RNA–Protein interactions for RNA: ENST00000541592.1

HIST4H4-206, Transcript of histone cluster 4 H4, humanhuman

TSL 3

Gene HIST4H4, Length 810 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-206ENST00000541592 NBPF4Q96M43 638 aa27.75■■■□□ 2.03
HIST4H4-206ENST00000541592 SHANK3Q9BYB0 1731 aa27.75■■■□□ 2.03
HIST4H4-206ENST00000541592 NSD2O96028 1365 aa27.74■■■□□ 2.03
HIST4H4-206ENST00000541592 FYB1O15117 783 aa27.74■■■□□ 2.03
HIST4H4-206ENST00000541592 DOT1LQ8TEK3 1739 aa27.74■■■□□ 2.03
HIST4H4-206ENST00000541592 SLC27A3Q5K4L6 730 aa27.73■■■□□ 2.03
HIST4H4-206ENST00000541592 KLHL34Q8N239 644 aa27.73■■■□□ 2.03
HIST4H4-206ENST00000541592 ANKRD36BQ8N2N9 1353 aa27.73■■■□□ 2.03
HIST4H4-206ENST00000541592 TUBGCP6Q96RT7 1819 aa27.71■■■□□ 2.03
HIST4H4-206ENST00000541592 TFCP2L1Q9NZI6 479 aa27.71■■■□□ 2.03
HIST4H4-206ENST00000541592 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
HIST4H4-206ENST00000541592 HSP90AB2PQ58FF8 381 aa27.67■■■□□ 2.02
HIST4H4-206ENST00000541592 CHD4Q14839 1912 aa27.67■■■□□ 2.02
HIST4H4-206ENST00000541592 CCNL1Q9UK58 526 aaPredicted RBP27.66■■■□□ 2.02
HIST4H4-206ENST00000541592 LY75O60449 1722 aa27.66■■■□□ 2.02
HIST4H4-206ENST00000541592 MAP3K5Q99683 1374 aa27.65■■■□□ 2.02
HIST4H4-206ENST00000541592 QSER1Q2KHR3 1735 aa27.65■■■□□ 2.02
HIST4H4-206ENST00000541592 TMF1P82094 1093 aa27.65■■■□□ 2.02
HIST4H4-206ENST00000541592 GPR162Q16538 588 aa27.65■■■□□ 2.02
HIST4H4-206ENST00000541592 SLC16A10Q8TF71 515 aa27.65■■■□□ 2.02
HIST4H4-206ENST00000541592 USP47Q96K76 1375 aa27.64■■■□□ 2.02
HIST4H4-206ENST00000541592 NLGN2Q8NFZ4 835 aa27.64■■■□□ 2.02
HIST4H4-206ENST00000541592 GOLGB1Q14789 3259 aaKnown RBP27.63■■■□□ 2.01
HIST4H4-206ENST00000541592 POLD1P28340 1107 aa27.63■■■□□ 2.01
HIST4H4-206ENST00000541592 PELP1Q8IZL8 1130 aaKnown RBP27.63■■■□□ 2.01
HIST4H4-206ENST00000541592 RTL1A6NKG5 1358 aa27.62■■■□□ 2.01
HIST4H4-206ENST00000541592 MSH5O43196 834 aa27.61■■■□□ 2.01
HIST4H4-206ENST00000541592 SLC24A1O60721 1099 aa27.61■■■□□ 2.01
HIST4H4-206ENST00000541592 COL23A1Q86Y22 540 aaPredicted RBP27.61■■■□□ 2.01
HIST4H4-206ENST00000541592 RAPGEF4Q8WZA2 1011 aa27.61■■■□□ 2.01
HIST4H4-206ENST00000541592 COL24A1Q17RW2 1714 aa27.61■■■□□ 2.01
HIST4H4-206ENST00000541592 CARD14Q9BXL6 1004 aa27.6■■■□□ 2.01
HIST4H4-206ENST00000541592 TATP17735 454 aaPredicted RBP27.59■■■□□ 2.01
HIST4H4-206ENST00000541592 MSL1Q68DK7 614 aa27.58■■■□□ 2.01
HIST4H4-206ENST00000541592 EMILIN1Q9Y6C2 1016 aa27.57■■■□□ 2
HIST4H4-206ENST00000541592 INSRP06213 1382 aa27.56■■■□□ 2
HIST4H4-206ENST00000541592 KIF20BQ96Q89 1820 aa27.55■■■□□ 2
HIST4H4-206ENST00000541592 CYP27B1O15528 508 aa27.55■■■□□ 2
HIST4H4-206ENST00000541592 MPRIPQ6WCQ1 1025 aa27.55■■■□□ 2
HIST4H4-206ENST00000541592 SMG6Q86US8 1419 aaKnown RBP27.55■■■□□ 2
HIST4H4-206ENST00000541592 CGNL1Q0VF96 1302 aa27.54■■■□□ 2
HIST4H4-206ENST00000541592 SMIM5Q71RC9 77 aa27.53■■■□□ 2
HIST4H4-206ENST00000541592 FLT4P35916 1363 aa27.52■■■□□ 2
HIST4H4-206ENST00000541592 PCDH11XQ9BZA7 1347 aa27.51■■□□□ 1.99
HIST4H4-206ENST00000541592 PCDH11YQ9BZA8 1340 aa27.51■■□□□ 1.99
HIST4H4-206ENST00000541592 PPM1GO15355 546 aaPredicted RBP27.51■■□□□ 1.99
HIST4H4-206ENST00000541592 YBX3P16989 372 aaKnown RBP eCLIP27.51■■□□□ 1.99
HIST4H4-206ENST00000541592 AMIGO3Q86WK7 504 aa27.5■■□□□ 1.99
HIST4H4-206ENST00000541592 NSD3Q9BZ95 1437 aa27.5■■□□□ 1.99
HIST4H4-206ENST00000541592 PALLDQ8WX93 1383 aa27.49■■□□□ 1.99
HIST4H4-206ENST00000541592 C5P01031 1676 aa27.49■■□□□ 1.99
HIST4H4-206ENST00000541592 TOGARAM1Q9Y4F4 1720 aa27.48■■□□□ 1.99
HIST4H4-206ENST00000541592 ITGB4P16144 1822 aa27.47■■□□□ 1.99
HIST4H4-206ENST00000541592 C1QTNF8P60827 252 aa27.47■■□□□ 1.99
HIST4H4-206ENST00000541592 CDCA8Q53HL2 280 aa27.47■■□□□ 1.99
HIST4H4-206ENST00000541592 TAF1LQ8IZX4 1826 aa27.46■■□□□ 1.99
HIST4H4-206ENST00000541592 PIGBQ92521 554 aa27.45■■□□□ 1.98
HIST4H4-206ENST00000541592 SENP3-EIF4A1A0A087X0R7 540 aa27.44■■□□□ 1.98
HIST4H4-206ENST00000541592 KIF24Q5T7B8 1368 aa27.43■■□□□ 1.98
HIST4H4-206ENST00000541592 EYA1Q99502 592 aa27.42■■□□□ 1.98
HIST4H4-206ENST00000541592 PHF14O94880 888 aa27.41■■□□□ 1.98
HIST4H4-206ENST00000541592 MAP2P11137 1827 aaKnown RBP27.41■■□□□ 1.98
HIST4H4-206ENST00000541592 POLR3GLQ9BT43 218 aa27.4■■□□□ 1.98
HIST4H4-206ENST00000541592 PKD1L3Q7Z443 1732 aa27.4■■□□□ 1.98
HIST4H4-206ENST00000541592 C4BP0C0L5 1744 aa27.39■■□□□ 1.98
HIST4H4-206ENST00000541592 TNNT2P45379 298 aaPredicted RBP27.38■■□□□ 1.97
HIST4H4-206ENST00000541592 NKX1-1Q15270 411 aaPredicted RBP27.38■■□□□ 1.97
HIST4H4-206ENST00000541592 AK7Q96M32 723 aa27.38■■□□□ 1.97
HIST4H4-206ENST00000541592 WWC3Q9ULE0 1092 aa27.38■■□□□ 1.97
HIST4H4-206ENST00000541592 WASHC2AQ641Q2 1341 aa27.38■■□□□ 1.97
HIST4H4-206ENST00000541592 NCAPD2Q15021 1401 aa27.37■■□□□ 1.97
HIST4H4-206ENST00000541592 LINC00116Q8NCU8 138 aa27.37■■□□□ 1.97
HIST4H4-206ENST00000541592 SMARCC1Q92922 1105 aaPredicted RBP27.37■■□□□ 1.97
HIST4H4-206ENST00000541592 POLKQ9UBT6 870 aa27.37■■□□□ 1.97
HIST4H4-206ENST00000541592 ASAP1Q9ULH1 1129 aa27.36■■□□□ 1.97
HIST4H4-206ENST00000541592 SPG7Q9UQ90 795 aa27.36■■□□□ 1.97
HIST4H4-206ENST00000541592 GRIN3BO60391 1043 aa27.35■■□□□ 1.97
HIST4H4-206ENST00000541592 GIGYF1O75420 1035 aaPredicted RBP27.35■■□□□ 1.97
HIST4H4-206ENST00000541592 FLAD1Q8NFF5 587 aa27.35■■□□□ 1.97
HIST4H4-206ENST00000541592 UBR3Q6ZT12 1888 aa27.34■■□□□ 1.97
HIST4H4-206ENST00000541592 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.34■■□□□ 1.97
HIST4H4-206ENST00000541592 LOC102724428A0A0B4J2F2 783 aa27.34■■□□□ 1.97
HIST4H4-206ENST00000541592 SIK1P57059 783 aa27.34■■□□□ 1.97
HIST4H4-206ENST00000541592 CD2APQ9Y5K6 639 aa27.34■■□□□ 1.97
HIST4H4-206ENST00000541592 ANKRD26Q9UPS8 1709 aa27.33■■□□□ 1.97
HIST4H4-206ENST00000541592 ITPK1Q13572 414 aa27.33■■□□□ 1.97
HIST4H4-206ENST00000541592 PHKG2P15735 406 aa27.31■■□□□ 1.96
HIST4H4-206ENST00000541592 EIF4A2Q14240 407 aaKnown RBP27.31■■□□□ 1.96
HIST4H4-206ENST00000541592 TMOD3Q9NYL9 352 aa27.31■■□□□ 1.96
HIST4H4-206ENST00000541592 ATP6V1AP38606 617 aa27.28■■□□□ 1.96
HIST4H4-206ENST00000541592 IFNL2Q8IZJ0 200 aa27.28■■□□□ 1.96
HIST4H4-206ENST00000541592 PCGF6Q9BYE7 350 aa27.28■■□□□ 1.96
HIST4H4-206ENST00000541592 ATG3Q9NT62 314 aa27.28■■□□□ 1.96
HIST4H4-206ENST00000541592 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.27■■□□□ 1.96
HIST4H4-206ENST00000541592 GNPATO15228 680 aa27.26■■□□□ 1.95
HIST4H4-206ENST00000541592 IGSF1Q8N6C5 1336 aa27.25■■□□□ 1.95
HIST4H4-206ENST00000541592 ATP10DQ9P241 1426 aa27.24■■□□□ 1.95
HIST4H4-206ENST00000541592 SSFA2P28290 1259 aa27.24■■□□□ 1.95
HIST4H4-206ENST00000541592 HMGB2P26583 209 aaKnown RBP27.23■■□□□ 1.95
HIST4H4-206ENST00000541592 ZNF526Q8TF50 670 aaPredicted RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms