RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 NXF1Q9UBU9 619 aaKnown RBP11.05□□□□□ -0.64
C12orf56-204ENST00000541802 CHIC2Q9UKJ5 165 aa11.05□□□□□ -0.64
C12orf56-204ENST00000541802 MAP7D1Q3KQU3 841 aa11.04□□□□□ -0.64
C12orf56-204ENST00000541802 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
C12orf56-204ENST00000541802 PPP1R26Q5T8A7 1209 aaPredicted RBP11.04□□□□□ -0.64
C12orf56-204ENST00000541802 USP17L3A6NCW0 530 aa11.03□□□□□ -0.64
C12orf56-204ENST00000541802 USP17L4A6NCW7 530 aa11.03□□□□□ -0.64
C12orf56-204ENST00000541802 DHX9Q08211 1270 aaKnown RBP11.03□□□□□ -0.64
C12orf56-204ENST00000541802 USP17L2Q6R6M4 530 aa11.03□□□□□ -0.64
C12orf56-204ENST00000541802 USP17L1Q7RTZ2 530 aa11.03□□□□□ -0.64
C12orf56-204ENST00000541802 NCOA4Q13772 614 aa11.02□□□□□ -0.65
C12orf56-204ENST00000541802 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
C12orf56-204ENST00000541802 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
C12orf56-204ENST00000541802 IRF7Q92985 503 aa11.01□□□□□ -0.65
C12orf56-204ENST00000541802 CYLDQ9NQC7 956 aa11.01□□□□□ -0.65
C12orf56-204ENST00000541802 SCTRP47872 440 aa11□□□□□ -0.65
C12orf56-204ENST00000541802 CDCA8Q53HL2 280 aa11□□□□□ -0.65
C12orf56-204ENST00000541802 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
C12orf56-204ENST00000541802 EMILIN1Q9Y6C2 1016 aa11□□□□□ -0.65
C12orf56-204ENST00000541802 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.99□□□□□ -0.65
C12orf56-204ENST00000541802 WDR4P57081 412 aaKnown RBP10.99□□□□□ -0.65
C12orf56-204ENST00000541802 SUZ12Q15022 739 aaKnown RBP10.99□□□□□ -0.65
C12orf56-204ENST00000541802 EML3Q32P44 896 aa10.99□□□□□ -0.65
C12orf56-204ENST00000541802 ITPKCQ96DU7 683 aa10.99□□□□□ -0.65
C12orf56-204ENST00000541802 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
C12orf56-204ENST00000541802 USP4Q13107 963 aa10.98□□□□□ -0.65
C12orf56-204ENST00000541802 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
C12orf56-204ENST00000541802 ESF1Q9H501 851 aaKnown RBP10.98□□□□□ -0.65
C12orf56-204ENST00000541802 ZFAND3Q9H8U3 227 aa10.98□□□□□ -0.65
C12orf56-204ENST00000541802 MKRN1Q9UHC7 482 aaKnown RBP10.98□□□□□ -0.65
C12orf56-204ENST00000541802 LZTS3O60299 673 aaPredicted RBP10.97□□□□□ -0.65
C12orf56-204ENST00000541802 LILRA1O75019 489 aa10.97□□□□□ -0.65
C12orf56-204ENST00000541802 ZIC2O95409 532 aaPredicted RBP10.97□□□□□ -0.65
C12orf56-204ENST00000541802 KLF16Q9BXK1 252 aaPredicted RBP10.97□□□□□ -0.65
C12orf56-204ENST00000541802 MYCP01106 439 aaPredicted RBP10.96□□□□□ -0.65
C12orf56-204ENST00000541802 ERVK-9P63128 1117 aa10.96□□□□□ -0.65
C12orf56-204ENST00000541802 CC2D2BQ6DHV5 1058 aa10.96□□□□□ -0.65
C12orf56-204ENST00000541802 VRTNQ9H8Y1 702 aa10.96□□□□□ -0.65
C12orf56-204ENST00000541802 NOD1Q9Y239 953 aa10.96□□□□□ -0.65
C12orf56-204ENST00000541802 TIMP2P16035 220 aa10.95□□□□□ -0.66
C12orf56-204ENST00000541802 CBLBQ13191 982 aa10.95□□□□□ -0.66
C12orf56-204ENST00000541802 KANK4Q5T7N3 995 aaPredicted RBP10.95□□□□□ -0.66
C12orf56-204ENST00000541802 SIRT1Q96EB6 747 aa10.95□□□□□ -0.66
C12orf56-204ENST00000541802 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
C12orf56-204ENST00000541802 VEGFBP49765 207 aa10.94□□□□□ -0.66
C12orf56-204ENST00000541802 SRPK2P78362 688 aaKnown RBP10.94□□□□□ -0.66
C12orf56-204ENST00000541802 PBXIP1Q96AQ6 731 aa10.94□□□□□ -0.66
C12orf56-204ENST00000541802 TRIM52Q96A61 297 aa10.93□□□□□ -0.66
C12orf56-204ENST00000541802 ATP5J2-PTCD1G3V325 749 aa10.92□□□□□ -0.66
C12orf56-204ENST00000541802 H3BM21 787 aa10.92□□□□□ -0.66
C12orf56-204ENST00000541802 RASA1P20936 1047 aa10.92□□□□□ -0.66
C12orf56-204ENST00000541802 OSBPL3Q9H4L5 887 aa10.92□□□□□ -0.66
C12orf56-204ENST00000541802 CAPN5O15484 640 aaPredicted RBP10.91□□□□□ -0.66
C12orf56-204ENST00000541802 GTF2IP78347 998 aa10.91□□□□□ -0.66
C12orf56-204ENST00000541802 TRIM50Q86XT4 487 aa10.91□□□□□ -0.66
C12orf56-204ENST00000541802 OGFOD1Q8N543 542 aa10.91□□□□□ -0.66
C12orf56-204ENST00000541802 ERBB4Q15303 1308 aa10.9□□□□□ -0.66
C12orf56-204ENST00000541802 CLDN10P78369 228 aa10.9□□□□□ -0.66
C12orf56-204ENST00000541802 AGBL1Q96MI9 1066 aa10.9□□□□□ -0.66
C12orf56-204ENST00000541802 PCDHGA11Q9Y5H2 935 aa10.9□□□□□ -0.66
C12orf56-204ENST00000541802 PPP1R15AO75807 674 aaPredicted RBP10.89□□□□□ -0.67
C12orf56-204ENST00000541802 BMP1P13497 986 aa10.89□□□□□ -0.67
C12orf56-204ENST00000541802 PSME1Q06323 249 aa10.89□□□□□ -0.67
C12orf56-204ENST00000541802 CRTC2Q53ET0 693 aaPredicted RBP10.89□□□□□ -0.67
C12orf56-204ENST00000541802 LARP1Q6PKG0 1096 aaKnown RBP10.89□□□□□ -0.67
C12orf56-204ENST00000541802 TRIM46Q7Z4K8 759 aa10.89□□□□□ -0.67
C12orf56-204ENST00000541802 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
C12orf56-204ENST00000541802 DNAAF2Q9NVR5 837 aaKnown RBP10.89□□□□□ -0.67
C12orf56-204ENST00000541802 STAU1O95793 577 aaKnown RBP10.88□□□□□ -0.67
C12orf56-204ENST00000541802 Q6ZVU0 165 aa10.88□□□□□ -0.67
C12orf56-204ENST00000541802 ACIN1Q9UKV3 1341 aaKnown RBP10.87□□□□□ -0.67
C12orf56-204ENST00000541802 ZBTB7BO15156 539 aaPredicted RBP10.87□□□□□ -0.67
C12orf56-204ENST00000541802 ADH1AP07327 375 aa10.87□□□□□ -0.67
C12orf56-204ENST00000541802 ATP1A2P50993 1020 aa10.87□□□□□ -0.67
C12orf56-204ENST00000541802 CYP2U1Q7Z449 544 aa10.87□□□□□ -0.67
C12orf56-204ENST00000541802 KIAA1024Q9UPX6 916 aa10.87□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L15C9J2P7 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L13C9JLJ4 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L12C9JPN9 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L11C9JVI0 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L21D6R901 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L18D6R9N7 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L22D6RA61 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L17D6RBQ6 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L19D6RCP7 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L20D6RJB6 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 RELBQ01201 579 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 USP17L24Q0WX57 530 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 PTK7Q13308 1070 aa10.86□□□□□ -0.67
C12orf56-204ENST00000541802 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
C12orf56-204ENST00000541802 MEIOBQ8N635 442 aa10.85□□□□□ -0.67
C12orf56-204ENST00000541802 KDF1Q8NAX2 398 aaPredicted RBP10.85□□□□□ -0.67
C12orf56-204ENST00000541802 TPCN2Q8NHX9 752 aa10.85□□□□□ -0.67
C12orf56-204ENST00000541802 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
C12orf56-204ENST00000541802 RAB6BQ9NRW1 208 aa10.85□□□□□ -0.67
C12orf56-204ENST00000541802 ATG7O95352 703 aa10.84□□□□□ -0.67
C12orf56-204ENST00000541802 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
C12orf56-204ENST00000541802 LARGE2Q8N3Y3 721 aa10.84□□□□□ -0.67
C12orf56-204ENST00000541802 GNRH1P01148 92 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms