RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 XRN1Q8IZH2 1706 aaKnown RBP11.03□□□□□ -0.64
TCF4-207ENST00000540999 NME9Q86XW9 330 aa11.03□□□□□ -0.64
TCF4-207ENST00000540999 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
TCF4-207ENST00000540999 HSPA2P54652 639 aa11.03□□□□□ -0.64
TCF4-207ENST00000540999 CPSF1Q10570 1443 aaKnown RBP11.03□□□□□ -0.64
TCF4-207ENST00000540999 PMFBP1Q8TBY8 1022 aa11.03□□□□□ -0.64
TCF4-207ENST00000540999 BLMP54132 1417 aaPredicted RBP11.02□□□□□ -0.64
TCF4-207ENST00000540999 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.65
TCF4-207ENST00000540999 NBPF10Q6P3W6 841 aaKnown RBP11.02□□□□□ -0.65
TCF4-207ENST00000540999 PTCH1Q13635 1447 aa11.02□□□□□ -0.65
TCF4-207ENST00000540999 NBPF6Q5VWK0 638 aa11.02□□□□□ -0.65
TCF4-207ENST00000540999 NBPF5PQ86XG9 351 aaPredicted RBP11.02□□□□□ -0.65
TCF4-207ENST00000540999 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.65
TCF4-207ENST00000540999 NBPF4Q96M43 638 aa11.02□□□□□ -0.65
TCF4-207ENST00000540999 CHD2O14647 1828 aaKnown RBP11.01□□□□□ -0.65
TCF4-207ENST00000540999 NKTRP30414 1462 aaKnown RBP11.01□□□□□ -0.65
TCF4-207ENST00000540999 NME8Q8N427 588 aa11.01□□□□□ -0.65
TCF4-207ENST00000540999 RNF217Q8TC41 542 aa11.01□□□□□ -0.65
TCF4-207ENST00000540999 ADGRB2O60241 1585 aa11.01□□□□□ -0.65
TCF4-207ENST00000540999 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
TCF4-207ENST00000540999 KIF20BQ96Q89 1820 aa11.01□□□□□ -0.65
TCF4-207ENST00000540999 ACEP12821 1306 aa11.01□□□□□ -0.65
TCF4-207ENST00000540999 NSD2O96028 1365 aa11.01□□□□□ -0.65
TCF4-207ENST00000540999 CDC42BPGQ6DT37 1551 aa11□□□□□ -0.65
TCF4-207ENST00000540999 CLCN1P35523 988 aa11□□□□□ -0.65
TCF4-207ENST00000540999 TMCO4Q5TGY1 634 aa11□□□□□ -0.65
TCF4-207ENST00000540999 POLR3AO14802 1390 aaPredicted RBP11□□□□□ -0.65
TCF4-207ENST00000540999 SHPRHQ149N8 1683 aa11□□□□□ -0.65
TCF4-207ENST00000540999 SATB1Q01826 763 aa11□□□□□ -0.65
TCF4-207ENST00000540999 LMOD3Q0VAK6 560 aa11□□□□□ -0.65
TCF4-207ENST00000540999 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11□□□□□ -0.654e-6■■■■■ 111.8
TCF4-207ENST00000540999 RAI14Q9P0K7 980 aa11□□□□□ -0.65
TCF4-207ENST00000540999 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
TCF4-207ENST00000540999 SSR1P43307 286 aaKnown RBP10.99□□□□□ -0.65
TCF4-207ENST00000540999 ANKRD26Q9UPS8 1709 aa10.99□□□□□ -0.65
TCF4-207ENST00000540999 APBB1IPQ7Z5R6 666 aaPredicted RBP10.99□□□□□ -0.65
TCF4-207ENST00000540999 ITSN1Q15811 1721 aa10.99□□□□□ -0.65
TCF4-207ENST00000540999 AKAP12Q02952 1782 aa10.99□□□□□ -0.65
TCF4-207ENST00000540999 MON2Q7Z3U7 1717 aa10.98□□□□□ -0.65
TCF4-207ENST00000540999 TOPAZ1Q8N9V7 1692 aa10.98□□□□□ -0.65
TCF4-207ENST00000540999 PIK3R4Q99570 1358 aa10.98□□□□□ -0.65
TCF4-207ENST00000540999 APBB1O00213 710 aa10.98□□□□□ -0.65
TCF4-207ENST00000540999 APAF1O14727 1248 aa10.98□□□□□ -0.65
TCF4-207ENST00000540999 TSPAN18Q96SJ8 248 aa10.98□□□□□ -0.65
TCF4-207ENST00000540999 SPINK5Q9NQ38 1064 aaPredicted RBP10.98□□□□□ -0.65
TCF4-207ENST00000540999 EDC4Q6P2E9 1401 aaKnown RBP10.98□□□□□ -0.65
TCF4-207ENST00000540999 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
TCF4-207ENST00000540999 IPO9Q96P70 1041 aaKnown RBP10.98□□□□□ -0.65
TCF4-207ENST00000540999 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
TCF4-207ENST00000540999 NALCNQ8IZF0 1738 aa10.97□□□□□ -0.65
TCF4-207ENST00000540999 MAP2P11137 1827 aaKnown RBP10.97□□□□□ -0.65
TCF4-207ENST00000540999 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
TCF4-207ENST00000540999 SMG6Q86US8 1419 aaKnown RBP10.96□□□□□ -0.65
TCF4-207ENST00000540999 SMARCA5O60264 1052 aaPredicted RBP10.96□□□□□ -0.65
TCF4-207ENST00000540999 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
TCF4-207ENST00000540999 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
TCF4-207ENST00000540999 RRS1Q15050 365 aaKnown RBP10.96□□□□□ -0.66
TCF4-207ENST00000540999 POLKQ9UBT6 870 aa10.96□□□□□ -0.66
TCF4-207ENST00000540999 RRP7AQ9Y3A4 280 aaKnown RBP10.96□□□□□ -0.66
TCF4-207ENST00000540999 TTC21BQ7Z4L5 1316 aa10.95□□□□□ -0.66
TCF4-207ENST00000540999 NRDCO43847 1150 aa10.95□□□□□ -0.66
TCF4-207ENST00000540999 FOXD4Q12950 439 aaPredicted RBP10.95□□□□□ -0.66
TCF4-207ENST00000540999 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
TCF4-207ENST00000540999 NGDNQ8NEJ9 315 aaKnown RBP10.95□□□□□ -0.66
TCF4-207ENST00000540999 MYH16Q9H6N6 1097 aa10.95□□□□□ -0.66
TCF4-207ENST00000540999 U2SURPO15042 1029 aaKnown RBP10.95□□□□□ -0.66
TCF4-207ENST00000540999 U2AF1L5P0DN76 240 aaPredicted RBP10.95□□□□□ -0.66
TCF4-207ENST00000540999 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
TCF4-207ENST00000540999 MTA1Q13330 715 aa10.95□□□□□ -0.66
TCF4-207ENST00000540999 CFAP53Q96M91 514 aa10.95□□□□□ -0.66
TCF4-207ENST00000540999 INSRP06213 1382 aa10.95□□□□□ -0.66
TCF4-207ENST00000540999 SCP2P22307 547 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 USP6P35125 1406 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
TCF4-207ENST00000540999 RBM26Q5T8P6 1007 aaKnown RBP10.94□□□□□ -0.66
TCF4-207ENST00000540999 GTPBP4Q9BZE4 634 aaKnown RBP10.94□□□□□ -0.66
TCF4-207ENST00000540999 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 GOLGA6CA6NDK9 693 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 GOLGA6BA6NDN3 693 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 DHX16O60231 1041 aaKnown RBP10.94□□□□□ -0.66
TCF4-207ENST00000540999 GOLGA6DP0CG33 693 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 ZKSCAN8Q15776 578 aaPredicted RBP10.94□□□□□ -0.66
TCF4-207ENST00000540999 ANKRD23Q86SG2 305 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 SDR16C5Q8N3Y7 309 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 BORCS6Q96GS4 357 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 COG3Q96JB2 828 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 GOLGA6AQ9NYA3 693 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 RPS6KL1Q9Y6S9 549 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 COL3A1P02461 1466 aaPredicted RBP10.94□□□□□ -0.66
TCF4-207ENST00000540999 FMN2Q9NZ56 1722 aa10.94□□□□□ -0.66
TCF4-207ENST00000540999 NRKQ7Z2Y5 1582 aa10.93□□□□□ -0.66
TCF4-207ENST00000540999 SSFA2P28290 1259 aa10.93□□□□□ -0.66
TCF4-207ENST00000540999 NUTM2GQ5VZR2 741 aa10.93□□□□□ -0.66
TCF4-207ENST00000540999 EVI5LQ96CN4 794 aa10.93□□□□□ -0.66
TCF4-207ENST00000540999 FRAT1Q92837 279 aaPredicted RBP10.93□□□□□ -0.66
TCF4-207ENST00000540999 CT47B1P0C2W7 299 aaPredicted RBP10.92□□□□□ -0.66
TCF4-207ENST00000540999 ZSCAN20P17040 1043 aaPredicted RBP10.92□□□□□ -0.66
TCF4-207ENST00000540999 PROSER2Q86WR7 435 aaPredicted RBP10.92□□□□□ -0.66
TCF4-207ENST00000540999 MTA3Q9BTC8 594 aa10.92□□□□□ -0.66
TCF4-207ENST00000540999 BSDC1Q9NW68 430 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms