RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 NBPF4Q96M43 638 aa19.51■□□□□ 0.71
SUDS3-203ENST00000541591 HSPA5P11021 654 aaKnown RBP19.5■□□□□ 0.71
SUDS3-203ENST00000541591 HSP90AB2PQ58FF8 381 aa19.5■□□□□ 0.71
SUDS3-203ENST00000541591 TIMELESSQ9UNS1 1208 aa19.5■□□□□ 0.71
SUDS3-203ENST00000541591 EMILIN1Q9Y6C2 1016 aa19.5■□□□□ 0.71
SUDS3-203ENST00000541591 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
SUDS3-203ENST00000541591 TAF1LQ8IZX4 1826 aa19.49■□□□□ 0.71
SUDS3-203ENST00000541591 SMG6Q86US8 1419 aaKnown RBP19.49■□□□□ 0.71
SUDS3-203ENST00000541591 SYTL4Q96C24 671 aaPredicted RBP19.48■□□□□ 0.71
SUDS3-203ENST00000541591 PPM1GO15355 546 aaPredicted RBP19.47■□□□□ 0.71
SUDS3-203ENST00000541591 ZBTB7AO95365 584 aa19.47■□□□□ 0.71
SUDS3-203ENST00000541591 FLT4P35916 1363 aa19.46■□□□□ 0.71
SUDS3-203ENST00000541591 KCNQ4P56696 695 aa19.46■□□□□ 0.71
SUDS3-203ENST00000541591 STK32BQ9NY57 414 aa19.46■□□□□ 0.71
SUDS3-203ENST00000541591 C5P01031 1676 aa19.46■□□□□ 0.71
SUDS3-203ENST00000541591 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
SUDS3-203ENST00000541591 PPP1R1BQ9UD71 204 aaPredicted RBP19.45■□□□□ 0.7
SUDS3-203ENST00000541591 INSRP06213 1382 aa19.44■□□□□ 0.7
SUDS3-203ENST00000541591 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
SUDS3-203ENST00000541591 ZCRB1Q8TBF4 217 aaKnown RBP19.44■□□□□ 0.7
SUDS3-203ENST00000541591 SPON1Q9HCB6 807 aa19.44■□□□□ 0.7
SUDS3-203ENST00000541591 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
SUDS3-203ENST00000541591 NSD2O96028 1365 aa19.44■□□□□ 0.7
SUDS3-203ENST00000541591 EIF4G2P78344 907 aaKnown RBP eCLIP19.43■□□□□ 0.7
SUDS3-203ENST00000541591 SLC15A2Q16348 729 aa19.43■□□□□ 0.7
SUDS3-203ENST00000541591 ZNF827Q17R98 1081 aa19.43■□□□□ 0.7
SUDS3-203ENST00000541591 LRRC4BQ9NT99 713 aa19.43■□□□□ 0.7
SUDS3-203ENST00000541591 PRIM1P49642 420 aaKnown RBP19.42■□□□□ 0.7
SUDS3-203ENST00000541591 TATP17735 454 aaPredicted RBP19.4■□□□□ 0.7
SUDS3-203ENST00000541591 RAPGEF4Q8WZA2 1011 aa19.4■□□□□ 0.7
SUDS3-203ENST00000541591 CGNL1Q0VF96 1302 aa19.4■□□□□ 0.7
SUDS3-203ENST00000541591 PANK3Q9H999 370 aa19.38■□□□□ 0.69
SUDS3-203ENST00000541591 COL24A1Q17RW2 1714 aa19.37■□□□□ 0.69
SUDS3-203ENST00000541591 KIF24Q5T7B8 1368 aa19.36■□□□□ 0.69
SUDS3-203ENST00000541591 PTGER2P43116 358 aa19.35■□□□□ 0.69
SUDS3-203ENST00000541591 POLKQ9UBT6 870 aa19.35■□□□□ 0.69
SUDS3-203ENST00000541591 PCDH11XQ9BZA7 1347 aa19.34■□□□□ 0.69
SUDS3-203ENST00000541591 PCDH11YQ9BZA8 1340 aa19.34■□□□□ 0.69
SUDS3-203ENST00000541591 UBR3Q6ZT12 1888 aa19.34■□□□□ 0.69
SUDS3-203ENST00000541591 NCAPD2Q15021 1401 aa19.34■□□□□ 0.69
SUDS3-203ENST00000541591 CYP27B1O15528 508 aa19.33■□□□□ 0.68
SUDS3-203ENST00000541591 CHD4Q14839 1912 aa19.33■□□□□ 0.68
SUDS3-203ENST00000541591 WASHC2AQ641Q2 1341 aa19.32■□□□□ 0.68
SUDS3-203ENST00000541591 C4BP0C0L5 1744 aa19.32■□□□□ 0.68
SUDS3-203ENST00000541591 EYA1Q99502 592 aa19.32■□□□□ 0.68
SUDS3-203ENST00000541591 EIF4A2Q14240 407 aaKnown RBP19.31■□□□□ 0.68
SUDS3-203ENST00000541591 MPRIPQ6WCQ1 1025 aa19.31■□□□□ 0.68
SUDS3-203ENST00000541591 AKT1S1Q96B36 256 aa19.31■□□□□ 0.68
SUDS3-203ENST00000541591 CCNL1Q9UK58 526 aaPredicted RBP19.31■□□□□ 0.68
SUDS3-203ENST00000541591 PNPLA7Q6ZV29 1317 aa19.3■□□□□ 0.68
SUDS3-203ENST00000541591 MTFR1LQ9H019 292 aa19.3■□□□□ 0.68
SUDS3-203ENST00000541591 SLC27A3Q5K4L6 730 aa19.28■□□□□ 0.68
SUDS3-203ENST00000541591 FHDC1Q9C0D6 1143 aaPredicted RBP19.28■□□□□ 0.68
SUDS3-203ENST00000541591 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.68
SUDS3-203ENST00000541591 KLHL34Q8N239 644 aa19.27■□□□□ 0.68
SUDS3-203ENST00000541591 SGIP1Q9BQI5 828 aa19.27■□□□□ 0.68
SUDS3-203ENST00000541591 TFCP2L1Q9NZI6 479 aa19.27■□□□□ 0.68
SUDS3-203ENST00000541591 PALLDQ8WX93 1383 aa19.27■□□□□ 0.68
SUDS3-203ENST00000541591 SCN11AQ9UI33 1791 aa19.27■□□□□ 0.67
SUDS3-203ENST00000541591 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
SUDS3-203ENST00000541591 MSH5O43196 834 aa19.25■□□□□ 0.67
SUDS3-203ENST00000541591 MORC1Q86VD1 984 aa19.25■□□□□ 0.67
SUDS3-203ENST00000541591 SMIM5Q71RC9 77 aa19.24■□□□□ 0.67
SUDS3-203ENST00000541591 SPG7Q9UQ90 795 aa19.24■□□□□ 0.67
SUDS3-203ENST00000541591 COL5A3P25940 1745 aaPredicted RBP19.23■□□□□ 0.67
SUDS3-203ENST00000541591 MSL1Q68DK7 614 aa19.22■□□□□ 0.67
SUDS3-203ENST00000541591 AEBP1Q8IUX7 1158 aa19.22■□□□□ 0.67
SUDS3-203ENST00000541591 PIGBQ92521 554 aa19.22■□□□□ 0.67
SUDS3-203ENST00000541591 ARXQ96QS3 562 aa19.22■□□□□ 0.67
SUDS3-203ENST00000541591 SYT17Q9BSW7 474 aa19.21■□□□□ 0.67
SUDS3-203ENST00000541591 KNSTRNQ9Y448 316 aa19.21■□□□□ 0.67
SUDS3-203ENST00000541591 IGSF1Q8N6C5 1336 aa19.21■□□□□ 0.67
SUDS3-203ENST00000541591 PHKG2P15735 406 aa19.2■□□□□ 0.66
SUDS3-203ENST00000541591 COL23A1Q86Y22 540 aaPredicted RBP19.2■□□□□ 0.66
SUDS3-203ENST00000541591 MYH14Q7Z406 1995 aaKnown RBP19.2■□□□□ 0.66
SUDS3-203ENST00000541591 YY1P25490 414 aa19.19■□□□□ 0.66
SUDS3-203ENST00000541591 AMIGO3Q86WK7 504 aa19.19■□□□□ 0.66
SUDS3-203ENST00000541591 C4AP0C0L4 1744 aa19.18■□□□□ 0.66
SUDS3-203ENST00000541591 TMOD3Q9NYL9 352 aa19.18■□□□□ 0.66
SUDS3-203ENST00000541591 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
SUDS3-203ENST00000541591 PHF14O94880 888 aa19.17■□□□□ 0.66
SUDS3-203ENST00000541591 NKX1-1Q15270 411 aaPredicted RBP19.17■□□□□ 0.66
SUDS3-203ENST00000541591 AMER1Q5JTC6 1135 aaPredicted RBP19.17■□□□□ 0.66
SUDS3-203ENST00000541591 CC2D1BQ5T0F9 858 aaKnown RBP19.17■□□□□ 0.66
SUDS3-203ENST00000541591 IFNL2Q8IZJ0 200 aa19.17■□□□□ 0.66
SUDS3-203ENST00000541591 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
SUDS3-203ENST00000541591 TJP1Q07157 1748 aa19.17■□□□□ 0.66
SUDS3-203ENST00000541591 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
SUDS3-203ENST00000541591 POLD1P28340 1107 aa19.15■□□□□ 0.66
SUDS3-203ENST00000541591 ZNF530Q6P9A1 599 aaPredicted RBP19.15■□□□□ 0.66
SUDS3-203ENST00000541591 LINC00116Q8NCU8 138 aa19.15■□□□□ 0.66
SUDS3-203ENST00000541591 UTRNP46939 3433 aa19.15■□□□□ 0.66
SUDS3-203ENST00000541591 SULT6B1Q6IMI4 303 aa19.14■□□□□ 0.65
SUDS3-203ENST00000541591 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.65
SUDS3-203ENST00000541591 NLGN2Q8NFZ4 835 aa19.14■□□□□ 0.65
SUDS3-203ENST00000541591 SLC16A10Q8TF71 515 aa19.14■□□□□ 0.65
SUDS3-203ENST00000541591 ITPK1Q13572 414 aa19.13■□□□□ 0.65
SUDS3-203ENST00000541591 SMARCC1Q92922 1105 aaPredicted RBP19.13■□□□□ 0.65
SUDS3-203ENST00000541591 AK7Q96M32 723 aa19.13■□□□□ 0.65
SUDS3-203ENST00000541591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms