 354 aa16.26■□□□□ 0.19
LMO3-228ENST00000541846 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
LMO3-228ENST00000541846 TSR2Q969E8 191 aaKnown RBP16.26■□□□□ 0.19
LMO3-228ENST00000541846 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
LMO3-228ENST00000541846 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
LMO3-228ENST00000541846 MRC1P22897 1456 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms