RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 GPR162Q16538 588 aa37.8■■■■□ 3.64
CHFR-218ENST00000540963 TESK2Q96S53 571 aa37.8■■■■□ 3.64
CHFR-218ENST00000540963 TFCP2L1Q9NZI6 479 aa37.8■■■■□ 3.64
CHFR-218ENST00000540963 RGPD2P0DJD1 1756 aa37.79■■■■□ 3.64
CHFR-218ENST00000540963 AMPHP49418 695 aa37.79■■■■□ 3.64
CHFR-218ENST00000540963 ZCRB1Q8TBF4 217 aaKnown RBP37.79■■■■□ 3.64
CHFR-218ENST00000540963 SYTL4Q96C24 671 aaPredicted RBP37.78■■■■□ 3.64
CHFR-218ENST00000540963 RTL1A6NKG5 1358 aa37.78■■■■□ 3.64
CHFR-218ENST00000540963 NSD2O96028 1365 aa37.78■■■■□ 3.64
CHFR-218ENST00000540963 CGNL1Q0VF96 1302 aa37.75■■■■□ 3.63
CHFR-218ENST00000540963 MEGF6O75095 1541 aa37.73■■■■□ 3.63
CHFR-218ENST00000540963 C1QTNF8P60827 252 aa37.73■■■■□ 3.63
CHFR-218ENST00000540963 ST20-MTHFSA0A0A6YYL1 179 aa37.72■■■■□ 3.63
CHFR-218ENST00000540963 HMGB2P26583 209 aaKnown RBP37.7■■■■□ 3.63
CHFR-218ENST00000540963 KCNQ4P56696 695 aa37.69■■■■□ 3.62
CHFR-218ENST00000540963 KLHL34Q8N239 644 aa37.69■■■■□ 3.62
CHFR-218ENST00000540963 CCNL1Q9UK58 526 aaPredicted RBP37.69■■■■□ 3.62
CHFR-218ENST00000540963 USP47Q96K76 1375 aa37.68■■■■□ 3.62
CHFR-218ENST00000540963 FBLN1P23142 703 aa37.66■■■■□ 3.62
CHFR-218ENST00000540963 GOLGB1Q14789 3259 aaKnown RBP37.65■■■■□ 3.62
CHFR-218ENST00000540963 SMG6Q86US8 1419 aaKnown RBP37.65■■■■□ 3.62
CHFR-218ENST00000540963 NBPF6Q5VWK0 638 aa37.64■■■■□ 3.62
CHFR-218ENST00000540963 NBPF4Q96M43 638 aa37.64■■■■□ 3.62
CHFR-218ENST00000540963 SENP3-EIF4A1A0A087X0R7 540 aa37.63■■■■□ 3.61
CHFR-218ENST00000540963 RAPGEF4Q8WZA2 1011 aa37.63■■■■□ 3.61
CHFR-218ENST00000540963 FYB1O15117 783 aa37.61■■■■□ 3.61
CHFR-218ENST00000540963 NLGN2Q8NFZ4 835 aa37.61■■■■□ 3.61
CHFR-218ENST00000540963 KIF24Q5T7B8 1368 aa37.59■■■■□ 3.61
CHFR-218ENST00000540963 GRIN3BO60391 1043 aa37.59■■■■□ 3.61
CHFR-218ENST00000540963 RRS1Q15050 365 aaKnown RBP37.59■■■■□ 3.61
CHFR-218ENST00000540963 PELP1Q8IZL8 1130 aaKnown RBP37.59■■■■□ 3.61
CHFR-218ENST00000540963 C5P01031 1676 aa37.58■■■■□ 3.61
CHFR-218ENST00000540963 COL23A1Q86Y22 540 aaPredicted RBP37.58■■■■□ 3.61
CHFR-218ENST00000540963 TATP17735 454 aaPredicted RBP37.57■■■■□ 3.6
CHFR-218ENST00000540963 INSRP06213 1382 aa37.56■■■■□ 3.6
CHFR-218ENST00000540963 GIGYF1O75420 1035 aaPredicted RBP37.56■■■■□ 3.6
CHFR-218ENST00000540963 PCDH11XQ9BZA7 1347 aa37.56■■■■□ 3.6
CHFR-218ENST00000540963 PCDH11YQ9BZA8 1340 aa37.56■■■■□ 3.6
CHFR-218ENST00000540963 FLAD1Q8NFF5 587 aa37.55■■■■□ 3.6
CHFR-218ENST00000540963 TAF1LQ8IZX4 1826 aa37.54■■■■□ 3.6
CHFR-218ENST00000540963 MSH5O43196 834 aa37.54■■■■□ 3.6
CHFR-218ENST00000540963 TMF1P82094 1093 aa37.54■■■■□ 3.6
CHFR-218ENST00000540963 GGNBP2Q9H3C7 697 aa37.54■■■■□ 3.6
CHFR-218ENST00000540963 KIF20BQ96Q89 1820 aa37.53■■■■□ 3.6
CHFR-218ENST00000540963 USHBP1Q8N6Y0 703 aa37.52■■■■□ 3.6
CHFR-218ENST00000540963 FLT4P35916 1363 aa37.52■■■■□ 3.6
CHFR-218ENST00000540963 YBX3P16989 372 aaKnown RBP eCLIP37.49■■■■□ 3.59
CHFR-218ENST00000540963 HSP90AB2PQ58FF8 381 aa37.48■■■■□ 3.59
CHFR-218ENST00000540963 CD2APQ9Y5K6 639 aa37.48■■■■□ 3.59
CHFR-218ENST00000540963 PALLDQ8WX93 1383 aa37.47■■■■□ 3.59
CHFR-218ENST00000540963 CDCA8Q53HL2 280 aa37.47■■■■□ 3.59
CHFR-218ENST00000540963 ITGB4P16144 1822 aa37.45■■■■□ 3.59
CHFR-218ENST00000540963 SMARCC1Q92922 1105 aaPredicted RBP37.44■■■■□ 3.58
CHFR-218ENST00000540963 PKD1L3Q7Z443 1732 aa37.44■■■■□ 3.58
CHFR-218ENST00000540963 MSL1Q68DK7 614 aa37.42■■■■□ 3.58
CHFR-218ENST00000540963 C4BP0C0L5 1744 aa37.41■■■■□ 3.58
CHFR-218ENST00000540963 CYP27B1O15528 508 aa37.41■■■■□ 3.58
CHFR-218ENST00000540963 MPRIPQ6WCQ1 1025 aa37.41■■■■□ 3.58
CHFR-218ENST00000540963 TOGARAM1Q9Y4F4 1720 aa37.41■■■■□ 3.58
CHFR-218ENST00000540963 NCAPD2Q15021 1401 aa37.39■■■■□ 3.58
CHFR-218ENST00000540963 NSD3Q9BZ95 1437 aa37.39■■■■□ 3.58
CHFR-218ENST00000540963 UBR3Q6ZT12 1888 aa37.37■■■■□ 3.57
CHFR-218ENST00000540963 NKX1-1Q15270 411 aaPredicted RBP37.36■■■■□ 3.57
CHFR-218ENST00000540963 AK7Q96M32 723 aa37.35■■■■□ 3.57
CHFR-218ENST00000540963 ANKRD26Q9UPS8 1709 aa37.34■■■■□ 3.57
CHFR-218ENST00000540963 MAP2P11137 1827 aaKnown RBP37.31■■■■□ 3.56
CHFR-218ENST00000540963 ATP10DQ9P241 1426 aa37.31■■■■□ 3.56
CHFR-218ENST00000540963 SPG7Q9UQ90 795 aa37.31■■■■□ 3.56
CHFR-218ENST00000540963 PIGBQ92521 554 aa37.3■■■■□ 3.56
CHFR-218ENST00000540963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.3■■■■□ 3.56
CHFR-218ENST00000540963 CARD14Q9BXL6 1004 aa37.29■■■■□ 3.56
CHFR-218ENST00000540963 EMILIN1Q9Y6C2 1016 aa37.29■■■■□ 3.56
CHFR-218ENST00000540963 SSFA2P28290 1259 aa37.28■■■■□ 3.56
CHFR-218ENST00000540963 CEP350Q5VT06 3117 aa37.26■■■■□ 3.56
CHFR-218ENST00000540963 WASHC2AQ641Q2 1341 aa37.26■■■■□ 3.56
CHFR-218ENST00000540963 ADCY9O60503 1353 aa37.26■■■■□ 3.55
CHFR-218ENST00000540963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.25■■■■□ 3.55
CHFR-218ENST00000540963 LOC102724428A0A0B4J2F2 783 aa37.24■■■■□ 3.55
CHFR-218ENST00000540963 SIK1P57059 783 aa37.24■■■■□ 3.55
CHFR-218ENST00000540963 AMIGO3Q86WK7 504 aa37.23■■■■□ 3.55
CHFR-218ENST00000540963 GPBP1L1Q9HC44 474 aaPredicted RBP37.22■■■■□ 3.55
CHFR-218ENST00000540963 PLEKHG2Q9H7P9 1386 aa37.21■■■■□ 3.55
CHFR-218ENST00000540963 TMOD3Q9NYL9 352 aa37.2■■■■□ 3.55
CHFR-218ENST00000540963 IGSF1Q8N6C5 1336 aa37.19■■■■□ 3.54
CHFR-218ENST00000540963 PHF14O94880 888 aa37.19■■■■□ 3.54
CHFR-218ENST00000540963 PPM1GO15355 546 aaPredicted RBP37.18■■■■□ 3.54
CHFR-218ENST00000540963 EYA1Q99502 592 aa37.18■■■■□ 3.54
CHFR-218ENST00000540963 LINC00116Q8NCU8 138 aa37.17■■■■□ 3.54
CHFR-218ENST00000540963 IFNL2Q8IZJ0 200 aa37.16■■■■□ 3.54
CHFR-218ENST00000540963 PHKG2P15735 406 aa37.13■■■■□ 3.53
CHFR-218ENST00000540963 ASAP1Q9ULH1 1129 aa37.12■■■■□ 3.53
CHFR-218ENST00000540963 ATP6V1AP38606 617 aa37.11■■■■□ 3.53
CHFR-218ENST00000540963 ZNF831Q5JPB2 1677 aa37.11■■■■□ 3.53
CHFR-218ENST00000540963 GNPATO15228 680 aa37.1■■■■□ 3.53
CHFR-218ENST00000540963 ITPK1Q13572 414 aa37.1■■■■□ 3.53
CHFR-218ENST00000540963 SMIM5Q71RC9 77 aa37.1■■■■□ 3.53
CHFR-218ENST00000540963 POLKQ9UBT6 870 aa37.1■■■■□ 3.53
CHFR-218ENST00000540963 KIF13BQ9NQT8 1826 aa37.1■■■■□ 3.53
CHFR-218ENST00000540963 CICQ96RK0 1608 aaPredicted RBP37.09■■■■□ 3.53
CHFR-218ENST00000540963 IFFO2Q5TF58 517 aa37.08■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms